RNA–Protein interactions for RNA: ENST00000518290.1

ARFGEF1-204, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 3,179 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-204ENST00000518290 ANKRD36BQ8N2N9 1353 aa10.93□□□□□ -0.66
ARFGEF1-204ENST00000518290 TNRQ92752 1358 aa10.93□□□□□ -0.66
ARFGEF1-204ENST00000518290 ITSN1Q15811 1721 aa10.93□□□□□ -0.66
ARFGEF1-204ENST00000518290 NALCNQ8IZF0 1738 aa10.93□□□□□ -0.66
ARFGEF1-204ENST00000518290 ERICH6BQ5W0A0 696 aa10.93□□□□□ -0.66
ARFGEF1-204ENST00000518290 PANK3Q9H999 370 aa10.93□□□□□ -0.66
ARFGEF1-204ENST00000518290 LRRC7Q96NW7 1537 aa10.93□□□□□ -0.66
ARFGEF1-204ENST00000518290 PLEKHG1Q9ULL1 1385 aa10.92□□□□□ -0.66
ARFGEF1-204ENST00000518290 ADAMTS13Q76LX8 1427 aa10.91□□□□□ -0.66
ARFGEF1-204ENST00000518290 POLR3AO14802 1390 aaPredicted RBP10.91□□□□□ -0.66
ARFGEF1-204ENST00000518290 TMEM2Q9UHN6 1383 aa10.91□□□□□ -0.66
ARFGEF1-204ENST00000518290 IQSEC2Q5JU85 1478 aa10.91□□□□□ -0.66
ARFGEF1-204ENST00000518290 CEP170BQ9Y4F5 1589 aaPredicted RBP10.9□□□□□ -0.66
ARFGEF1-204ENST00000518290 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.9□□□□□ -0.66
ARFGEF1-204ENST00000518290 SUPT16HQ9Y5B9 1047 aaKnown RBP10.9□□□□□ -0.66
ARFGEF1-204ENST00000518290 COL3A1P02461 1466 aaPredicted RBP10.9□□□□□ -0.67
ARFGEF1-204ENST00000518290 ATAD2Q6PL18 1390 aa10.9□□□□□ -0.67
ARFGEF1-204ENST00000518290 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.89□□□□□ -0.67
ARFGEF1-204ENST00000518290 PTCH1Q13635 1447 aa10.89□□□□□ -0.67
ARFGEF1-204ENST00000518290 NCBP3Q53F19 620 aaKnown RBP10.89□□□□□ -0.67
ARFGEF1-204ENST00000518290 FBXO31Q5XUX0 539 aaPredicted RBP10.88□□□□□ -0.67
ARFGEF1-204ENST00000518290 CHD2O14647 1828 aaKnown RBP10.87□□□□□ -0.67
ARFGEF1-204ENST00000518290 CARD14Q9BXL6 1004 aa10.87□□□□□ -0.67
ARFGEF1-204ENST00000518290 EVC2Q86UK5 1308 aa10.87□□□□□ -0.67
ARFGEF1-204ENST00000518290 CPSF1Q10570 1443 aaKnown RBP10.87□□□□□ -0.67
ARFGEF1-204ENST00000518290 HNRNPUQ00839 825 aaKnown RBP eCLIP10.86□□□□□ -0.67
ARFGEF1-204ENST00000518290 PPP2R1AP30153 589 aa10.86□□□□□ -0.67
ARFGEF1-204ENST00000518290 NSD3Q9BZ95 1437 aa10.86□□□□□ -0.67
ARFGEF1-204ENST00000518290 NWD1Q149M9 1564 aa10.86□□□□□ -0.67
ARFGEF1-204ENST00000518290 PDE3BQ13370 1112 aa10.85□□□□□ -0.67
ARFGEF1-204ENST00000518290 FMN2Q9NZ56 1722 aa10.85□□□□□ -0.67
ARFGEF1-204ENST00000518290 ZNF521Q96K83 1311 aa10.85□□□□□ -0.67
ARFGEF1-204ENST00000518290 MARF1Q9Y4F3 1742 aaKnown RBP10.84□□□□□ -0.67
ARFGEF1-204ENST00000518290 NGEFQ8N5V2 710 aa10.84□□□□□ -0.67
ARFGEF1-204ENST00000518290 KNSTRNQ9Y448 316 aa10.84□□□□□ -0.67
ARFGEF1-204ENST00000518290 PIK3R4Q99570 1358 aa10.84□□□□□ -0.67
ARFGEF1-204ENST00000518290 TMC1Q8TDI8 760 aa10.83□□□□□ -0.68
ARFGEF1-204ENST00000518290 NUDCQ9Y266 331 aa10.82□□□□□ -0.68
ARFGEF1-204ENST00000518290 A0A1W2PP64 1363 aa10.82□□□□□ -0.68
ARFGEF1-204ENST00000518290 METP08581 1390 aa10.82□□□□□ -0.68
ARFGEF1-204ENST00000518290 RGPD1P0DJD0 1748 aa10.81□□□□□ -0.68
ARFGEF1-204ENST00000518290 CGNL1Q0VF96 1302 aa10.81□□□□□ -0.68
ARFGEF1-204ENST00000518290 PNPLA6Q8IY17 1366 aa10.81□□□□□ -0.68
ARFGEF1-204ENST00000518290 TRAK1Q9UPV9 953 aa10.81□□□□□ -0.68
ARFGEF1-204ENST00000518290 HDGFP51858 240 aaKnown RBP10.8□□□□□ -0.68
ARFGEF1-204ENST00000518290 TMEM132EQ6IEE7 984 aa10.8□□□□□ -0.68
ARFGEF1-204ENST00000518290 PTPRUQ92729 1446 aa10.8□□□□□ -0.68
ARFGEF1-204ENST00000518290 FAM9BQ8IZU0 186 aa10.79□□□□□ -0.68
ARFGEF1-204ENST00000518290 EDC4Q6P2E9 1401 aaKnown RBP10.79□□□□□ -0.68
ARFGEF1-204ENST00000518290 PHRF1Q9P1Y6 1649 aaKnown RBP10.79□□□□□ -0.68
ARFGEF1-204ENST00000518290 CHGAP10645 457 aaKnown RBP10.79□□□□□ -0.68
ARFGEF1-204ENST00000518290 TRMT2AQ8IZ69 625 aaKnown RBP10.78□□□□□ -0.68
ARFGEF1-204ENST00000518290 SETD1BQ9UPS6 1966 aaKnown RBP10.78□□□□□ -0.68
ARFGEF1-204ENST00000518290 SSH2Q76I76 1423 aa10.78□□□□□ -0.68
ARFGEF1-204ENST00000518290 ANKARQ7Z5J8 1434 aa10.77□□□□□ -0.69
ARFGEF1-204ENST00000518290 MAP2P11137 1827 aaKnown RBP10.77□□□□□ -0.69
ARFGEF1-204ENST00000518290 PHF23Q9BUL5 403 aaPredicted RBP10.77□□□□□ -0.69
ARFGEF1-204ENST00000518290 AATKQ6ZMQ8 1374 aa10.77□□□□□ -0.69
ARFGEF1-204ENST00000518290 PLEKHH1Q9ULM0 1364 aa10.77□□□□□ -0.69
ARFGEF1-204ENST00000518290 CDK12Q9NYV4 1490 aaPredicted RBP10.76□□□□□ -0.69
ARFGEF1-204ENST00000518290 CC2D1BQ5T0F9 858 aaKnown RBP10.76□□□□□ -0.69
ARFGEF1-204ENST00000518290 POLR3GLQ9BT43 218 aa10.75□□□□□ -0.69
ARFGEF1-204ENST00000518290 PRAM1Q96QH2 718 aa10.75□□□□□ -0.69
ARFGEF1-204ENST00000518290 NKTRP30414 1462 aaKnown RBP10.74□□□□□ -0.69
ARFGEF1-204ENST00000518290 ROBO2Q9HCK4 1378 aa10.74□□□□□ -0.69
ARFGEF1-204ENST00000518290 RGPD8O14715 1765 aaPredicted RBP10.74□□□□□ -0.69
ARFGEF1-204ENST00000518290 PRKCSHP14314 528 aaPredicted RBP10.74□□□□□ -0.69
ARFGEF1-204ENST00000518290 ANP32EQ9BTT0 268 aa10.73□□□□□ -0.69
ARFGEF1-204ENST00000518290 SLC12A5Q9H2X9 1139 aa10.73□□□□□ -0.69
ARFGEF1-204ENST00000518290 TBX22Q9Y458 520 aa10.73□□□□□ -0.69
ARFGEF1-204ENST00000518290 PIK3C2AO00443 1686 aa10.73□□□□□ -0.69
ARFGEF1-204ENST00000518290 PPIP5K1Q6PFW1 1433 aa10.73□□□□□ -0.69
ARFGEF1-204ENST00000518290 CCDC27Q2M243 656 aa10.72□□□□□ -0.69
ARFGEF1-204ENST00000518290 OVOS2A0A0J9YW53 1432 aa10.72□□□□□ -0.69
ARFGEF1-204ENST00000518290 OVOS2Q6IE36 1432 aa10.72□□□□□ -0.69
ARFGEF1-204ENST00000518290 PEAK1Q9H792 1746 aa10.72□□□□□ -0.69
ARFGEF1-204ENST00000518290 ADAMTS8Q9UP79 889 aa10.71□□□□□ -0.69
ARFGEF1-204ENST00000518290 WASLO00401 505 aaPredicted RBP10.71□□□□□ -0.69
ARFGEF1-204ENST00000518290 ESF1Q9H501 851 aaKnown RBP10.71□□□□□ -0.69
ARFGEF1-204ENST00000518290 TERF2IPQ9NYB0 399 aa10.71□□□□□ -0.69
ARFGEF1-204ENST00000518290 MST1RQ04912 1400 aa10.71□□□□□ -0.7
ARFGEF1-204ENST00000518290 CDK19Q9BWU1 502 aa10.71□□□□□ -0.7
ARFGEF1-204ENST00000518290 DNAJC5Q9H3Z4 198 aa10.71□□□□□ -0.7
ARFGEF1-204ENST00000518290 LTKP29376 864 aa10.7□□□□□ -0.7
ARFGEF1-204ENST00000518290 NEFLP07196 543 aa10.7□□□□□ -0.7
ARFGEF1-204ENST00000518290 FKBP8Q14318 412 aa10.7□□□□□ -0.7
ARFGEF1-204ENST00000518290 KIF1AQ12756 1690 aa10.7□□□□□ -0.7
ARFGEF1-204ENST00000518290 USP31Q70CQ4 1352 aa10.69□□□□□ -0.7
ARFGEF1-204ENST00000518290 NUTM2DQ5VT03 806 aaPredicted RBP10.69□□□□□ -0.7
ARFGEF1-204ENST00000518290 CABP2Q9NPB3 220 aa10.69□□□□□ -0.7
ARFGEF1-204ENST00000518290 CAMTA1Q9Y6Y1 1673 aa10.69□□□□□ -0.7
ARFGEF1-204ENST00000518290 STAG3Q9UJ98 1225 aa10.69□□□□□ -0.7
ARFGEF1-204ENST00000518290 TRPM3Q9HCF6 1732 aaPredicted RBP10.69□□□□□ -0.7
ARFGEF1-204ENST00000518290 DLG5Q8TDM6 1919 aa10.68□□□□□ -0.7
ARFGEF1-204ENST00000518290 PLEKHG3A1L390 1219 aa10.68□□□□□ -0.7
ARFGEF1-204ENST00000518290 USP6P35125 1406 aa10.68□□□□□ -0.7
ARFGEF1-204ENST00000518290 LRRC37A3O60309 1634 aa10.68□□□□□ -0.7
ARFGEF1-204ENST00000518290 FYB1O15117 783 aa10.68□□□□□ -0.7
ARFGEF1-204ENST00000518290 THEMISQ8N1K5 641 aaPredicted RBP10.67□□□□□ -0.7
ARFGEF1-204ENST00000518290 PPP4R2Q9NY27 417 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms