RNA–Protein interactions for RNA: ENST00000519560.5

SLIT3-206, Transcript of slit guidance ligand 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLIT3, Length 9,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-206ENST00000519560 FOSBP53539 338 aa16.55■□□□□ 0.24
SLIT3-206ENST00000519560 SMARCE1Q969G3 411 aa16.55■□□□□ 0.24
SLIT3-206ENST00000519560 KIAA0754O94854 1291 aa16.54■□□□□ 0.24
SLIT3-206ENST00000519560 XBP1P17861 261 aa16.54■□□□□ 0.24
SLIT3-206ENST00000519560 RALYLQ86SE5 291 aaKnown RBP16.54■□□□□ 0.24
SLIT3-206ENST00000519560 CRBNQ96SW2 442 aa16.54■□□□□ 0.24
SLIT3-206ENST00000519560 CCDC144AA2RUR9 1427 aa16.54■□□□□ 0.24
SLIT3-206ENST00000519560 PLIN1O60240 522 aa16.54■□□□□ 0.24
SLIT3-206ENST00000519560 TTLL5Q6EMB2 1281 aa16.54■□□□□ 0.24
SLIT3-206ENST00000519560 TEFQ10587 303 aa16.54■□□□□ 0.24
SLIT3-206ENST00000519560 COG3Q96JB2 828 aa16.54■□□□□ 0.24
SLIT3-206ENST00000519560 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.53■□□□□ 0.24
SLIT3-206ENST00000519560 G3BP1Q13283 466 aaKnown RBP eCLIP16.53■□□□□ 0.24
SLIT3-206ENST00000519560 INCENPQ9NQS7 918 aa16.53■□□□□ 0.24
SLIT3-206ENST00000519560 BCL11BQ9C0K0 894 aaPredicted RBP16.53■□□□□ 0.24
SLIT3-206ENST00000519560 HMGN5P82970 282 aaKnown RBP16.52■□□□□ 0.24
SLIT3-206ENST00000519560 ANKRD18AQ8IVF6 992 aa16.52■□□□□ 0.24
SLIT3-206ENST00000519560 TRIM5Q9C035 493 aa16.52■□□□□ 0.24
SLIT3-206ENST00000519560 CT47B1P0C2W7 299 aaPredicted RBP16.52■□□□□ 0.23
SLIT3-206ENST00000519560 DDX58O95786 925 aaKnown RBP16.52■□□□□ 0.23
SLIT3-206ENST00000519560 MRE11P49959 708 aa16.52■□□□□ 0.23
SLIT3-206ENST00000519560 SDF4Q9BRK5 362 aa16.51■□□□□ 0.23
SLIT3-206ENST00000519560 KINO60870 393 aaKnown RBP16.51■□□□□ 0.23
SLIT3-206ENST00000519560 SMC2O95347 1197 aa16.51■□□□□ 0.23
SLIT3-206ENST00000519560 COG6Q9Y2V7 657 aa16.51■□□□□ 0.23
SLIT3-206ENST00000519560 ENOX2Q16206 610 aaKnown RBP16.5■□□□□ 0.23
SLIT3-206ENST00000519560 SEPT7Q16181 437 aaKnown RBP16.5■□□□□ 0.23
SLIT3-206ENST00000519560 MAGEC2Q9UBF1 373 aaPredicted RBP16.5■□□□□ 0.23
SLIT3-206ENST00000519560 PSMA5P28066 241 aa16.49■□□□□ 0.23
SLIT3-206ENST00000519560 DZIP1LQ8IYY4 767 aaKnown RBP16.49■□□□□ 0.23
SLIT3-206ENST00000519560 EXOC6Q8TAG9 804 aa16.49■□□□□ 0.23
SLIT3-206ENST00000519560 ELL2O00472 640 aaPredicted RBP16.49■□□□□ 0.23
SLIT3-206ENST00000519560 SYCP1Q15431 976 aa16.49■□□□□ 0.23
SLIT3-206ENST00000519560 SKIDA1Q1XH10 827 aa16.49■□□□□ 0.23
SLIT3-206ENST00000519560 EVC2Q86UK5 1308 aa16.49■□□□□ 0.23
SLIT3-206ENST00000519560 C22orf23Q9BZE7 217 aa16.48■□□□□ 0.23
SLIT3-206ENST00000519560 DHX8Q14562 1220 aaKnown RBP16.48■□□□□ 0.23
SLIT3-206ENST00000519560 STAC3Q96MF2 364 aa16.48■□□□□ 0.23
SLIT3-206ENST00000519560 HSP90AB4PQ58FF6 505 aa16.48■□□□□ 0.23
SLIT3-206ENST00000519560 NEFHP12036 1026 aa16.47■□□□□ 0.23
SLIT3-206ENST00000519560 EFCAB5A4FU69 1503 aa16.47■□□□□ 0.23
SLIT3-206ENST00000519560 EZRP15311 586 aaKnown RBP16.47■□□□□ 0.23
SLIT3-206ENST00000519560 EIF2S2P20042 333 aaKnown RBP16.47■□□□□ 0.23
SLIT3-206ENST00000519560 FILIP1LQ4L180 1135 aa16.47■□□□□ 0.23
SLIT3-206ENST00000519560 TXLNBQ8N3L3 684 aa16.47■□□□□ 0.23
SLIT3-206ENST00000519560 TXLNAP40222 546 aa16.47■□□□□ 0.23
SLIT3-206ENST00000519560 PIP4K2AP48426 406 aaPredicted RBP16.47■□□□□ 0.23
SLIT3-206ENST00000519560 EVA1CP58658 441 aa16.47■□□□□ 0.23
SLIT3-206ENST00000519560 PANK3Q9H999 370 aa16.47■□□□□ 0.23
SLIT3-206ENST00000519560 LUC7LQ9NQ29 371 aaKnown RBP16.47■□□□□ 0.23
SLIT3-206ENST00000519560 PAF1Q8N7H5 531 aa16.47■□□□□ 0.23
SLIT3-206ENST00000519560 ATAD2BQ9ULI0 1458 aa16.46■□□□□ 0.23
SLIT3-206ENST00000519560 API5Q9BZZ5 524 aaKnown RBP16.46■□□□□ 0.23
SLIT3-206ENST00000519560 TSPY26PQ9H489 355 aa16.46■□□□□ 0.23
SLIT3-206ENST00000519560 MIA2Q96PC5 1412 aa16.46■□□□□ 0.23
SLIT3-206ENST00000519560 WASHC2CQ9Y4E1 1318 aa16.46■□□□□ 0.23
SLIT3-206ENST00000519560 MSH5O43196 834 aa16.46■□□□□ 0.23
SLIT3-206ENST00000519560 CDK5RAP3Q96JB5 506 aa16.46■□□□□ 0.23
SLIT3-206ENST00000519560 SART3Q15020 963 aaKnown RBP16.46■□□□□ 0.22
SLIT3-206ENST00000519560 MBD3O95983 291 aa16.46■□□□□ 0.22
SLIT3-206ENST00000519560 ZNHIT6Q9NWK9 470 aaKnown RBP16.45■□□□□ 0.22
SLIT3-206ENST00000519560 USP47Q96K76 1375 aa16.45■□□□□ 0.22
SLIT3-206ENST00000519560 PDCP20941 246 aa16.45■□□□□ 0.22
SLIT3-206ENST00000519560 FYCO1Q9BQS8 1478 aa16.45■□□□□ 0.22
SLIT3-206ENST00000519560 NUTM2DQ5VT03 806 aaPredicted RBP16.45■□□□□ 0.22
SLIT3-206ENST00000519560 EFCAB2Q5VUJ9 269 aa16.45■□□□□ 0.22
SLIT3-206ENST00000519560 L3MBTL2Q969R5 705 aa16.45■□□□□ 0.22
SLIT3-206ENST00000519560 PRKRIP1Q9H875 184 aaPredicted RBP16.45■□□□□ 0.22
SLIT3-206ENST00000519560 CADPSQ9ULU8 1353 aa16.45■□□□□ 0.22
SLIT3-206ENST00000519560 IQCEQ6IPM2 695 aa16.45■□□□□ 0.22
SLIT3-206ENST00000519560 WWC2Q6AWC2 1192 aa16.44■□□□□ 0.22
SLIT3-206ENST00000519560 DYDC1Q8WWB3 177 aa16.44■□□□□ 0.22
SLIT3-206ENST00000519560 FKBP5Q13451 457 aaPredicted RBP16.44■□□□□ 0.22
SLIT3-206ENST00000519560 FHOD3Q2V2M9 1422 aa16.43■□□□□ 0.22
SLIT3-206ENST00000519560 RABEP1Q15276 862 aa16.43■□□□□ 0.22
SLIT3-206ENST00000519560 TMEM132AQ24JP5 1023 aa16.43■□□□□ 0.22
SLIT3-206ENST00000519560 PKNOX2Q96KN3 472 aa16.43■□□□□ 0.22
SLIT3-206ENST00000519560 EIF3JO75822 258 aaKnown RBP16.43■□□□□ 0.22
SLIT3-206ENST00000519560 USP8P40818 1118 aa16.43■□□□□ 0.22
SLIT3-206ENST00000519560 CCAR1Q8IX12 1150 aaKnown RBP16.43■□□□□ 0.22
SLIT3-206ENST00000519560 RBM33Q96EV2 1170 aaKnown RBP16.43■□□□□ 0.22
SLIT3-206ENST00000519560 MYOM3Q5VTT5 1437 aa16.43■□□□□ 0.22
SLIT3-206ENST00000519560 CNTLNQ9NXG0 1405 aa16.43■□□□□ 0.22
SLIT3-206ENST00000519560 KIF3BO15066 747 aa16.42■□□□□ 0.22
SLIT3-206ENST00000519560 CDC45O75419 566 aa16.42■□□□□ 0.22
SLIT3-206ENST00000519560 CAVIN1Q6NZI2 390 aaKnown RBP16.42■□□□□ 0.22
SLIT3-206ENST00000519560 RNF214Q8ND24 703 aa16.42■□□□□ 0.22
SLIT3-206ENST00000519560 NUTM2FA1L443 756 aa16.42■□□□□ 0.22
SLIT3-206ENST00000519560 ANKRD62A6NC57 917 aa16.42■□□□□ 0.22
SLIT3-206ENST00000519560 ERLIN1O75477 346 aa16.42■□□□□ 0.22
SLIT3-206ENST00000519560 GBP2P32456 591 aaPredicted RBP16.42■□□□□ 0.22
SLIT3-206ENST00000519560 SAMD1Q6SPF0 538 aaPredicted RBP16.42■□□□□ 0.22
SLIT3-206ENST00000519560 CNTROBQ8N137 903 aa16.41■□□□□ 0.22
SLIT3-206ENST00000519560 ZNF396Q96N95 335 aaPredicted RBP16.41■□□□□ 0.22
SLIT3-206ENST00000519560 NFKBIBQ15653 356 aa16.41■□□□□ 0.22
SLIT3-206ENST00000519560 NECTIN2Q92692 538 aa16.41■□□□□ 0.22
SLIT3-206ENST00000519560 RRBP1Q9P2E9 1410 aaKnown RBP16.41■□□□□ 0.22
SLIT3-206ENST00000519560 FGD6Q6ZV73 1430 aa16.41■□□□□ 0.22
SLIT3-206ENST00000519560 CENPHQ9H3R5 247 aa16.4■□□□□ 0.22
SLIT3-206ENST00000519560 TRAK1Q9UPV9 953 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms