RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 FAM9BQ8IZU0 186 aa24.5■■□□□ 1.51
SDC2-202ENST00000518385 KDM4FA0A1W2PPD8 638 aa24.49■■□□□ 1.51
SDC2-202ENST00000518385 TMC1Q8TDI8 760 aa24.49■■□□□ 1.51
SDC2-202ENST00000518385 STK26Q9P289 416 aa24.48■■□□□ 1.51
SDC2-202ENST00000518385 ADAMTS13Q76LX8 1427 aa24.47■■□□□ 1.51
SDC2-202ENST00000518385 NLRP13Q86W25 1043 aa24.47■■□□□ 1.51
SDC2-202ENST00000518385 PUS7Q96PZ0 661 aaKnown RBP24.46■■□□□ 1.51
SDC2-202ENST00000518385 LRPPRCP42704 1394 aaKnown RBP24.46■■□□□ 1.51
SDC2-202ENST00000518385 RNF123Q5XPI4 1314 aa24.46■■□□□ 1.51
SDC2-202ENST00000518385 METP08581 1390 aa24.46■■□□□ 1.51
SDC2-202ENST00000518385 NPC1L1Q9UHC9 1359 aa24.46■■□□□ 1.51
SDC2-202ENST00000518385 PNISRQ8TF01 805 aaKnown RBP24.46■■□□□ 1.51
SDC2-202ENST00000518385 ARHGEF28Q8N1W1 1705 aaKnown RBP24.45■■□□□ 1.51
SDC2-202ENST00000518385 MED14O60244 1454 aa24.45■■□□□ 1.5
SDC2-202ENST00000518385 ABCC11Q96J66 1382 aa24.44■■□□□ 1.5
SDC2-202ENST00000518385 ANKLE2Q86XL3 938 aa24.44■■□□□ 1.5
SDC2-202ENST00000518385 KNSTRNQ9Y448 316 aa24.43■■□□□ 1.5
SDC2-202ENST00000518385 TBX22Q9Y458 520 aa24.42■■□□□ 1.5
SDC2-202ENST00000518385 MYOM1P52179 1685 aa24.41■■□□□ 1.5
SDC2-202ENST00000518385 DLC1Q96QB1 1528 aa24.41■■□□□ 1.5
SDC2-202ENST00000518385 INSRP06213 1382 aa24.4■■□□□ 1.5
SDC2-202ENST00000518385 QRICH2Q9H0J4 1663 aa24.4■■□□□ 1.5
SDC2-202ENST00000518385 SIRT1Q96EB6 747 aa24.39■■□□□ 1.5
SDC2-202ENST00000518385 SLC26A8Q96RN1 970 aa24.39■■□□□ 1.5
SDC2-202ENST00000518385 PRAM1Q96QH2 718 aa24.38■■□□□ 1.49
SDC2-202ENST00000518385 NUDCQ9Y266 331 aa24.38■■□□□ 1.49
SDC2-202ENST00000518385 POGKQ9P215 609 aa24.37■■□□□ 1.49
SDC2-202ENST00000518385 DIP2AQ14689 1571 aa24.37■■□□□ 1.49
SDC2-202ENST00000518385 TECPR2O15040 1411 aa24.36■■□□□ 1.49
SDC2-202ENST00000518385 CNGB1Q14028 1251 aaPredicted RBP24.35■■□□□ 1.49
SDC2-202ENST00000518385 AMER1Q5JTC6 1135 aaPredicted RBP24.34■■□□□ 1.49
SDC2-202ENST00000518385 KNDC1Q76NI1 1749 aa24.33■■□□□ 1.49
SDC2-202ENST00000518385 EVC2Q86UK5 1308 aa24.33■■□□□ 1.48
SDC2-202ENST00000518385 IRX6P78412 446 aaPredicted RBP24.33■■□□□ 1.48
SDC2-202ENST00000518385 SAFB2Q14151 953 aaKnown RBP eCLIP24.33■■□□□ 1.48
SDC2-202ENST00000518385 CC2D1BQ5T0F9 858 aaKnown RBP24.33■■□□□ 1.48
SDC2-202ENST00000518385 FAM135BQ49AJ0 1406 aa24.32■■□□□ 1.48
SDC2-202ENST00000518385 WAPLQ7Z5K2 1190 aa24.32■■□□□ 1.48
SDC2-202ENST00000518385 PTPRUQ92729 1446 aa24.31■■□□□ 1.48
SDC2-202ENST00000518385 CPS1P31327 1500 aa24.3■■□□□ 1.48
SDC2-202ENST00000518385 PIK3R4Q99570 1358 aa24.29■■□□□ 1.48
SDC2-202ENST00000518385 PLEKHH1Q9ULM0 1364 aa24.28■■□□□ 1.48
SDC2-202ENST00000518385 MINK1Q8N4C8 1332 aaPredicted RBP24.28■■□□□ 1.48
SDC2-202ENST00000518385 AMOTL2Q9Y2J4 779 aa24.28■■□□□ 1.48
SDC2-202ENST00000518385 TULP4Q9NRJ4 1543 aa24.28■■□□□ 1.48
SDC2-202ENST00000518385 NCKAP5LQ9HCH0 1330 aa24.27■■□□□ 1.48
SDC2-202ENST00000518385 NPHP4O75161 1426 aaPredicted RBP24.27■■□□□ 1.48
SDC2-202ENST00000518385 ROBO2Q9HCK4 1378 aa24.25■■□□□ 1.47
SDC2-202ENST00000518385 NINLQ9Y2I6 1382 aa24.25■■□□□ 1.47
SDC2-202ENST00000518385 NOP58Q9Y2X3 529 aaKnown RBP24.25■■□□□ 1.47
SDC2-202ENST00000518385 B4GALNT3Q6L9W6 998 aa24.24■■□□□ 1.47
SDC2-202ENST00000518385 PPP2R1AP30153 589 aa24.22■■□□□ 1.47
SDC2-202ENST00000518385 CABP2Q9NPB3 220 aa24.21■■□□□ 1.47
SDC2-202ENST00000518385 PTCH1Q13635 1447 aa24.21■■□□□ 1.47
SDC2-202ENST00000518385 CDK19Q9BWU1 502 aa24.2■■□□□ 1.47
SDC2-202ENST00000518385 USP32Q8NFA0 1604 aa24.2■■□□□ 1.46
SDC2-202ENST00000518385 XRN1Q8IZH2 1706 aaKnown RBP24.19■■□□□ 1.46
SDC2-202ENST00000518385 ANP32AP39687 249 aaKnown RBP24.19■■□□□ 1.46
SDC2-202ENST00000518385 SRPK2P78362 688 aaKnown RBP24.19■■□□□ 1.46
SDC2-202ENST00000518385 CARD14Q9BXL6 1004 aa24.19■■□□□ 1.46
SDC2-202ENST00000518385 LMTK3Q96Q04 1460 aa24.18■■□□□ 1.46
SDC2-202ENST00000518385 CHD2O14647 1828 aaKnown RBP24.18■■□□□ 1.46
SDC2-202ENST00000518385 HSPA2P54652 639 aa24.17■■□□□ 1.46
SDC2-202ENST00000518385 PDE3BQ13370 1112 aa24.17■■□□□ 1.46
SDC2-202ENST00000518385 CCDC136Q96JN2 1154 aa24.17■■□□□ 1.46
SDC2-202ENST00000518385 WASLO00401 505 aaPredicted RBP24.16■■□□□ 1.46
SDC2-202ENST00000518385 KCNA6P17658 529 aa24.16■■□□□ 1.46
SDC2-202ENST00000518385 SLC12A5Q9H2X9 1139 aa24.16■■□□□ 1.46
SDC2-202ENST00000518385 ATAD2Q6PL18 1390 aa24.16■■□□□ 1.46
SDC2-202ENST00000518385 BLMP54132 1417 aaPredicted RBP24.16■■□□□ 1.46
SDC2-202ENST00000518385 ANKRD36BQ8N2N9 1353 aa24.15■■□□□ 1.46
SDC2-202ENST00000518385 NSD2O96028 1365 aa24.14■■□□□ 1.46
SDC2-202ENST00000518385 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.14■■□□□ 1.45
SDC2-202ENST00000518385 NSD3Q9BZ95 1437 aa24.13■■□□□ 1.45
SDC2-202ENST00000518385 IPO9Q96P70 1041 aaKnown RBP24.12■■□□□ 1.45
SDC2-202ENST00000518385 ADGRB2O60241 1585 aa24.11■■□□□ 1.45
SDC2-202ENST00000518385 CGNL1Q0VF96 1302 aa24.1■■□□□ 1.45
SDC2-202ENST00000518385 WDR43Q15061 677 aaKnown RBP eCLIP24.08■■□□□ 1.45
SDC2-202ENST00000518385 TCERG1O14776 1098 aaKnown RBP24.07■■□□□ 1.44
SDC2-202ENST00000518385 NUDT16Q96DE0 195 aaKnown RBP24.06■■□□□ 1.44
SDC2-202ENST00000518385 POLR3AO14802 1390 aaPredicted RBP24.06■■□□□ 1.44
SDC2-202ENST00000518385 TERF2IPQ9NYB0 399 aa24.05■■□□□ 1.44
SDC2-202ENST00000518385 NWD1Q149M9 1564 aa24.04■■□□□ 1.44
SDC2-202ENST00000518385 MS4A1P11836 297 aa24.04■■□□□ 1.44
SDC2-202ENST00000518385 MORC1Q86VD1 984 aa24.04■■□□□ 1.44
SDC2-202ENST00000518385 CABP1Q9NZU7 370 aa24.04■■□□□ 1.44
SDC2-202ENST00000518385 STRCQ7RTU9 1775 aa24.04■■□□□ 1.44
SDC2-202ENST00000518385 DEKP35659 375 aaKnown RBP24.03■■□□□ 1.44
SDC2-202ENST00000518385 ADAMTS8Q9UP79 889 aa24.03■■□□□ 1.44
SDC2-202ENST00000518385 CCDC61Q9Y6R9 512 aa24.03■■□□□ 1.44
SDC2-202ENST00000518385 NGEFQ8N5V2 710 aa24.02■■□□□ 1.44
SDC2-202ENST00000518385 CD163L1Q9NR16 1453 aa24.01■■□□□ 1.43
SDC2-202ENST00000518385 ZBTB47Q9UFB7 747 aaPredicted RBP24■■□□□ 1.43
SDC2-202ENST00000518385 PRR36Q9H6K5 1346 aa24■■□□□ 1.43
SDC2-202ENST00000518385 RRP1P56182 461 aaKnown RBP23.99■■□□□ 1.43
SDC2-202ENST00000518385 HDGFL2Q7Z4V5 671 aaPredicted RBP23.99■■□□□ 1.43
SDC2-202ENST00000518385 A0A1W2PP64 1363 aa23.99■■□□□ 1.43
SDC2-202ENST00000518385 ATP7BP35670 1465 aa23.99■■□□□ 1.43
SDC2-202ENST00000518385 PPIP5K1Q6PFW1 1433 aa23.98■■□□□ 1.43
SDC2-202ENST00000518385 RTL5Q5HYW3 569 aaPredicted RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 208.3 ms