RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 INSRP06213 1382 aa36.22■■■■□ 3.39
COL13A1-212ENST00000520133 SRPK2P78362 688 aaKnown RBP36.22■■■■□ 3.39
COL13A1-212ENST00000520133 USP32Q8NFA0 1604 aa36.22■■■■□ 3.39
COL13A1-212ENST00000520133 ATAD2Q6PL18 1390 aa36.21■■■■□ 3.39
COL13A1-212ENST00000520133 ANKRD36BQ8N2N9 1353 aa36.2■■■■□ 3.39
COL13A1-212ENST00000520133 BCANQ96GW7 911 aa36.2■■■■□ 3.38
COL13A1-212ENST00000520133 KNDC1Q76NI1 1749 aa36.19■■■■□ 3.38
COL13A1-212ENST00000520133 METP08581 1390 aa36.17■■■■□ 3.38
COL13A1-212ENST00000520133 PLEKHG1Q9ULL1 1385 aa36.16■■■■□ 3.38
COL13A1-212ENST00000520133 NEFLP07196 543 aa36.16■■■■□ 3.38
COL13A1-212ENST00000520133 SUPT16HQ9Y5B9 1047 aaKnown RBP36.15■■■■□ 3.38
COL13A1-212ENST00000520133 PLPPR3Q6T4P5 718 aa36.15■■■■□ 3.38
COL13A1-212ENST00000520133 EID1Q9Y6B2 187 aa36.15■■■■□ 3.38
COL13A1-212ENST00000520133 SLIT1O75093 1534 aa36.14■■■■□ 3.38
COL13A1-212ENST00000520133 SIRT1Q96EB6 747 aa36.13■■■■□ 3.37
COL13A1-212ENST00000520133 CGNL1Q0VF96 1302 aa36.12■■■■□ 3.37
COL13A1-212ENST00000520133 TECPR2O15040 1411 aa36.12■■■■□ 3.37
COL13A1-212ENST00000520133 TXNDC2Q86VQ3 553 aa36.11■■■■□ 3.37
COL13A1-212ENST00000520133 ARHGAP23Q9P227 1491 aa36.11■■■■□ 3.37
COL13A1-212ENST00000520133 WAPLQ7Z5K2 1190 aa36.11■■■■□ 3.37
COL13A1-212ENST00000520133 CDK19Q9BWU1 502 aa36.11■■■■□ 3.37
COL13A1-212ENST00000520133 THEMISQ8N1K5 641 aaPredicted RBP36.1■■■■□ 3.37
COL13A1-212ENST00000520133 RIMS1Q86UR5 1692 aaKnown RBP36.1■■■■□ 3.37
COL13A1-212ENST00000520133 FAM135BQ49AJ0 1406 aa36.09■■■■□ 3.37
COL13A1-212ENST00000520133 ADAMTS13Q76LX8 1427 aa36.09■■■■□ 3.37
COL13A1-212ENST00000520133 LTKP29376 864 aa36.09■■■■□ 3.37
COL13A1-212ENST00000520133 CPS1P31327 1500 aa36.08■■■■□ 3.37
COL13A1-212ENST00000520133 BLMP54132 1417 aaPredicted RBP36.07■■■■□ 3.37
COL13A1-212ENST00000520133 NSD2O96028 1365 aa36.07■■■■□ 3.36
COL13A1-212ENST00000520133 PLEKHH1Q9ULM0 1364 aa36.07■■■■□ 3.36
COL13A1-212ENST00000520133 MORC1Q86VD1 984 aa36.06■■■■□ 3.36
COL13A1-212ENST00000520133 TERF2IPQ9NYB0 399 aa36.06■■■■□ 3.36
COL13A1-212ENST00000520133 WDR43Q15061 677 aaKnown RBP eCLIP36.05■■■■□ 3.36
COL13A1-212ENST00000520133 FKBP8Q14318 412 aa36.04■■■■□ 3.36
COL13A1-212ENST00000520133 A0A1W2PP64 1363 aa36.03■■■■□ 3.36
COL13A1-212ENST00000520133 SMG6Q86US8 1419 aaKnown RBP36.03■■■■□ 3.36
COL13A1-212ENST00000520133 ADAMTSL3P82987 1691 aa36■■■■□ 3.35
COL13A1-212ENST00000520133 MED14O60244 1454 aa36■■■■□ 3.35
COL13A1-212ENST00000520133 ADAMTS8Q9UP79 889 aa35.98■■■■□ 3.35
COL13A1-212ENST00000520133 CEP170BQ9Y4F5 1589 aaPredicted RBP35.98■■■■□ 3.35
COL13A1-212ENST00000520133 HDGFL2Q7Z4V5 671 aaPredicted RBP35.97■■■■□ 3.35
COL13A1-212ENST00000520133 NUDCQ9Y266 331 aa35.97■■■■□ 3.35
COL13A1-212ENST00000520133 WASLO00401 505 aaPredicted RBP35.95■■■■□ 3.35
COL13A1-212ENST00000520133 CD163L1Q9NR16 1453 aa35.95■■■■□ 3.35
COL13A1-212ENST00000520133 POLR3AO14802 1390 aaPredicted RBP35.94■■■■□ 3.34
COL13A1-212ENST00000520133 DIP2AQ14689 1571 aa35.93■■■■□ 3.34
COL13A1-212ENST00000520133 CABP1Q9NZU7 370 aa35.92■■■■□ 3.34
COL13A1-212ENST00000520133 SENP3-EIF4A1A0A087X0R7 540 aa35.92■■■■□ 3.34
COL13A1-212ENST00000520133 PDE3BQ13370 1112 aa35.92■■■■□ 3.34
COL13A1-212ENST00000520133 TBX22Q9Y458 520 aa35.92■■■■□ 3.34
COL13A1-212ENST00000520133 SETD1BQ9UPS6 1966 aaKnown RBP35.91■■■■□ 3.34
COL13A1-212ENST00000520133 ATP7BP35670 1465 aa35.91■■■■□ 3.34
COL13A1-212ENST00000520133 SLC26A8Q96RN1 970 aa35.9■■■■□ 3.34
COL13A1-212ENST00000520133 ROBO2Q9HCK4 1378 aa35.89■■■■□ 3.34
COL13A1-212ENST00000520133 ANKRD26Q9UPS8 1709 aa35.89■■■■□ 3.34
COL13A1-212ENST00000520133 ZNF142P52746 1687 aaPredicted RBP35.86■■■■□ 3.33
COL13A1-212ENST00000520133 TNNT2P45379 298 aaPredicted RBP35.85■■■■□ 3.33
COL13A1-212ENST00000520133 ADGRB2O60241 1585 aa35.85■■■■□ 3.33
COL13A1-212ENST00000520133 SALL2Q9Y467 1007 aaPredicted RBP35.84■■■■□ 3.33
COL13A1-212ENST00000520133 KIF20BQ96Q89 1820 aa35.83■■■■□ 3.33
COL13A1-212ENST00000520133 PTPRUQ92729 1446 aa35.82■■■■□ 3.33
COL13A1-212ENST00000520133 PPIP5K1Q6PFW1 1433 aa35.81■■■■□ 3.32
COL13A1-212ENST00000520133 CFAP53Q96M91 514 aa35.8■■■■□ 3.32
COL13A1-212ENST00000520133 NUDT16Q96DE0 195 aaKnown RBP35.8■■■■□ 3.32
COL13A1-212ENST00000520133 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.8■■■■□ 3.32
COL13A1-212ENST00000520133 FYB1O15117 783 aa35.79■■■■□ 3.32
COL13A1-212ENST00000520133 AMOTL2Q9Y2J4 779 aa35.79■■■■□ 3.32
COL13A1-212ENST00000520133 CCDC61Q9Y6R9 512 aa35.78■■■■□ 3.32
COL13A1-212ENST00000520133 MTHFSP49914 203 aa35.78■■■■□ 3.32
COL13A1-212ENST00000520133 GGNBP2Q9H3C7 697 aa35.78■■■■□ 3.32
COL13A1-212ENST00000520133 PTCH1Q13635 1447 aa35.77■■■■□ 3.32
COL13A1-212ENST00000520133 SHPRHQ149N8 1683 aa35.76■■■■□ 3.31
COL13A1-212ENST00000520133 CPSF1Q10570 1443 aaKnown RBP35.75■■■■□ 3.31
COL13A1-212ENST00000520133 ERICH6BQ5W0A0 696 aa35.74■■■■□ 3.31
COL13A1-212ENST00000520133 CDC42BPGQ6DT37 1551 aa35.74■■■■□ 3.31
COL13A1-212ENST00000520133 PIK3R4Q99570 1358 aa35.73■■■■□ 3.31
COL13A1-212ENST00000520133 ANKLE2Q86XL3 938 aa35.72■■■■□ 3.31
COL13A1-212ENST00000520133 ITSN1Q15811 1721 aa35.71■■■■□ 3.31
COL13A1-212ENST00000520133 EDC4Q6P2E9 1401 aaKnown RBP35.71■■■■□ 3.31
COL13A1-212ENST00000520133 XRN1Q8IZH2 1706 aaKnown RBP35.7■■■■□ 3.31
COL13A1-212ENST00000520133 MON2Q7Z3U7 1717 aa35.69■■■■□ 3.3
COL13A1-212ENST00000520133 AKAP12Q02952 1782 aa35.69■■■■□ 3.3
COL13A1-212ENST00000520133 PELP1Q8IZL8 1130 aaKnown RBP35.67■■■■□ 3.3
COL13A1-212ENST00000520133 NGEFQ8N5V2 710 aa35.67■■■■□ 3.3
COL13A1-212ENST00000520133 CCDC146Q8IYE0 955 aa35.67■■■■□ 3.3
COL13A1-212ENST00000520133 ZNF692Q9BU19 519 aaPredicted RBP35.66■■■■□ 3.3
COL13A1-212ENST00000520133 SUGP2Q8IX01 1082 aaKnown RBP eCLIP35.65■■■■□ 3.3
COL13A1-212ENST00000520133 PRR36Q9H6K5 1346 aa35.65■■■■□ 3.3
COL13A1-212ENST00000520133 TOPAZ1Q8N9V7 1692 aa35.65■■■■□ 3.3
COL13A1-212ENST00000520133 IRX6P78412 446 aaPredicted RBP35.64■■■■□ 3.3
COL13A1-212ENST00000520133 RNF123Q5XPI4 1314 aa35.64■■■■□ 3.3
COL13A1-212ENST00000520133 CDCA7LQ96GN5 454 aa35.62■■■■□ 3.29
COL13A1-212ENST00000520133 APAF1O14727 1248 aa35.61■■■■□ 3.29
COL13A1-212ENST00000520133 ZNF521Q96K83 1311 aa35.6■■■■□ 3.29
COL13A1-212ENST00000520133 NCKAP5LQ9HCH0 1330 aa35.6■■■■□ 3.29
COL13A1-212ENST00000520133 CHD2O14647 1828 aaKnown RBP35.57■■■■□ 3.28
COL13A1-212ENST00000520133 PLEKHG3A1L390 1219 aa35.56■■■■□ 3.28
COL13A1-212ENST00000520133 GOLGA2Q08379 1002 aa35.56■■■■□ 3.28
COL13A1-212ENST00000520133 RUNDC1Q96C34 613 aa35.55■■■■□ 3.28
COL13A1-212ENST00000520133 KCNA6P17658 529 aa35.55■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms