RNA–Protein interactions for RNA: ENST00000519542.1

GABRA1-205, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 3

Gene GABRA1, Length 572 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-205ENST00000519542 PKD2L1Q9P0L9 805 aa7.4□□□□□ -1.22
GABRA1-205ENST00000519542 CLCN1P35523 988 aa7.39□□□□□ -1.23
GABRA1-205ENST00000519542 MMP16P51512 607 aa7.39□□□□□ -1.23
GABRA1-205ENST00000519542 USP46P62068 366 aa7.39□□□□□ -1.23
GABRA1-205ENST00000519542 HLA-CQ95604 372 aa7.39□□□□□ -1.23
GABRA1-205ENST00000519542 HOXA2O43364 376 aa7.38□□□□□ -1.23
GABRA1-205ENST00000519542 ZMYND10O75800 440 aa7.38□□□□□ -1.23
GABRA1-205ENST00000519542 Q3C1V9 767 aa7.38□□□□□ -1.23
GABRA1-205ENST00000519542 TNFRSF10AO00220 468 aa7.37□□□□□ -1.23
GABRA1-205ENST00000519542 DGAT1O75907 488 aa7.37□□□□□ -1.23
GABRA1-205ENST00000519542 ZC3H15Q8WU90 426 aaKnown RBP7.37□□□□□ -1.23
GABRA1-205ENST00000519542 DXOO77932 396 aaKnown RBP7.36□□□□□ -1.23
GABRA1-205ENST00000519542 MYT1Q01538 1121 aa7.36□□□□□ -1.23
GABRA1-205ENST00000519542 GUCA2AQ02747 115 aa7.35□□□□□ -1.23
GABRA1-205ENST00000519542 AMHR2Q16671 573 aa7.35□□□□□ -1.23
GABRA1-205ENST00000519542 USB1Q9BQ65 265 aaKnown RBP7.35□□□□□ -1.23
GABRA1-205ENST00000519542 PKDCCQ504Y2 493 aa7.34□□□□□ -1.23
GABRA1-205ENST00000519542 RB1CC1Q8TDY2 1594 aa7.33□□□□□ -1.24
GABRA1-205ENST00000519542 CD2BP2O95400 341 aaKnown RBP7.33□□□□□ -1.24
GABRA1-205ENST00000519542 TOR4AQ9NXH8 423 aa7.33□□□□□ -1.24
GABRA1-205ENST00000519542 FAM187AA6NFU0 413 aa7.32□□□□□ -1.24
GABRA1-205ENST00000519542 SSTR3P32745 418 aaPredicted RBP7.32□□□□□ -1.24
GABRA1-205ENST00000519542 FOXC1Q12948 553 aa7.32□□□□□ -1.24
GABRA1-205ENST00000519542 KRI1Q8N9T8 703 aaKnown RBP7.31□□□□□ -1.24
GABRA1-205ENST00000519542 PCDHGC3Q9UN70 934 aa7.31□□□□□ -1.24
GABRA1-205ENST00000519542 UNC13AQ9UPW8 1703 aa7.31□□□□□ -1.24
GABRA1-205ENST00000519542 NACADO15069 1562 aa7.3□□□□□ -1.24
GABRA1-205ENST00000519542 TRIM32Q13049 653 aa7.3□□□□□ -1.24
GABRA1-205ENST00000519542 ZNF787Q6DD87 383 aa7.3□□□□□ -1.24
GABRA1-205ENST00000519542 SPIRE2Q8WWL2 714 aa7.3□□□□□ -1.24
GABRA1-205ENST00000519542 SYMPKQ92797 1274 aaKnown RBP7.3□□□□□ -1.24
GABRA1-205ENST00000519542 AVPP01185 164 aa7.29□□□□□ -1.24
GABRA1-205ENST00000519542 JUNDP17535 347 aa7.29□□□□□ -1.24
GABRA1-205ENST00000519542 GIGYF2Q6Y7W6 1299 aaKnown RBP7.29□□□□□ -1.24
GABRA1-205ENST00000519542 NUTM1Q86Y26 1132 aa7.29□□□□□ -1.24
GABRA1-205ENST00000519542 CRIPAKQ8N1N5 446 aa7.29□□□□□ -1.24
GABRA1-205ENST00000519542 AAASQ9NRG9 546 aa7.29□□□□□ -1.24
GABRA1-205ENST00000519542 WNT7AO00755 349 aa7.28□□□□□ -1.24
GABRA1-205ENST00000519542 ZBTB24O43167 697 aaPredicted RBP7.28□□□□□ -1.24
GABRA1-205ENST00000519542 FDX1P10109 184 aa7.28□□□□□ -1.24
GABRA1-205ENST00000519542 RETREG3Q86VR2 466 aa7.28□□□□□ -1.24
GABRA1-205ENST00000519542 TIMELESSQ9UNS1 1208 aa7.28□□□□□ -1.24
GABRA1-205ENST00000519542 MYO15BQ96JP2 1530 aa7.27□□□□□ -1.25
GABRA1-205ENST00000519542 POTECB2RU33 542 aa7.27□□□□□ -1.25
GABRA1-205ENST00000519542 ST8SIA5O15466 376 aa7.27□□□□□ -1.25
GABRA1-205ENST00000519542 TTLL12Q14166 644 aaPredicted RBP7.27□□□□□ -1.25
GABRA1-205ENST00000519542 MOXD2PA6NHM9 499 aa7.26□□□□□ -1.25
GABRA1-205ENST00000519542 TRIM66O15016 1216 aa7.26□□□□□ -1.25
GABRA1-205ENST00000519542 NDUFV2P19404 249 aa7.26□□□□□ -1.25
GABRA1-205ENST00000519542 SKOR1P84550 965 aa7.26□□□□□ -1.25
GABRA1-205ENST00000519542 PARP9Q8IXQ6 854 aa7.26□□□□□ -1.25
GABRA1-205ENST00000519542 CYP4X1Q8N118 509 aa7.26□□□□□ -1.25
GABRA1-205ENST00000519542 ZCCHC6Q5VYS8 1495 aaKnown RBP7.24□□□□□ -1.25
GABRA1-205ENST00000519542 MS4A1P11836 297 aa7.24□□□□□ -1.25
GABRA1-205ENST00000519542 SMPD1P17405 629 aa7.24□□□□□ -1.25
GABRA1-205ENST00000519542 SMCPP49901 116 aaPredicted RBP7.24□□□□□ -1.25
GABRA1-205ENST00000519542 PTCRAQ6ISU1 281 aaPredicted RBP7.24□□□□□ -1.25
GABRA1-205ENST00000519542 CCDC24Q8N4L8 307 aa7.24□□□□□ -1.25
GABRA1-205ENST00000519542 MRGPRX2Q96LB1 330 aa7.24□□□□□ -1.25
GABRA1-205ENST00000519542 ARXQ96QS3 562 aa7.24□□□□□ -1.25
GABRA1-205ENST00000519542 WNT7BP56706 349 aa7.23□□□□□ -1.25
GABRA1-205ENST00000519542 SNIP1Q8TAD8 396 aaKnown RBP7.23□□□□□ -1.25
GABRA1-205ENST00000519542 ZNF775Q96BV0 537 aaPredicted RBP7.23□□□□□ -1.25
GABRA1-205ENST00000519542 AK7Q96M32 723 aa7.23□□□□□ -1.25
GABRA1-205ENST00000519542 BEGAINQ9BUH8 593 aa7.23□□□□□ -1.25
GABRA1-205ENST00000519542 DACH1Q9UI36 760 aa7.23□□□□□ -1.25
GABRA1-205ENST00000519542 BICRAQ9NZM4 1560 aa7.23□□□□□ -1.25
GABRA1-205ENST00000519542 C6orf229H3BNL8 230 aa7.22□□□□□ -1.25
GABRA1-205ENST00000519542 GJA5P36382 358 aa7.22□□□□□ -1.25
GABRA1-205ENST00000519542 CTC1Q2NKJ3 1217 aa7.22□□□□□ -1.25
GABRA1-205ENST00000519542 NUDT12Q9BQG2 462 aa7.22□□□□□ -1.25
GABRA1-205ENST00000519542 TBC1D2Q9BYX2 928 aa7.22□□□□□ -1.25
GABRA1-205ENST00000519542 TTC24A2A3L6 582 aaPredicted RBP7.21□□□□□ -1.26
GABRA1-205ENST00000519542 RC3H1Q5TC82 1133 aaKnown RBP7.21□□□□□ -1.26
GABRA1-205ENST00000519542 J3QL48 77 aa7.2□□□□□ -1.26
GABRA1-205ENST00000519542 CCNYL3P0C7X3 344 aa7.2□□□□□ -1.26
GABRA1-205ENST00000519542 PTPRNQ16849 979 aa7.2□□□□□ -1.26
GABRA1-205ENST00000519542 RSBN1LQ6PCB5 846 aaPredicted RBP7.2□□□□□ -1.26
GABRA1-205ENST00000519542 PRR7Q8TB68 274 aa7.2□□□□□ -1.26
GABRA1-205ENST00000519542 DCAF1Q9Y4B6 1507 aa7.2□□□□□ -1.26
GABRA1-205ENST00000519542 AXIN1O15169 862 aa7.19□□□□□ -1.26
GABRA1-205ENST00000519542 SPTLC1O15269 473 aa7.19□□□□□ -1.26
GABRA1-205ENST00000519542 SIAH2O43255 324 aa7.19□□□□□ -1.26
GABRA1-205ENST00000519542 MTMR2Q13614 643 aa7.19□□□□□ -1.26
GABRA1-205ENST00000519542 DESI1Q6ICB0 168 aa7.19□□□□□ -1.26
GABRA1-205ENST00000519542 SPDYE5A6NIY4 337 aa7.18□□□□□ -1.26
GABRA1-205ENST00000519542 DIXDC1Q155Q3 683 aa7.18□□□□□ -1.26
GABRA1-205ENST00000519542 EVA1BQ9NVM1 165 aa7.18□□□□□ -1.26
GABRA1-205ENST00000519542 PCDHB15Q9Y5E8 787 aa7.18□□□□□ -1.26
GABRA1-205ENST00000519542 SH3BP2P78314 561 aa7.17□□□□□ -1.26
GABRA1-205ENST00000519542 PDE4DQ08499 809 aa7.17□□□□□ -1.26
GABRA1-205ENST00000519542 GTF3C3Q9Y5Q9 886 aa7.17□□□□□ -1.26
GABRA1-205ENST00000519542 KCNH2Q12809 1159 aa7.16□□□□□ -1.26
GABRA1-205ENST00000519542 ERICH6Q7L0X2 663 aa7.16□□□□□ -1.26
GABRA1-205ENST00000519542 HPS1Q92902 700 aa7.16□□□□□ -1.26
GABRA1-205ENST00000519542 UNC93B1Q9H1C4 597 aa7.16□□□□□ -1.26
GABRA1-205ENST00000519542 GMPR2Q9P2T1 348 aaKnown RBP7.16□□□□□ -1.26
GABRA1-205ENST00000519542 CFAP99D6REC4 459 aa7.15□□□□□ -1.26
GABRA1-205ENST00000519542 HRCP23327 699 aa7.15□□□□□ -1.26
GABRA1-205ENST00000519542 LCE2AQ5TA79 106 aaPredicted RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms