RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 ADGRB1O14514 1584 aa18.42■□□□□ 0.54
PABPC1-205ENST00000518196 CARD11Q9BXL7 1154 aa18.41■□□□□ 0.54
PABPC1-205ENST00000518196 ABCC11Q96J66 1382 aa18.41■□□□□ 0.54
PABPC1-205ENST00000518196 NWD1Q149M9 1564 aa18.4■□□□□ 0.54
PABPC1-205ENST00000518196 TRAK1Q9UPV9 953 aa18.39■□□□□ 0.53
PABPC1-205ENST00000518196 GPRASP1Q5JY77 1395 aa18.39■□□□□ 0.53
PABPC1-205ENST00000518196 XRN1Q8IZH2 1706 aaKnown RBP18.38■□□□□ 0.53
PABPC1-205ENST00000518196 STRCP1A6NGW2 1772 aa18.38■□□□□ 0.53
PABPC1-205ENST00000518196 PROSER2Q86WR7 435 aaPredicted RBP18.38■□□□□ 0.53
PABPC1-205ENST00000518196 NKTRP30414 1462 aaKnown RBP18.38■□□□□ 0.53
PABPC1-205ENST00000518196 KNDC1Q76NI1 1749 aa18.37■□□□□ 0.53
PABPC1-205ENST00000518196 PROM2Q8N271 834 aa18.37■□□□□ 0.53
PABPC1-205ENST00000518196 SIRT1Q96EB6 747 aa18.37■□□□□ 0.53
PABPC1-205ENST00000518196 ZNF692Q9BU19 519 aaPredicted RBP18.37■□□□□ 0.53
PABPC1-205ENST00000518196 CPS1P31327 1500 aa18.37■□□□□ 0.53
PABPC1-205ENST00000518196 TECPR2O15040 1411 aa18.36■□□□□ 0.53
PABPC1-205ENST00000518196 DLC1Q96QB1 1528 aa18.35■□□□□ 0.53
PABPC1-205ENST00000518196 PTCH1Q13635 1447 aa18.35■□□□□ 0.53
PABPC1-205ENST00000518196 POGKQ9P215 609 aa18.35■□□□□ 0.53
PABPC1-205ENST00000518196 FAM135BQ49AJ0 1406 aa18.33■□□□□ 0.53
PABPC1-205ENST00000518196 EIF3AQ14152 1382 aaKnown RBP18.33■□□□□ 0.53
PABPC1-205ENST00000518196 ROBO2Q9HCK4 1378 aa18.33■□□□□ 0.53
PABPC1-205ENST00000518196 LTBP4Q8N2S1 1624 aa18.33■□□□□ 0.52
PABPC1-205ENST00000518196 PRAM1Q96QH2 718 aa18.32■□□□□ 0.52
PABPC1-205ENST00000518196 WAPLQ7Z5K2 1190 aa18.31■□□□□ 0.52
PABPC1-205ENST00000518196 LRRC7Q96NW7 1537 aa18.31■□□□□ 0.52
PABPC1-205ENST00000518196 ARHGEF28Q8N1W1 1705 aaKnown RBP18.31■□□□□ 0.52
PABPC1-205ENST00000518196 SPDYE2BA6NHP3 402 aa18.3■□□□□ 0.52
PABPC1-205ENST00000518196 SPDYE6P0CI01 402 aa18.3■□□□□ 0.52
PABPC1-205ENST00000518196 SPDYE2Q495Y8 402 aa18.3■□□□□ 0.52
PABPC1-205ENST00000518196 C14orf37Q86TY3 774 aa18.3■□□□□ 0.52
PABPC1-205ENST00000518196 NCOA3Q9Y6Q9 1424 aa18.3■□□□□ 0.52
PABPC1-205ENST00000518196 TMEM94Q12767 1356 aa18.3■□□□□ 0.52
PABPC1-205ENST00000518196 CENPJQ9HC77 1338 aaPredicted RBP18.29■□□□□ 0.52
PABPC1-205ENST00000518196 SAFB2Q14151 953 aaKnown RBP eCLIP18.28■□□□□ 0.52
PABPC1-205ENST00000518196 RBM33Q96EV2 1170 aaKnown RBP18.28■□□□□ 0.52
PABPC1-205ENST00000518196 FBXO3Q9UK99 471 aa18.28■□□□□ 0.52
PABPC1-205ENST00000518196 USP47Q96K76 1375 aa18.28■□□□□ 0.52
PABPC1-205ENST00000518196 EIF4G2P78344 907 aaKnown RBP eCLIP18.27■□□□□ 0.52
PABPC1-205ENST00000518196 PLEKHH1Q9ULM0 1364 aa18.27■□□□□ 0.51
PABPC1-205ENST00000518196 XIRP1Q702N8 1843 aaKnown RBP18.26■□□□□ 0.51
PABPC1-205ENST00000518196 ST20-MTHFSA0A0A6YYL1 179 aa18.24■□□□□ 0.51
PABPC1-205ENST00000518196 CERKQ8TCT0 537 aa18.24■□□□□ 0.51
PABPC1-205ENST00000518196 C19orf44Q9H6X5 657 aa18.24■□□□□ 0.51
PABPC1-205ENST00000518196 MSH6P52701 1360 aa18.24■□□□□ 0.51
PABPC1-205ENST00000518196 MINK1Q8N4C8 1332 aaPredicted RBP18.23■□□□□ 0.51
PABPC1-205ENST00000518196 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.23■□□□□ 0.51
PABPC1-205ENST00000518196 QRICH2Q9H0J4 1663 aa18.23■□□□□ 0.51
PABPC1-205ENST00000518196 SLC24A1O60721 1099 aa18.23■□□□□ 0.51
PABPC1-205ENST00000518196 ADGRL3Q9HAR2 1447 aa18.23■□□□□ 0.51
PABPC1-205ENST00000518196 NALCNQ8IZF0 1738 aa18.21■□□□□ 0.51
PABPC1-205ENST00000518196 HSPA5P11021 654 aaKnown RBP18.21■□□□□ 0.51
PABPC1-205ENST00000518196 ATF3P18847 181 aa18.21■□□□□ 0.51
PABPC1-205ENST00000518196 IQSEC2Q5JU85 1478 aa18.2■□□□□ 0.5
PABPC1-205ENST00000518196 HIRIP3Q9BW71 556 aaPredicted RBP18.2■□□□□ 0.5
PABPC1-205ENST00000518196 SSUH2Q9Y2M2 353 aa18.2■□□□□ 0.5
PABPC1-205ENST00000518196 SBNO2Q9Y2G9 1366 aa18.18■□□□□ 0.5
PABPC1-205ENST00000518196 DCCP43146 1447 aa18.18■□□□□ 0.5
PABPC1-205ENST00000518196 CADPS2Q86UW7 1296 aa18.18■□□□□ 0.5
PABPC1-205ENST00000518196 EVC2Q86UK5 1308 aa18.18■□□□□ 0.5
PABPC1-205ENST00000518196 ADGRB2O60241 1585 aa18.17■□□□□ 0.5
PABPC1-205ENST00000518196 WASLO00401 505 aaPredicted RBP18.17■□□□□ 0.5
PABPC1-205ENST00000518196 RTN4Q9NQC3 1192 aaKnown RBP18.17■□□□□ 0.5
PABPC1-205ENST00000518196 TESK2Q96S53 571 aa18.16■□□□□ 0.5
PABPC1-205ENST00000518196 CDC42BPGQ6DT37 1551 aa18.16■□□□□ 0.5
PABPC1-205ENST00000518196 TOM1O60784 492 aa18.15■□□□□ 0.5
PABPC1-205ENST00000518196 TMF1P82094 1093 aa18.15■□□□□ 0.5
PABPC1-205ENST00000518196 CDK19Q9BWU1 502 aa18.15■□□□□ 0.5
PABPC1-205ENST00000518196 SRPK2P78362 688 aaKnown RBP18.13■□□□□ 0.49
PABPC1-205ENST00000518196 FMN2Q9NZ56 1722 aa18.12■□□□□ 0.49
PABPC1-205ENST00000518196 CDCA8Q53HL2 280 aa18.12■□□□□ 0.49
PABPC1-205ENST00000518196 NUTM2FA1L443 756 aa18.11■□□□□ 0.49
PABPC1-205ENST00000518196 UBAP1LF5GYI3 381 aa18.11■□□□□ 0.49
PABPC1-205ENST00000518196 AMER1Q5JTC6 1135 aaPredicted RBP18.11■□□□□ 0.49
PABPC1-205ENST00000518196 SLAIN2Q9P270 581 aa18.11■□□□□ 0.49
PABPC1-205ENST00000518196 TULP4Q9NRJ4 1543 aa18.1■□□□□ 0.49
PABPC1-205ENST00000518196 PUS7Q96PZ0 661 aaKnown RBP18.1■□□□□ 0.49
PABPC1-205ENST00000518196 CABP2Q9NPB3 220 aa18.1■□□□□ 0.49
PABPC1-205ENST00000518196 ANKARQ7Z5J8 1434 aa18.09■□□□□ 0.49
PABPC1-205ENST00000518196 MST1RQ04912 1400 aa18.08■□□□□ 0.49
PABPC1-205ENST00000518196 VASPP50552 380 aaPredicted RBP18.08■□□□□ 0.48
PABPC1-205ENST00000518196 NUDT16Q96DE0 195 aaKnown RBP18.08■□□□□ 0.48
PABPC1-205ENST00000518196 C1orf167Q5SNV9 1468 aa18.07■□□□□ 0.48
PABPC1-205ENST00000518196 RGPD8O14715 1765 aaPredicted RBP18.07■□□□□ 0.48
PABPC1-205ENST00000518196 ATAD2Q6PL18 1390 aa18.06■□□□□ 0.48
PABPC1-205ENST00000518196 DISP3Q9P2K9 1392 aa18.06■□□□□ 0.48
PABPC1-205ENST00000518196 ESCO1Q5FWF5 840 aa18.06■□□□□ 0.48
PABPC1-205ENST00000518196 CCDC61Q9Y6R9 512 aa18.06■□□□□ 0.48
PABPC1-205ENST00000518196 PRR36Q9H6K5 1346 aa18.05■□□□□ 0.48
PABPC1-205ENST00000518196 ITSN1Q15811 1721 aa18.04■□□□□ 0.48
PABPC1-205ENST00000518196 PIP4K2BP78356 416 aa18.04■□□□□ 0.48
PABPC1-205ENST00000518196 USP32Q8NFA0 1604 aa18.04■□□□□ 0.48
PABPC1-205ENST00000518196 ATP7BP35670 1465 aa18.03■□□□□ 0.48
PABPC1-205ENST00000518196 ORAI2Q96SN7 254 aa18.03■□□□□ 0.48
PABPC1-205ENST00000518196 POLR3GLQ9BT43 218 aa18.03■□□□□ 0.48
PABPC1-205ENST00000518196 PHF8Q9UPP1 1060 aa18.02■□□□□ 0.48
PABPC1-205ENST00000518196 BRINP3Q76B58 766 aa18.01■□□□□ 0.47
PABPC1-205ENST00000518196 TMC1Q8TDI8 760 aa18.01■□□□□ 0.47
PABPC1-205ENST00000518196 PPIP5K1Q6PFW1 1433 aa18■□□□□ 0.47
PABPC1-205ENST00000518196 PLEKHG3A1L390 1219 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms