RNA–Protein interactions for RNA: ENST00000519575.5

PDGFRB-205, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 712 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-205ENST00000519575 NEFLP07196 543 aa13.6□□□□□ -0.23
PDGFRB-205ENST00000519575 AMER1Q5JTC6 1135 aaPredicted RBP13.6□□□□□ -0.23
PDGFRB-205ENST00000519575 THEMISQ8N1K5 641 aaPredicted RBP13.6□□□□□ -0.23
PDGFRB-205ENST00000519575 PNISRQ8TF01 805 aaKnown RBP13.6□□□□□ -0.23
PDGFRB-205ENST00000519575 RIMS1Q86UR5 1692 aaKnown RBP13.59□□□□□ -0.23
PDGFRB-205ENST00000519575 NUTM2DQ5VT03 806 aaPredicted RBP13.59□□□□□ -0.23
PDGFRB-205ENST00000519575 ADAMTSL3P82987 1691 aa13.59□□□□□ -0.23
PDGFRB-205ENST00000519575 CGNL1Q0VF96 1302 aa13.59□□□□□ -0.23
PDGFRB-205ENST00000519575 CEP170BQ9Y4F5 1589 aaPredicted RBP13.58□□□□□ -0.23
PDGFRB-205ENST00000519575 TERF2IPQ9NYB0 399 aa13.58□□□□□ -0.24
PDGFRB-205ENST00000519575 ANKRD26Q9UPS8 1709 aa13.57□□□□□ -0.24
PDGFRB-205ENST00000519575 CC2D1BQ5T0F9 858 aaKnown RBP13.57□□□□□ -0.24
PDGFRB-205ENST00000519575 ADGRB2O60241 1585 aa13.57□□□□□ -0.24
PDGFRB-205ENST00000519575 NSD3Q9BZ95 1437 aa13.56□□□□□ -0.24
PDGFRB-205ENST00000519575 ATP7BP35670 1465 aa13.56□□□□□ -0.24
PDGFRB-205ENST00000519575 PRAM1Q96QH2 718 aa13.56□□□□□ -0.24
PDGFRB-205ENST00000519575 MED14O60244 1454 aa13.55□□□□□ -0.24
PDGFRB-205ENST00000519575 SRPK2P78362 688 aaKnown RBP13.55□□□□□ -0.24
PDGFRB-205ENST00000519575 PELP1Q8IZL8 1130 aaKnown RBP13.55□□□□□ -0.24
PDGFRB-205ENST00000519575 STK26Q9P289 416 aa13.55□□□□□ -0.24
PDGFRB-205ENST00000519575 PIK3R4Q99570 1358 aa13.55□□□□□ -0.24
PDGFRB-205ENST00000519575 CCDC184Q52MB2 194 aa13.54□□□□□ -0.24
PDGFRB-205ENST00000519575 NGEFQ8N5V2 710 aa13.54□□□□□ -0.24
PDGFRB-205ENST00000519575 BLMP54132 1417 aaPredicted RBP13.54□□□□□ -0.24
PDGFRB-205ENST00000519575 PPP2R1AP30153 589 aa13.53□□□□□ -0.24
PDGFRB-205ENST00000519575 PDE3BQ13370 1112 aa13.53□□□□□ -0.24
PDGFRB-205ENST00000519575 WDR43Q15061 677 aaKnown RBP eCLIP13.53□□□□□ -0.24
PDGFRB-205ENST00000519575 HDGFL2Q7Z4V5 671 aaPredicted RBP13.53□□□□□ -0.24
PDGFRB-205ENST00000519575 BCANQ96GW7 911 aa13.53□□□□□ -0.24
PDGFRB-205ENST00000519575 PTCH1Q13635 1447 aa13.53□□□□□ -0.24
PDGFRB-205ENST00000519575 KIF20BQ96Q89 1820 aa13.53□□□□□ -0.24
PDGFRB-205ENST00000519575 ADAMTS13Q76LX8 1427 aa13.52□□□□□ -0.25
PDGFRB-205ENST00000519575 SMG6Q86US8 1419 aaKnown RBP13.51□□□□□ -0.25
PDGFRB-205ENST00000519575 POLR3AO14802 1390 aaPredicted RBP13.51□□□□□ -0.25
PDGFRB-205ENST00000519575 CNGB1Q14028 1251 aaPredicted RBP13.51□□□□□ -0.25
PDGFRB-205ENST00000519575 TXNDC2Q86VQ3 553 aa13.51□□□□□ -0.25
PDGFRB-205ENST00000519575 TBX22Q9Y458 520 aa13.51□□□□□ -0.25
PDGFRB-205ENST00000519575 ITSN1Q15811 1721 aa13.5□□□□□ -0.25
PDGFRB-205ENST00000519575 METP08581 1390 aa13.5□□□□□ -0.25
PDGFRB-205ENST00000519575 MINK1Q8N4C8 1332 aaPredicted RBP13.5□□□□□ -0.25
PDGFRB-205ENST00000519575 ERICH6BQ5W0A0 696 aa13.5□□□□□ -0.25
PDGFRB-205ENST00000519575 CFAP53Q96M91 514 aa13.5□□□□□ -0.25
PDGFRB-205ENST00000519575 MORC1Q86VD1 984 aa13.49□□□□□ -0.25
PDGFRB-205ENST00000519575 CDK19Q9BWU1 502 aa13.48□□□□□ -0.25
PDGFRB-205ENST00000519575 CARD14Q9BXL6 1004 aa13.48□□□□□ -0.25
PDGFRB-205ENST00000519575 SLC12A5Q9H2X9 1139 aa13.48□□□□□ -0.25
PDGFRB-205ENST00000519575 CABP2Q9NPB3 220 aa13.48□□□□□ -0.25
PDGFRB-205ENST00000519575 XRN1Q8IZH2 1706 aaKnown RBP13.47□□□□□ -0.25
PDGFRB-205ENST00000519575 A0A1W2PP64 1363 aa13.47□□□□□ -0.25
PDGFRB-205ENST00000519575 CDC42BPGQ6DT37 1551 aa13.47□□□□□ -0.25
PDGFRB-205ENST00000519575 CEBPAP49715 358 aaPredicted RBP13.47□□□□□ -0.25
PDGFRB-205ENST00000519575 SAFB2Q14151 953 aaKnown RBP eCLIP13.47□□□□□ -0.25
PDGFRB-205ENST00000519575 WASLO00401 505 aaPredicted RBP13.46□□□□□ -0.25
PDGFRB-205ENST00000519575 MON2Q7Z3U7 1717 aa13.46□□□□□ -0.25
PDGFRB-205ENST00000519575 TOPAZ1Q8N9V7 1692 aa13.46□□□□□ -0.26
PDGFRB-205ENST00000519575 EDC4Q6P2E9 1401 aaKnown RBP13.46□□□□□ -0.26
PDGFRB-205ENST00000519575 AKAP12Q02952 1782 aa13.45□□□□□ -0.26
PDGFRB-205ENST00000519575 LTKP29376 864 aa13.44□□□□□ -0.26
PDGFRB-205ENST00000519575 ANKLE2Q86XL3 938 aa13.44□□□□□ -0.26
PDGFRB-205ENST00000519575 NUDCQ9Y266 331 aa13.44□□□□□ -0.26
PDGFRB-205ENST00000519575 CD163L1Q9NR16 1453 aa13.43□□□□□ -0.26
PDGFRB-205ENST00000519575 PPIP5K1Q6PFW1 1433 aa13.43□□□□□ -0.26
PDGFRB-205ENST00000519575 ZNF692Q9BU19 519 aaPredicted RBP13.43□□□□□ -0.26
PDGFRB-205ENST00000519575 CPSF1Q10570 1443 aaKnown RBP13.42□□□□□ -0.26
PDGFRB-205ENST00000519575 CCDC61Q9Y6R9 512 aa13.42□□□□□ -0.26
PDGFRB-205ENST00000519575 ANKARQ7Z5J8 1434 aa13.41□□□□□ -0.26
PDGFRB-205ENST00000519575 NCBP3Q53F19 620 aaKnown RBP13.41□□□□□ -0.26
PDGFRB-205ENST00000519575 ROBO2Q9HCK4 1378 aa13.41□□□□□ -0.26
PDGFRB-205ENST00000519575 PLEKHH1Q9ULM0 1364 aa13.41□□□□□ -0.26
PDGFRB-205ENST00000519575 CHD2O14647 1828 aaKnown RBP13.41□□□□□ -0.26
PDGFRB-205ENST00000519575 WAPLQ7Z5K2 1190 aa13.4□□□□□ -0.26
PDGFRB-205ENST00000519575 SUPT16HQ9Y5B9 1047 aaKnown RBP13.4□□□□□ -0.26
PDGFRB-205ENST00000519575 SHPRHQ149N8 1683 aa13.4□□□□□ -0.26
PDGFRB-205ENST00000519575 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.39□□□□□ -0.27
PDGFRB-205ENST00000519575 PNNQ9H307 717 aaKnown RBP13.39□□□□□ -0.27
PDGFRB-205ENST00000519575 NUDT16Q96DE0 195 aaKnown RBP13.38□□□□□ -0.27
PDGFRB-205ENST00000519575 CABP1Q9NZU7 370 aa13.38□□□□□ -0.27
PDGFRB-205ENST00000519575 AMOTL2Q9Y2J4 779 aa13.38□□□□□ -0.27
PDGFRB-205ENST00000519575 ADAMTS8Q9UP79 889 aa13.37□□□□□ -0.27
PDGFRB-205ENST00000519575 PTPRUQ92729 1446 aa13.37□□□□□ -0.27
PDGFRB-205ENST00000519575 NRKQ7Z2Y5 1582 aa13.37□□□□□ -0.27
PDGFRB-205ENST00000519575 FKBP8Q14318 412 aa13.36□□□□□ -0.27
PDGFRB-205ENST00000519575 SLC26A8Q96RN1 970 aa13.36□□□□□ -0.27
PDGFRB-205ENST00000519575 SENP3Q9H4L4 574 aaPredicted RBP13.36□□□□□ -0.27
PDGFRB-205ENST00000519575 FMN2Q9NZ56 1722 aa13.36□□□□□ -0.27
PDGFRB-205ENST00000519575 AATKQ6ZMQ8 1374 aa13.35□□□□□ -0.27
PDGFRB-205ENST00000519575 PLEKHG3A1L390 1219 aa13.35□□□□□ -0.27
PDGFRB-205ENST00000519575 FYB1O15117 783 aa13.35□□□□□ -0.27
PDGFRB-205ENST00000519575 PLPPR3Q6T4P5 718 aa13.35□□□□□ -0.27
PDGFRB-205ENST00000519575 NPHP4O75161 1426 aaPredicted RBP13.35□□□□□ -0.27
PDGFRB-205ENST00000519575 NWD1Q149M9 1564 aa13.35□□□□□ -0.27
PDGFRB-205ENST00000519575 LRRC7Q96NW7 1537 aa13.34□□□□□ -0.27
PDGFRB-205ENST00000519575 TTC21AQ8NDW8 1320 aa13.34□□□□□ -0.27
PDGFRB-205ENST00000519575 MTHFSP49914 203 aa13.33□□□□□ -0.28
PDGFRB-205ENST00000519575 CDK12Q9NYV4 1490 aaPredicted RBP13.33□□□□□ -0.28
PDGFRB-205ENST00000519575 NKTRP30414 1462 aaKnown RBP13.32□□□□□ -0.28
PDGFRB-205ENST00000519575 RUNDC1Q96C34 613 aa13.32□□□□□ -0.28
PDGFRB-205ENST00000519575 COG3Q96JB2 828 aa13.32□□□□□ -0.28
PDGFRB-205ENST00000519575 RNF123Q5XPI4 1314 aa13.32□□□□□ -0.28
PDGFRB-205ENST00000519575 USP6P35125 1406 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms