RNA–Protein interactions for RNA: ENST00000518407.1

IGHV3-6-201, Transcript of immunoglobulin heavy variable 3-6 (pseudogene), humanhuman

BASIC

Gene IGHV3-6, Length 347 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-6-201ENST00000518407 PRAM1Q96QH2 718 aa17.91■□□□□ 0.46
IGHV3-6-201ENST00000518407 MSH6P52701 1360 aa17.91■□□□□ 0.46
IGHV3-6-201ENST00000518407 USP32Q8NFA0 1604 aa17.9■□□□□ 0.46
IGHV3-6-201ENST00000518407 CARD11Q9BXL7 1154 aa17.89■□□□□ 0.45
IGHV3-6-201ENST00000518407 TOPAZ1Q8N9V7 1692 aa17.87■□□□□ 0.45
IGHV3-6-201ENST00000518407 ROBO1Q9Y6N7 1651 aa17.87■□□□□ 0.45
IGHV3-6-201ENST00000518407 ITSN1Q15811 1721 aa17.87■□□□□ 0.45
IGHV3-6-201ENST00000518407 EIF3AQ14152 1382 aaKnown RBP17.87■□□□□ 0.45
IGHV3-6-201ENST00000518407 MST1RQ04912 1400 aa17.87■□□□□ 0.45
IGHV3-6-201ENST00000518407 TULP4Q9NRJ4 1543 aa17.87■□□□□ 0.45
IGHV3-6-201ENST00000518407 C19orf44Q9H6X5 657 aa17.86■□□□□ 0.45
IGHV3-6-201ENST00000518407 CENPJQ9HC77 1338 aaPredicted RBP17.85■□□□□ 0.45
IGHV3-6-201ENST00000518407 SBNO2Q9Y2G9 1366 aa17.85■□□□□ 0.45
IGHV3-6-201ENST00000518407 USP47Q96K76 1375 aa17.84■□□□□ 0.45
IGHV3-6-201ENST00000518407 SAFB2Q14151 953 aaKnown RBP eCLIP17.84■□□□□ 0.45
IGHV3-6-201ENST00000518407 C14orf37Q86TY3 774 aa17.84■□□□□ 0.45
IGHV3-6-201ENST00000518407 POGKQ9P215 609 aa17.84■□□□□ 0.45
IGHV3-6-201ENST00000518407 NHSL1Q5SYE7 1610 aa17.83■□□□□ 0.44
IGHV3-6-201ENST00000518407 KIF1AQ12756 1690 aa17.81■□□□□ 0.44
IGHV3-6-201ENST00000518407 MINK1Q8N4C8 1332 aaPredicted RBP17.81■□□□□ 0.44
IGHV3-6-201ENST00000518407 CADPS2Q86UW7 1296 aa17.81■□□□□ 0.44
IGHV3-6-201ENST00000518407 C1orf167Q5SNV9 1468 aa17.81■□□□□ 0.44
IGHV3-6-201ENST00000518407 ATP7BP35670 1465 aa17.8■□□□□ 0.44
IGHV3-6-201ENST00000518407 UBAP1LF5GYI3 381 aa17.79■□□□□ 0.44
IGHV3-6-201ENST00000518407 ATF3P18847 181 aa17.79■□□□□ 0.44
IGHV3-6-201ENST00000518407 ANKARQ7Z5J8 1434 aa17.79■□□□□ 0.44
IGHV3-6-201ENST00000518407 TOM1O60784 492 aa17.78■□□□□ 0.44
IGHV3-6-201ENST00000518407 HIRIP3Q9BW71 556 aaPredicted RBP17.78■□□□□ 0.44
IGHV3-6-201ENST00000518407 AHDC1Q5TGY3 1603 aaPredicted RBP17.77■□□□□ 0.44
IGHV3-6-201ENST00000518407 TESK2Q96S53 571 aa17.77■□□□□ 0.44
IGHV3-6-201ENST00000518407 PHLPP1O60346 1717 aa17.76■□□□□ 0.43
IGHV3-6-201ENST00000518407 ST20-MTHFSA0A0A6YYL1 179 aa17.76■□□□□ 0.43
IGHV3-6-201ENST00000518407 WASLO00401 505 aaPredicted RBP17.76■□□□□ 0.43
IGHV3-6-201ENST00000518407 SLAIN2Q9P270 581 aa17.75■□□□□ 0.43
IGHV3-6-201ENST00000518407 AKAP12Q02952 1782 aa17.75■□□□□ 0.43
IGHV3-6-201ENST00000518407 PRR36Q9H6K5 1346 aa17.74■□□□□ 0.43
IGHV3-6-201ENST00000518407 MYOM1P52179 1685 aa17.74■□□□□ 0.43
IGHV3-6-201ENST00000518407 FBXO41Q8TF61 875 aa17.74■□□□□ 0.43
IGHV3-6-201ENST00000518407 COL16A1Q07092 1604 aaPredicted RBP17.73■□□□□ 0.43
IGHV3-6-201ENST00000518407 TRPM3Q9HCF6 1732 aaPredicted RBP17.72■□□□□ 0.43
IGHV3-6-201ENST00000518407 HSPA5P11021 654 aaKnown RBP17.71■□□□□ 0.43
IGHV3-6-201ENST00000518407 BRINP3Q76B58 766 aa17.71■□□□□ 0.43
IGHV3-6-201ENST00000518407 CDK19Q9BWU1 502 aa17.71■□□□□ 0.43
IGHV3-6-201ENST00000518407 EVC2Q86UK5 1308 aa17.71■□□□□ 0.42
IGHV3-6-201ENST00000518407 DISP3Q9P2K9 1392 aa17.7■□□□□ 0.42
IGHV3-6-201ENST00000518407 ZEB1P37275 1124 aaPredicted RBP17.7■□□□□ 0.42
IGHV3-6-201ENST00000518407 EIF4G2P78344 907 aaKnown RBP eCLIP17.7■□□□□ 0.42
IGHV3-6-201ENST00000518407 PIP4K2BP78356 416 aa17.7■□□□□ 0.42
IGHV3-6-201ENST00000518407 MON2Q7Z3U7 1717 aa17.69■□□□□ 0.42
IGHV3-6-201ENST00000518407 NUTM2FA1L443 756 aa17.69■□□□□ 0.42
IGHV3-6-201ENST00000518407 ORAI2Q96SN7 254 aa17.68■□□□□ 0.42
IGHV3-6-201ENST00000518407 NRKQ7Z2Y5 1582 aa17.67■□□□□ 0.42
IGHV3-6-201ENST00000518407 CABP2Q9NPB3 220 aa17.67■□□□□ 0.42
IGHV3-6-201ENST00000518407 PXDNQ92626 1479 aa17.67■□□□□ 0.42
IGHV3-6-201ENST00000518407 NUDT16Q96DE0 195 aaKnown RBP17.66■□□□□ 0.42
IGHV3-6-201ENST00000518407 ALS2Q96Q42 1657 aa17.66■□□□□ 0.42
IGHV3-6-201ENST00000518407 SCAF1Q9H7N4 1312 aaKnown RBP17.66■□□□□ 0.42
IGHV3-6-201ENST00000518407 ATAD2Q6PL18 1390 aa17.66■□□□□ 0.42
IGHV3-6-201ENST00000518407 PPIP5K1Q6PFW1 1433 aa17.65■□□□□ 0.42
IGHV3-6-201ENST00000518407 SHPRHQ149N8 1683 aa17.65■□□□□ 0.42
IGHV3-6-201ENST00000518407 SRPK2P78362 688 aaKnown RBP17.65■□□□□ 0.42
IGHV3-6-201ENST00000518407 ESCO1Q5FWF5 840 aa17.64■□□□□ 0.41
IGHV3-6-201ENST00000518407 PUS7Q96PZ0 661 aaKnown RBP17.64■□□□□ 0.41
IGHV3-6-201ENST00000518407 SLC24A1O60721 1099 aa17.63■□□□□ 0.41
IGHV3-6-201ENST00000518407 PHF8Q9UPP1 1060 aa17.63■□□□□ 0.41
IGHV3-6-201ENST00000518407 POLR3AO14802 1390 aaPredicted RBP17.63■□□□□ 0.41
IGHV3-6-201ENST00000518407 CD163L1Q9NR16 1453 aa17.63■□□□□ 0.41
IGHV3-6-201ENST00000518407 TMF1P82094 1093 aa17.62■□□□□ 0.41
IGHV3-6-201ENST00000518407 CCDC61Q9Y6R9 512 aa17.62■□□□□ 0.41
IGHV3-6-201ENST00000518407 COL22A1Q8NFW1 1626 aaPredicted RBP17.61■□□□□ 0.41
IGHV3-6-201ENST00000518407 ABCA3Q99758 1704 aa17.61■□□□□ 0.41
IGHV3-6-201ENST00000518407 CRYBG1Q9Y4K1 1723 aa17.61■□□□□ 0.41
IGHV3-6-201ENST00000518407 PLEKHG3A1L390 1219 aa17.61■□□□□ 0.41
IGHV3-6-201ENST00000518407 DDX17Q92841 729 aaKnown RBP17.61■□□□□ 0.41
IGHV3-6-201ENST00000518407 MARF1Q9Y4F3 1742 aaKnown RBP17.6■□□□□ 0.41
IGHV3-6-201ENST00000518407 SOS2Q07890 1332 aaPredicted RBP17.59■□□□□ 0.41
IGHV3-6-201ENST00000518407 NPHP3Q7Z494 1330 aa17.59■□□□□ 0.41
IGHV3-6-201ENST00000518407 HSPA1LP34931 641 aa17.59■□□□□ 0.41
IGHV3-6-201ENST00000518407 PMFBP1Q8TBY8 1022 aa17.59■□□□□ 0.41
IGHV3-6-201ENST00000518407 USP54Q70EL1 1684 aa17.58■□□□□ 0.41
IGHV3-6-201ENST00000518407 CPSF1Q10570 1443 aaKnown RBP17.58■□□□□ 0.41
IGHV3-6-201ENST00000518407 NINLQ9Y2I6 1382 aa17.58■□□□□ 0.4
IGHV3-6-201ENST00000518407 ILDR1Q86SU0 546 aaPredicted RBP17.58■□□□□ 0.4
IGHV3-6-201ENST00000518407 FOXO3O43524 673 aa17.57■□□□□ 0.4
IGHV3-6-201ENST00000518407 PIK3C2AO00443 1686 aa17.57■□□□□ 0.4
IGHV3-6-201ENST00000518407 ACEP12821 1306 aa17.56■□□□□ 0.4
IGHV3-6-201ENST00000518407 C11orf95C9JLR9 678 aaPredicted RBP17.56■□□□□ 0.4
IGHV3-6-201ENST00000518407 CABP1Q9NZU7 370 aa17.56■□□□□ 0.4
IGHV3-6-201ENST00000518407 KIF20BQ96Q89 1820 aa17.56■□□□□ 0.4
IGHV3-6-201ENST00000518407 USP6P35125 1406 aa17.55■□□□□ 0.4
IGHV3-6-201ENST00000518407 CDCA8Q53HL2 280 aa17.55■□□□□ 0.4
IGHV3-6-201ENST00000518407 TNS3Q68CZ2 1445 aa17.55■□□□□ 0.4
IGHV3-6-201ENST00000518407 SSH2Q76I76 1423 aa17.55■□□□□ 0.4
IGHV3-6-201ENST00000518407 SBNO1A3KN83 1393 aa17.54■□□□□ 0.4
IGHV3-6-201ENST00000518407 PHRF1Q9P1Y6 1649 aaKnown RBP17.54■□□□□ 0.4
IGHV3-6-201ENST00000518407 MED1Q15648 1581 aaPredicted RBP17.54■□□□□ 0.4
IGHV3-6-201ENST00000518407 A0A1W2PP64 1363 aa17.53■□□□□ 0.4
IGHV3-6-201ENST00000518407 XPCQ01831 940 aaPredicted RBP17.53■□□□□ 0.4
IGHV3-6-201ENST00000518407 KIF7Q2M1P5 1343 aa17.52■□□□□ 0.4
IGHV3-6-201ENST00000518407 KRT28Q7Z3Y7 464 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms