RNA–Protein interactions for RNA: ENST00000518293.5

PABPC1-206, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-206ENST00000518293 MDM2Q00987 491 aaPredicted RBP8.63□□□□□ -1.03
PABPC1-206ENST00000518293 AMHR2Q16671 573 aa8.63□□□□□ -1.03
PABPC1-206ENST00000518293 FAM160A2Q8N612 972 aaPredicted RBP8.63□□□□□ -1.03
PABPC1-206ENST00000518293 REPIN1Q9BWE0 567 aaKnown RBP8.63□□□□□ -1.03
PABPC1-206ENST00000518293 BRICD5Q6PL45 260 aa8.62□□□□□ -1.03
PABPC1-206ENST00000518293 PDE4DQ08499 809 aa8.61□□□□□ -1.03
PABPC1-206ENST00000518293 PRDM9Q9NQV7 894 aa8.61□□□□□ -1.03
PABPC1-206ENST00000518293 ZBTB24O43167 697 aaPredicted RBP8.6□□□□□ -1.03
PABPC1-206ENST00000518293 Q3C1V9 767 aa8.6□□□□□ -1.03
PABPC1-206ENST00000518293 MSS51Q4VC12 460 aa8.6□□□□□ -1.03
PABPC1-206ENST00000518293 RNF19BQ6ZMZ0 732 aa8.6□□□□□ -1.03
PABPC1-206ENST00000518293 PKD2L1Q9P0L9 805 aa8.6□□□□□ -1.03
PABPC1-206ENST00000518293 CD46P15529 392 aa8.59□□□□□ -1.03
PABPC1-206ENST00000518293 CLCN1P35523 988 aa8.58□□□□□ -1.04
PABPC1-206ENST00000518293 PARP9Q8IXQ6 854 aa8.58□□□□□ -1.04
PABPC1-206ENST00000518293 ZNF775Q96BV0 537 aaPredicted RBP8.58□□□□□ -1.04
PABPC1-206ENST00000518293 GPCPD1Q9NPB8 672 aa8.58□□□□□ -1.04
PABPC1-206ENST00000518293 KDM4AO75164 1064 aa8.57□□□□□ -1.04
PABPC1-206ENST00000518293 TTLL12Q14166 644 aaPredicted RBP8.57□□□□□ -1.04
PABPC1-206ENST00000518293 CYP4X1Q8N118 509 aa8.57□□□□□ -1.04
PABPC1-206ENST00000518293 ST8SIA5O15466 376 aa8.56□□□□□ -1.04
PABPC1-206ENST00000518293 GIGYF2Q6Y7W6 1299 aaKnown RBP8.56□□□□□ -1.04
PABPC1-206ENST00000518293 FAM217BQ9NTX9 383 aaPredicted RBP8.56□□□□□ -1.04
PABPC1-206ENST00000518293 AAASQ9NRG9 546 aa8.55□□□□□ -1.04
PABPC1-206ENST00000518293 SSTR3P32745 418 aaPredicted RBP8.54□□□□□ -1.04
PABPC1-206ENST00000518293 USP46P62068 366 aa8.54□□□□□ -1.04
PABPC1-206ENST00000518293 USB1Q9BQ65 265 aaKnown RBP8.54□□□□□ -1.04
PABPC1-206ENST00000518293 GPBP1L1Q9HC44 474 aaPredicted RBP8.54□□□□□ -1.04
PABPC1-206ENST00000518293 TOR4AQ9NXH8 423 aa8.54□□□□□ -1.04
PABPC1-206ENST00000518293 POTECB2RU33 542 aa8.53□□□□□ -1.04
PABPC1-206ENST00000518293 MMP16P51512 607 aa8.53□□□□□ -1.04
PABPC1-206ENST00000518293 TTC24A2A3L6 582 aaPredicted RBP8.52□□□□□ -1.05
PABPC1-206ENST00000518293 MS4A1P11836 297 aa8.52□□□□□ -1.05
PABPC1-206ENST00000518293 BRPF1P55201 1214 aaPredicted RBP8.52□□□□□ -1.05
PABPC1-206ENST00000518293 AVPP01185 164 aa8.51□□□□□ -1.05
PABPC1-206ENST00000518293 TRIM32Q13049 653 aa8.51□□□□□ -1.05
PABPC1-206ENST00000518293 CRIPAKQ8N1N5 446 aa8.51□□□□□ -1.05
PABPC1-206ENST00000518293 AXIN1O15169 862 aa8.5□□□□□ -1.05
PABPC1-206ENST00000518293 HOXA2O43364 376 aa8.5□□□□□ -1.05
PABPC1-206ENST00000518293 KDM4CQ9H3R0 1056 aa8.5□□□□□ -1.05
PABPC1-206ENST00000518293 WNT7AO00755 349 aa8.49□□□□□ -1.05
PABPC1-206ENST00000518293 DXOO77932 396 aaKnown RBP8.49□□□□□ -1.05
PABPC1-206ENST00000518293 NEUROD2Q15784 382 aa8.49□□□□□ -1.05
PABPC1-206ENST00000518293 CTC1Q2NKJ3 1217 aa8.49□□□□□ -1.05
PABPC1-206ENST00000518293 CCDC24Q8N4L8 307 aa8.49□□□□□ -1.05
PABPC1-206ENST00000518293 HLA-CQ95604 372 aa8.49□□□□□ -1.05
PABPC1-206ENST00000518293 NUTM1Q86Y26 1132 aa8.48□□□□□ -1.05
PABPC1-206ENST00000518293 SNIP1Q8TAD8 396 aaKnown RBP8.47□□□□□ -1.05
PABPC1-206ENST00000518293 BEGAINQ9BUH8 593 aa8.47□□□□□ -1.05
PABPC1-206ENST00000518293 GUCA2AQ02747 115 aa8.46□□□□□ -1.06
PABPC1-206ENST00000518293 DACH1Q9UI36 760 aa8.46□□□□□ -1.06
PABPC1-206ENST00000518293 SMCPP49901 116 aaPredicted RBP8.45□□□□□ -1.06
PABPC1-206ENST00000518293 MRGPRX2Q96LB1 330 aa8.45□□□□□ -1.06
PABPC1-206ENST00000518293 FAM117AQ9C073 453 aa8.45□□□□□ -1.06
PABPC1-206ENST00000518293 C11orf95C9JLR9 678 aaPredicted RBP8.43□□□□□ -1.06
PABPC1-206ENST00000518293 SMPD1P17405 629 aa8.43□□□□□ -1.06
PABPC1-206ENST00000518293 JUNDP17535 347 aa8.43□□□□□ -1.06
PABPC1-206ENST00000518293 GMPR2Q9P2T1 348 aaKnown RBP8.43□□□□□ -1.06
PABPC1-206ENST00000518293 WNT7BP56706 349 aa8.42□□□□□ -1.06
PABPC1-206ENST00000518293 RETREG3Q86VR2 466 aa8.42□□□□□ -1.06
PABPC1-206ENST00000518293 SPIRE2Q8WWL2 714 aa8.42□□□□□ -1.06
PABPC1-206ENST00000518293 SYMPKQ92797 1274 aaKnown RBP8.42□□□□□ -1.06
PABPC1-206ENST00000518293 PLEKHG3A1L390 1219 aa8.41□□□□□ -1.06
PABPC1-206ENST00000518293 FDX1P10109 184 aa8.41□□□□□ -1.06
PABPC1-206ENST00000518293 RC3H1Q5TC82 1133 aaKnown RBP8.41□□□□□ -1.06
PABPC1-206ENST00000518293 TREML4Q6UXN2 200 aa8.41□□□□□ -1.06
PABPC1-206ENST00000518293 C6orf229H3BNL8 230 aa8.4□□□□□ -1.06
PABPC1-206ENST00000518293 J3QL48 77 aa8.4□□□□□ -1.06
PABPC1-206ENST00000518293 IL27Q8NEV9 243 aa8.4□□□□□ -1.06
PABPC1-206ENST00000518293 NUDT12Q9BQG2 462 aa8.4□□□□□ -1.06
PABPC1-206ENST00000518293 TBC1D2Q9BYX2 928 aa8.4□□□□□ -1.06
PABPC1-206ENST00000518293 SKOR1P84550 965 aa8.39□□□□□ -1.07
PABPC1-206ENST00000518293 DDRGK1Q96HY6 314 aa8.39□□□□□ -1.07
PABPC1-206ENST00000518293 ATP13A2Q9NQ11 1180 aa8.38□□□□□ -1.07
PABPC1-206ENST00000518293 MOXD2PA6NHM9 499 aa8.37□□□□□ -1.07
PABPC1-206ENST00000518293 NDUFV2P19404 249 aa8.37□□□□□ -1.07
PABPC1-206ENST00000518293 HPS1Q92902 700 aa8.37□□□□□ -1.07
PABPC1-206ENST00000518293 PCDHGC3Q9UN70 934 aa8.37□□□□□ -1.07
PABPC1-206ENST00000518293 DIXDC1Q155Q3 683 aa8.36□□□□□ -1.07
PABPC1-206ENST00000518293 MYSM1Q5VVJ2 828 aa8.36□□□□□ -1.07
PABPC1-206ENST00000518293 EHBP1Q8NDI1 1231 aa8.36□□□□□ -1.07
PABPC1-206ENST00000518293 SENP2Q9HC62 589 aa8.36□□□□□ -1.07
PABPC1-206ENST00000518293 ALDH1A1P00352 501 aa8.35□□□□□ -1.07
PABPC1-206ENST00000518293 CCNYL3P0C7X3 344 aa8.35□□□□□ -1.07
PABPC1-206ENST00000518293 WFS1O76024 890 aa8.34□□□□□ -1.07
PABPC1-206ENST00000518293 PTCRAQ6ISU1 281 aaPredicted RBP8.34□□□□□ -1.07
PABPC1-206ENST00000518293 LCE2AQ5TA79 106 aaPredicted RBP8.33□□□□□ -1.08
PABPC1-206ENST00000518293 RSBN1LQ6PCB5 846 aaPredicted RBP8.33□□□□□ -1.08
PABPC1-206ENST00000518293 RIC3Q7Z5B4 369 aa8.33□□□□□ -1.08
PABPC1-206ENST00000518293 RSPH6AQ9H0K4 717 aa8.33□□□□□ -1.08
PABPC1-206ENST00000518293 POLR3EQ9NVU0 708 aa8.33□□□□□ -1.08
PABPC1-206ENST00000518293 SPTLC1O15269 473 aa8.32□□□□□ -1.08
PABPC1-206ENST00000518293 PTPRNQ16849 979 aa8.32□□□□□ -1.08
PABPC1-206ENST00000518293 KIFC2Q96AC6 838 aa8.32□□□□□ -1.08
PABPC1-206ENST00000518293 TRIM47Q96LD4 638 aa8.32□□□□□ -1.08
PABPC1-206ENST00000518293 LIMD1Q9UGP4 676 aa8.32□□□□□ -1.08
PABPC1-206ENST00000518293 PCDHB15Q9Y5E8 787 aa8.32□□□□□ -1.08
PABPC1-206ENST00000518293 SPDYE5A6NIY4 337 aa8.31□□□□□ -1.08
PABPC1-206ENST00000518293 SNRPBP14678 240 aaKnown RBP8.31□□□□□ -1.08
PABPC1-206ENST00000518293 GJA5P36382 358 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms