RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 KCNA6P17658 529 aa13.33□□□□□ -0.28
PABPC1-213ENST00000519848 NALCNQ8IZF0 1738 aa13.31□□□□□ -0.28
PABPC1-213ENST00000519848 RGS17Q9UGC6 210 aaPredicted RBP13.31□□□□□ -0.28
PABPC1-213ENST00000519848 FAM135BQ49AJ0 1406 aa13.3□□□□□ -0.28
PABPC1-213ENST00000519848 PHLPP1O60346 1717 aa13.3□□□□□ -0.28
PABPC1-213ENST00000519848 HFM1A2PYH4 1435 aa13.3□□□□□ -0.28
PABPC1-213ENST00000519848 CREBZFQ9NS37 354 aa13.29□□□□□ -0.28
PABPC1-213ENST00000519848 LRP6O75581 1613 aa13.28□□□□□ -0.28
PABPC1-213ENST00000519848 CHGAP10645 457 aaKnown RBP13.28□□□□□ -0.28
PABPC1-213ENST00000519848 PROSER2Q86WR7 435 aaPredicted RBP13.28□□□□□ -0.28
PABPC1-213ENST00000519848 METP08581 1390 aa13.28□□□□□ -0.28
PABPC1-213ENST00000519848 PPLO60437 1756 aa13.27□□□□□ -0.29
PABPC1-213ENST00000519848 KIF1BO60333 1816 aa13.26□□□□□ -0.29
PABPC1-213ENST00000519848 IFT172Q9UG01 1749 aa13.25□□□□□ -0.29
PABPC1-213ENST00000519848 TBX22Q9Y458 520 aa13.25□□□□□ -0.29
PABPC1-213ENST00000519848 AHDC1Q5TGY3 1603 aaPredicted RBP13.24□□□□□ -0.29
PABPC1-213ENST00000519848 ASXL1Q8IXJ9 1541 aa13.24□□□□□ -0.29
PABPC1-213ENST00000519848 PELP1Q8IZL8 1130 aaKnown RBP13.24□□□□□ -0.29
PABPC1-213ENST00000519848 PPP1R15AO75807 674 aaPredicted RBP13.23□□□□□ -0.29
PABPC1-213ENST00000519848 MSH6P52701 1360 aa13.22□□□□□ -0.29
PABPC1-213ENST00000519848 NHSL1Q5SYE7 1610 aa13.22□□□□□ -0.29
PABPC1-213ENST00000519848 BCANQ96GW7 911 aa13.21□□□□□ -0.29
PABPC1-213ENST00000519848 SHPRHQ149N8 1683 aa13.21□□□□□ -0.3
PABPC1-213ENST00000519848 MST1RQ04912 1400 aa13.21□□□□□ -0.3
PABPC1-213ENST00000519848 PIK3R4Q99570 1358 aa13.2□□□□□ -0.3
PABPC1-213ENST00000519848 POTEAQ6S8J7 498 aa13.19□□□□□ -0.3
PABPC1-213ENST00000519848 PHF12Q96QT6 1004 aa13.19□□□□□ -0.3
PABPC1-213ENST00000519848 SLAIN2Q9P270 581 aa13.19□□□□□ -0.3
PABPC1-213ENST00000519848 PCDH10Q9P2E7 1040 aa13.18□□□□□ -0.3
PABPC1-213ENST00000519848 AMOTL2Q9Y2J4 779 aa13.18□□□□□ -0.3
PABPC1-213ENST00000519848 NCOA3Q9Y6Q9 1424 aa13.18□□□□□ -0.3
PABPC1-213ENST00000519848 SPATA31E1Q6ZUB1 1445 aa13.17□□□□□ -0.3
PABPC1-213ENST00000519848 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.17□□□□□ -0.3
PABPC1-213ENST00000519848 ROBO2Q9HCK4 1378 aa13.17□□□□□ -0.3
PABPC1-213ENST00000519848 PRAG1Q86YV5 1406 aa13.16□□□□□ -0.3
PABPC1-213ENST00000519848 ADGRL3Q9HAR2 1447 aa13.16□□□□□ -0.3
PABPC1-213ENST00000519848 DCCP43146 1447 aa13.15□□□□□ -0.3
PABPC1-213ENST00000519848 LAMC1P11047 1609 aa13.15□□□□□ -0.3
PABPC1-213ENST00000519848 POTEJP0CG39 1038 aa13.15□□□□□ -0.3
PABPC1-213ENST00000519848 BRINP3Q76B58 766 aa13.15□□□□□ -0.3
PABPC1-213ENST00000519848 DDX17Q92841 729 aaKnown RBP13.15□□□□□ -0.3
PABPC1-213ENST00000519848 PTCH1Q13635 1447 aa13.13□□□□□ -0.31
PABPC1-213ENST00000519848 ZNF326Q5BKZ1 582 aaKnown RBP13.13□□□□□ -0.31
PABPC1-213ENST00000519848 JCADQ9P266 1359 aa13.12□□□□□ -0.31
PABPC1-213ENST00000519848 TRIM52Q96A61 297 aa13.12□□□□□ -0.31
PABPC1-213ENST00000519848 ADGRF5Q8IZF2 1346 aa13.12□□□□□ -0.31
PABPC1-213ENST00000519848 KNDC1Q76NI1 1749 aa13.11□□□□□ -0.31
PABPC1-213ENST00000519848 LCE2DQ5TA82 110 aaPredicted RBP13.11□□□□□ -0.31
PABPC1-213ENST00000519848 C19orf44Q9H6X5 657 aa13.11□□□□□ -0.31
PABPC1-213ENST00000519848 C1orf167Q5SNV9 1468 aa13.1□□□□□ -0.31
PABPC1-213ENST00000519848 PLEKHH1Q9ULM0 1364 aa13.09□□□□□ -0.31
PABPC1-213ENST00000519848 CDC42BPGQ6DT37 1551 aa13.09□□□□□ -0.31
PABPC1-213ENST00000519848 PIK3C2GO75747 1445 aa13.08□□□□□ -0.32
PABPC1-213ENST00000519848 SETD5Q9C0A6 1442 aa13.08□□□□□ -0.32
PABPC1-213ENST00000519848 HDGFP51858 240 aaKnown RBP13.08□□□□□ -0.32
PABPC1-213ENST00000519848 C14orf37Q86TY3 774 aa13.08□□□□□ -0.32
PABPC1-213ENST00000519848 PAK3O75914 559 aaPredicted RBP13.07□□□□□ -0.32
PABPC1-213ENST00000519848 CADPS2Q86UW7 1296 aa13.07□□□□□ -0.32
PABPC1-213ENST00000519848 METRNQ9UJH8 293 aa13.07□□□□□ -0.32
PABPC1-213ENST00000519848 NRXN1Q9ULB1 1477 aa13.07□□□□□ -0.32
PABPC1-213ENST00000519848 PNPLA6Q8IY17 1366 aa13.07□□□□□ -0.32
PABPC1-213ENST00000519848 FMN2Q9NZ56 1722 aa13.06□□□□□ -0.32
PABPC1-213ENST00000519848 ASTLQ6HA08 431 aaPredicted RBP13.06□□□□□ -0.32
PABPC1-213ENST00000519848 TECPR2O15040 1411 aa13.05□□□□□ -0.32
PABPC1-213ENST00000519848 ATF3P18847 181 aa13.05□□□□□ -0.32
PABPC1-213ENST00000519848 MPHOSPH9Q99550 1183 aa13.05□□□□□ -0.32
PABPC1-213ENST00000519848 RAB3GAP2Q9H2M9 1393 aa13.05□□□□□ -0.32
PABPC1-213ENST00000519848 CCDC144AA2RUR9 1427 aa13.05□□□□□ -0.32
PABPC1-213ENST00000519848 RGPD8O14715 1765 aaPredicted RBP13.04□□□□□ -0.32
PABPC1-213ENST00000519848 COL22A1Q8NFW1 1626 aaPredicted RBP13.04□□□□□ -0.32
PABPC1-213ENST00000519848 ORAI2Q96SN7 254 aa13.04□□□□□ -0.32
PABPC1-213ENST00000519848 PXDNQ92626 1479 aa13.04□□□□□ -0.32
PABPC1-213ENST00000519848 USP32Q8NFA0 1604 aa13.03□□□□□ -0.32
PABPC1-213ENST00000519848 ADGRB1O14514 1584 aa13.03□□□□□ -0.32
PABPC1-213ENST00000519848 ATMINO43313 823 aaPredicted RBP13.01□□□□□ -0.33
PABPC1-213ENST00000519848 MNX1P50219 401 aaPredicted RBP13.01□□□□□ -0.33
PABPC1-213ENST00000519848 RGL3Q3MIN7 710 aa13.01□□□□□ -0.33
PABPC1-213ENST00000519848 TMEM132EQ6IEE7 984 aa13.01□□□□□ -0.33
PABPC1-213ENST00000519848 SPATA31A6Q5VVP1 1343 aa13.01□□□□□ -0.33
PABPC1-213ENST00000519848 MYOM2P54296 1465 aa13.01□□□□□ -0.33
PABPC1-213ENST00000519848 LRPPRCP42704 1394 aaKnown RBP13□□□□□ -0.33
PABPC1-213ENST00000519848 RPGRIP1LQ68CZ1 1315 aa13□□□□□ -0.33
PABPC1-213ENST00000519848 C7P10643 843 aa13□□□□□ -0.33
PABPC1-213ENST00000519848 WAPLQ7Z5K2 1190 aa13□□□□□ -0.33
PABPC1-213ENST00000519848 SLC39A7Q92504 469 aa13□□□□□ -0.33
PABPC1-213ENST00000519848 ABCA3Q99758 1704 aa12.99□□□□□ -0.33
PABPC1-213ENST00000519848 NUTM2BA6NNL0 878 aaPredicted RBP12.99□□□□□ -0.33
PABPC1-213ENST00000519848 NUTM2EB1AL46 878 aaPredicted RBP12.99□□□□□ -0.33
PABPC1-213ENST00000519848 VGFO15240 615 aaPredicted RBP12.99□□□□□ -0.33
PABPC1-213ENST00000519848 NUTM2AQ8IVF1 878 aaPredicted RBP12.99□□□□□ -0.33
PABPC1-213ENST00000519848 MS4A3Q96HJ5 214 aa12.99□□□□□ -0.33
PABPC1-213ENST00000519848 MARF1Q9Y4F3 1742 aaKnown RBP12.99□□□□□ -0.33
PABPC1-213ENST00000519848 RGS12O14924 1447 aa12.98□□□□□ -0.33
PABPC1-213ENST00000519848 YTHDC2Q9H6S0 1430 aaKnown RBP12.98□□□□□ -0.33
PABPC1-213ENST00000519848 SOS2Q07890 1332 aaPredicted RBP12.98□□□□□ -0.33
PABPC1-213ENST00000519848 ANKRD30BQ9BXX2 1392 aa12.96□□□□□ -0.33
PABPC1-213ENST00000519848 AFF2P51816 1311 aa12.96□□□□□ -0.33
PABPC1-213ENST00000519848 XPCQ01831 940 aaPredicted RBP12.96□□□□□ -0.33
PABPC1-213ENST00000519848 MAMSTRQ6ZN01 415 aa12.96□□□□□ -0.33
PABPC1-213ENST00000519848 FAM163AQ96GL9 167 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms