RNA–Protein interactions for RNA: ENST00000519802.5

PCM1-213, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-213ENST00000519802 DACH1Q9UI36 760 aa10.91□□□□□ -0.66
PCM1-213ENST00000519802 Q3C1V9 767 aa10.9□□□□□ -0.66
PCM1-213ENST00000519802 BCANQ96GW7 911 aa10.9□□□□□ -0.66
PCM1-213ENST00000519802 MMP16P51512 607 aa10.89□□□□□ -0.67
PCM1-213ENST00000519802 CTC1Q2NKJ3 1217 aa10.89□□□□□ -0.67
PCM1-213ENST00000519802 AXIN1O15169 862 aa10.88□□□□□ -0.67
PCM1-213ENST00000519802 SMCPP49901 116 aaPredicted RBP10.88□□□□□ -0.67
PCM1-213ENST00000519802 MAP2K5Q13163 448 aa10.88□□□□□ -0.67
PCM1-213ENST00000519802 LCE2AQ5TA79 106 aaPredicted RBP10.88□□□□□ -0.67
PCM1-213ENST00000519802 TREML4Q6UXN2 200 aa10.88□□□□□ -0.67
PCM1-213ENST00000519802 WNT7AO00755 349 aa10.87□□□□□ -0.67
PCM1-213ENST00000519802 TTC24A2A3L6 582 aaPredicted RBP10.86□□□□□ -0.67
PCM1-213ENST00000519802 KDM4AO75164 1064 aa10.86□□□□□ -0.67
PCM1-213ENST00000519802 TRIM32Q13049 653 aa10.86□□□□□ -0.67
PCM1-213ENST00000519802 GMPR2Q9P2T1 348 aaKnown RBP10.86□□□□□ -0.67
PCM1-213ENST00000519802 USB1Q9BQ65 265 aaKnown RBP10.85□□□□□ -0.67
PCM1-213ENST00000519802 IRF6O14896 467 aa10.84□□□□□ -0.67
PCM1-213ENST00000519802 DXOO77932 396 aaKnown RBP10.84□□□□□ -0.67
PCM1-213ENST00000519802 SMPD1P17405 629 aa10.83□□□□□ -0.68
PCM1-213ENST00000519802 SNIP1Q8TAD8 396 aaKnown RBP10.83□□□□□ -0.68
PCM1-213ENST00000519802 C11orf95C9JLR9 678 aaPredicted RBP10.82□□□□□ -0.68
PCM1-213ENST00000519802 MDM2Q00987 491 aaPredicted RBP10.82□□□□□ -0.68
PCM1-213ENST00000519802 HLA-CQ95604 372 aa10.82□□□□□ -0.68
PCM1-213ENST00000519802 USP46P62068 366 aa10.81□□□□□ -0.68
PCM1-213ENST00000519802 MRGPRX2Q96LB1 330 aa10.81□□□□□ -0.68
PCM1-213ENST00000519802 MINK1Q8N4C8 1332 aaPredicted RBP10.8□□□□□ -0.68
PCM1-213ENST00000519802 J3QL48 77 aa10.78□□□□□ -0.68
PCM1-213ENST00000519802 HOXA2O43364 376 aa10.78□□□□□ -0.68
PCM1-213ENST00000519802 TULP1O00294 542 aaPredicted RBP10.76□□□□□ -0.69
PCM1-213ENST00000519802 CCDC24Q8N4L8 307 aa10.76□□□□□ -0.69
PCM1-213ENST00000519802 CCDC102AQ96A19 550 aa10.76□□□□□ -0.69
PCM1-213ENST00000519802 REPIN1Q9BWE0 567 aaKnown RBP10.76□□□□□ -0.69
PCM1-213ENST00000519802 ATP13A2Q9NQ11 1180 aa10.76□□□□□ -0.69
PCM1-213ENST00000519802 WFS1O76024 890 aa10.75□□□□□ -0.69
PCM1-213ENST00000519802 SKOR1P84550 965 aa10.74□□□□□ -0.69
PCM1-213ENST00000519802 GUCA2AQ02747 115 aa10.74□□□□□ -0.69
PCM1-213ENST00000519802 RC3H1Q5TC82 1133 aaKnown RBP10.74□□□□□ -0.69
PCM1-213ENST00000519802 WNT7BP56706 349 aa10.73□□□□□ -0.69
PCM1-213ENST00000519802 NFX1Q12986 1120 aaKnown RBP10.73□□□□□ -0.69
PCM1-213ENST00000519802 HPS1Q92902 700 aa10.73□□□□□ -0.69
PCM1-213ENST00000519802 GPCPD1Q9NPB8 672 aa10.73□□□□□ -0.69
PCM1-213ENST00000519802 FAM217BQ9NTX9 383 aaPredicted RBP10.73□□□□□ -0.69
PCM1-213ENST00000519802 JUNDP17535 347 aa10.72□□□□□ -0.69
PCM1-213ENST00000519802 CLCN1P35523 988 aa10.72□□□□□ -0.69
PCM1-213ENST00000519802 SNRPBP14678 240 aaKnown RBP10.71□□□□□ -0.69
PCM1-213ENST00000519802 SYMPKQ92797 1274 aaKnown RBP10.71□□□□□ -0.69
PCM1-213ENST00000519802 TRIM47Q96LD4 638 aa10.69□□□□□ -0.7
PCM1-213ENST00000519802 SENP2Q9HC62 589 aa10.69□□□□□ -0.7
PCM1-213ENST00000519802 RETREG3Q86VR2 466 aa10.68□□□□□ -0.7
PCM1-213ENST00000519802 NUTM1Q86Y26 1132 aa10.68□□□□□ -0.7
PCM1-213ENST00000519802 PTCRAQ6ISU1 281 aaPredicted RBP10.66□□□□□ -0.7
PCM1-213ENST00000519802 NUDT12Q9BQG2 462 aa10.66□□□□□ -0.7
PCM1-213ENST00000519802 WIPF1O43516 503 aa10.65□□□□□ -0.7
PCM1-213ENST00000519802 ALDH1A1P00352 501 aa10.65□□□□□ -0.7
PCM1-213ENST00000519802 TERTO14746 1132 aaKnown RBP10.64□□□□□ -0.71
PCM1-213ENST00000519802 FDX1P10109 184 aa10.64□□□□□ -0.71
PCM1-213ENST00000519802 LCE2CQ5TA81 110 aa10.64□□□□□ -0.71
PCM1-213ENST00000519802 KRI1Q8N9T8 703 aaKnown RBP10.64□□□□□ -0.71
PCM1-213ENST00000519802 KIFC2Q96AC6 838 aa10.64□□□□□ -0.71
PCM1-213ENST00000519802 PCDHGC3Q9UN70 934 aa10.64□□□□□ -0.71
PCM1-213ENST00000519802 SIAH2O43255 324 aa10.63□□□□□ -0.71
PCM1-213ENST00000519802 C6orf229H3BNL8 230 aa10.61□□□□□ -0.71
PCM1-213ENST00000519802 EHBP1Q8NDI1 1231 aa10.61□□□□□ -0.71
PCM1-213ENST00000519802 PRKCSHP14314 528 aaPredicted RBP10.6□□□□□ -0.71
PCM1-213ENST00000519802 CCNYL3P0C7X3 344 aa10.59□□□□□ -0.71
PCM1-213ENST00000519802 MS4A1P11836 297 aa10.59□□□□□ -0.71
PCM1-213ENST00000519802 SSTR3P32745 418 aaPredicted RBP10.59□□□□□ -0.71
PCM1-213ENST00000519802 SH3BP2P78314 561 aa10.59□□□□□ -0.71
PCM1-213ENST00000519802 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.59□□□□□ -0.71
PCM1-213ENST00000519802 SPIRE2Q8WWL2 714 aa10.59□□□□□ -0.71
PCM1-213ENST00000519802 STK17AQ9UEE5 414 aa10.59□□□□□ -0.71
PCM1-213ENST00000519802 INSM1Q01101 510 aaPredicted RBP10.58□□□□□ -0.72
PCM1-213ENST00000519802 TPRNQ4KMQ1 711 aa10.58□□□□□ -0.72
PCM1-213ENST00000519802 NDUFV2P19404 249 aa10.56□□□□□ -0.72
PCM1-213ENST00000519802 PTPRNQ16849 979 aa10.56□□□□□ -0.72
PCM1-213ENST00000519802 EVA1BQ9NVM1 165 aa10.56□□□□□ -0.72
PCM1-213ENST00000519802 WASF2Q9Y6W5 498 aa10.56□□□□□ -0.72
PCM1-213ENST00000519802 CAPN5O15484 640 aaPredicted RBP10.55□□□□□ -0.72
PCM1-213ENST00000519802 TRIM46Q7Z4K8 759 aa10.55□□□□□ -0.72
PCM1-213ENST00000519802 UNC93B1Q9H1C4 597 aa10.55□□□□□ -0.72
PCM1-213ENST00000519802 MOXD2PA6NHM9 499 aa10.54□□□□□ -0.72
PCM1-213ENST00000519802 BMP1P13497 986 aa10.54□□□□□ -0.72
PCM1-213ENST00000519802 PRR7Q8TB68 274 aa10.53□□□□□ -0.72
PCM1-213ENST00000519802 KCNH2Q12809 1159 aa10.52□□□□□ -0.73
PCM1-213ENST00000519802 LINC01559Q495D7 138 aa10.52□□□□□ -0.73
PCM1-213ENST00000519802 BAP1Q92560 729 aa10.52□□□□□ -0.73
PCM1-213ENST00000519802 TTLL12Q14166 644 aaPredicted RBP10.51□□□□□ -0.73
PCM1-213ENST00000519802 AMHR2Q16671 573 aa10.51□□□□□ -0.73
PCM1-213ENST00000519802 BARGINQ6ZT62 677 aa10.51□□□□□ -0.73
PCM1-213ENST00000519802 NXF1Q9UBU9 619 aaKnown RBP10.51□□□□□ -0.73
PCM1-213ENST00000519802 MTMR2Q13614 643 aa10.5□□□□□ -0.73
PCM1-213ENST00000519802 DESI1Q6ICB0 168 aa10.5□□□□□ -0.73
PCM1-213ENST00000519802 TLL2Q9Y6L7 1015 aa10.5□□□□□ -0.73
PCM1-213ENST00000519802 SPDYE5A6NIY4 337 aa10.49□□□□□ -0.73
PCM1-213ENST00000519802 ZMYND10O75800 440 aa10.49□□□□□ -0.73
PCM1-213ENST00000519802 GIGYF2Q6Y7W6 1299 aaKnown RBP10.49□□□□□ -0.73
PCM1-213ENST00000519802 ZNF511Q8NB15 262 aa10.49□□□□□ -0.73
PCM1-213ENST00000519802 SLC16A10Q8TF71 515 aa10.49□□□□□ -0.73
PCM1-213ENST00000519802 VARSP26640 1264 aaKnown RBP10.48□□□□□ -0.73
PCM1-213ENST00000519802 MPNDQ8N594 471 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms