RNA–Protein interactions for RNA: ENST00000517980.5

CTNNA1-206, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-206ENST00000517980 RXRBP28702 533 aa25.63■■□□□ 1.69
CTNNA1-206ENST00000517980 PRAG1Q86YV5 1406 aa25.62■■□□□ 1.69
CTNNA1-206ENST00000517980 SOS2Q07890 1332 aaPredicted RBP25.62■■□□□ 1.69
CTNNA1-206ENST00000517980 LRPPRCP42704 1394 aaKnown RBP25.6■■□□□ 1.69
CTNNA1-206ENST00000517980 RAB3GAP2Q9H2M9 1393 aa25.6■■□□□ 1.69
CTNNA1-206ENST00000517980 PLEKHH1Q9ULM0 1364 aa25.6■■□□□ 1.69
CTNNA1-206ENST00000517980 XPCQ01831 940 aaPredicted RBP25.59■■□□□ 1.69
CTNNA1-206ENST00000517980 CFAP70Q5T0N1 1121 aa25.59■■□□□ 1.69
CTNNA1-206ENST00000517980 FOXO3O43524 673 aa25.58■■□□□ 1.69
CTNNA1-206ENST00000517980 NGLY1Q96IV0 654 aa25.58■■□□□ 1.69
CTNNA1-206ENST00000517980 QTRT2Q9H974 415 aaKnown RBP25.58■■□□□ 1.69
CTNNA1-206ENST00000517980 ABCC11Q96J66 1382 aa25.57■■□□□ 1.68
CTNNA1-206ENST00000517980 C14orf93Q9H972 538 aaKnown RBP25.57■■□□□ 1.68
CTNNA1-206ENST00000517980 ACIN1Q9UKV3 1341 aaKnown RBP25.57■■□□□ 1.68
CTNNA1-206ENST00000517980 PIK3C2GO75747 1445 aa25.56■■□□□ 1.68
CTNNA1-206ENST00000517980 LAMC1P11047 1609 aa25.55■■□□□ 1.68
CTNNA1-206ENST00000517980 YTHDC2Q9H6S0 1430 aaKnown RBP25.54■■□□□ 1.68
CTNNA1-206ENST00000517980 TECPR2O15040 1411 aa25.52■■□□□ 1.68
CTNNA1-206ENST00000517980 SAFB2Q14151 953 aaKnown RBP eCLIP25.51■■□□□ 1.67
CTNNA1-206ENST00000517980 UPF1Q92900 1129 aaKnown RBP eCLIP25.51■■□□□ 1.67
CTNNA1-206ENST00000517980 KDM2AQ9Y2K7 1162 aa25.51■■□□□ 1.67
CTNNA1-206ENST00000517980 NPHP3Q7Z494 1330 aa25.51■■□□□ 1.67
CTNNA1-206ENST00000517980 CDC42BPGQ6DT37 1551 aa25.51■■□□□ 1.67
CTNNA1-206ENST00000517980 KNDC1Q76NI1 1749 aa25.49■■□□□ 1.67
CTNNA1-206ENST00000517980 DHX57Q6P158 1386 aaKnown RBP25.48■■□□□ 1.67
CTNNA1-206ENST00000517980 RBM6P78332 1123 aaKnown RBP25.48■■□□□ 1.67
CTNNA1-206ENST00000517980 SIRT1Q96EB6 747 aa25.48■■□□□ 1.67
CTNNA1-206ENST00000517980 RGPD8O14715 1765 aaPredicted RBP25.46■■□□□ 1.67
CTNNA1-206ENST00000517980 PRAM1Q96QH2 718 aa25.46■■□□□ 1.67
CTNNA1-206ENST00000517980 USP21Q9UK80 565 aa25.46■■□□□ 1.67
CTNNA1-206ENST00000517980 PXDNQ92626 1479 aa25.45■■□□□ 1.66
CTNNA1-206ENST00000517980 NRXN1Q9ULB1 1477 aa25.44■■□□□ 1.66
CTNNA1-206ENST00000517980 DCAF11Q8TEB1 546 aa25.43■■□□□ 1.66
CTNNA1-206ENST00000517980 POGKQ9P215 609 aa25.43■■□□□ 1.66
CTNNA1-206ENST00000517980 FMN2Q9NZ56 1722 aa25.43■■□□□ 1.66
CTNNA1-206ENST00000517980 KRT28Q7Z3Y7 464 aa25.42■■□□□ 1.66
CTNNA1-206ENST00000517980 MYOM2P54296 1465 aa25.41■■□□□ 1.66
CTNNA1-206ENST00000517980 FNBP4Q8N3X1 1017 aaPredicted RBP25.41■■□□□ 1.66
CTNNA1-206ENST00000517980 TRAK1Q9UPV9 953 aa25.41■■□□□ 1.66
CTNNA1-206ENST00000517980 CDK12Q9NYV4 1490 aaPredicted RBP25.4■■□□□ 1.66
CTNNA1-206ENST00000517980 PLEKHG5O94827 1062 aa25.4■■□□□ 1.66
CTNNA1-206ENST00000517980 COL22A1Q8NFW1 1626 aaPredicted RBP25.4■■□□□ 1.66
CTNNA1-206ENST00000517980 PHF8Q9UPP1 1060 aa25.39■■□□□ 1.66
CTNNA1-206ENST00000517980 RGS12O14924 1447 aa25.38■■□□□ 1.65
CTNNA1-206ENST00000517980 TRPC5Q9UL62 973 aaPredicted RBP25.38■■□□□ 1.65
CTNNA1-206ENST00000517980 SPATA31A3Q5VYP0 1347 aa25.37■■□□□ 1.65
CTNNA1-206ENST00000517980 HRCP23327 699 aa25.36■■□□□ 1.65
CTNNA1-206ENST00000517980 HIRIP3Q9BW71 556 aaPredicted RBP25.36■■□□□ 1.65
CTNNA1-206ENST00000517980 PMFBP1Q8TBY8 1022 aa25.35■■□□□ 1.65
CTNNA1-206ENST00000517980 PSME1Q06323 249 aa25.33■■□□□ 1.65
CTNNA1-206ENST00000517980 LMOD2Q6P5Q4 547 aa25.33■■□□□ 1.65
CTNNA1-206ENST00000517980 CABLES1Q8TDN4 633 aa25.33■■□□□ 1.65
CTNNA1-206ENST00000517980 MINK1Q8N4C8 1332 aaPredicted RBP25.33■■□□□ 1.64
CTNNA1-206ENST00000517980 MARF1Q9Y4F3 1742 aaKnown RBP25.32■■□□□ 1.64
CTNNA1-206ENST00000517980 KIF1AQ12756 1690 aa25.3■■□□□ 1.64
CTNNA1-206ENST00000517980 BCL9LQ86UU0 1499 aa25.3■■□□□ 1.64
CTNNA1-206ENST00000517980 ATRNO75882 1429 aa25.29■■□□□ 1.64
CTNNA1-206ENST00000517980 ADGRB1O14514 1584 aa25.29■■□□□ 1.64
CTNNA1-206ENST00000517980 HAP1P54257 671 aaPredicted RBP25.28■■□□□ 1.64
CTNNA1-206ENST00000517980 DLC1Q96QB1 1528 aa25.27■■□□□ 1.64
CTNNA1-206ENST00000517980 GJD4Q96KN9 370 aaPredicted RBP25.26■■□□□ 1.63
CTNNA1-206ENST00000517980 USP32Q8NFA0 1604 aa25.24■■□□□ 1.63
CTNNA1-206ENST00000517980 UNC5CLQ8IV45 518 aa25.24■■□□□ 1.63
CTNNA1-206ENST00000517980 STAC3Q96MF2 364 aa25.24■■□□□ 1.63
CTNNA1-206ENST00000517980 PRR36Q9H6K5 1346 aa25.23■■□□□ 1.63
CTNNA1-206ENST00000517980 TNS3Q68CZ2 1445 aa25.22■■□□□ 1.63
CTNNA1-206ENST00000517980 WASLO00401 505 aaPredicted RBP25.22■■□□□ 1.63
CTNNA1-206ENST00000517980 SBNO1A3KN83 1393 aa25.2■■□□□ 1.63
CTNNA1-206ENST00000517980 ANKARQ7Z5J8 1434 aa25.2■■□□□ 1.62
CTNNA1-206ENST00000517980 ATAD2Q6PL18 1390 aa25.18■■□□□ 1.62
CTNNA1-206ENST00000517980 SLIT2O94813 1529 aa25.17■■□□□ 1.62
CTNNA1-206ENST00000517980 FAM83GA6ND36 823 aa25.17■■□□□ 1.62
CTNNA1-206ENST00000517980 NGDNQ8NEJ9 315 aaKnown RBP25.17■■□□□ 1.62
CTNNA1-206ENST00000517980 ADGRB2O60241 1585 aa25.16■■□□□ 1.62
CTNNA1-206ENST00000517980 NBPF1Q3BBV0 1214 aa25.15■■□□□ 1.62
CTNNA1-206ENST00000517980 CCDC9Q9Y3X0 531 aaKnown RBP25.15■■□□□ 1.62
CTNNA1-206ENST00000517980 ARHGEF10O15013 1369 aa25.15■■□□□ 1.62
CTNNA1-206ENST00000517980 PAK3O75914 559 aaPredicted RBP25.14■■□□□ 1.62
CTNNA1-206ENST00000517980 GPRASP1Q5JY77 1395 aa25.14■■□□□ 1.61
CTNNA1-206ENST00000517980 RALGAPBQ86X10 1494 aa25.14■■□□□ 1.61
CTNNA1-206ENST00000517980 NUDT16Q96DE0 195 aaKnown RBP25.13■■□□□ 1.61
CTNNA1-206ENST00000517980 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.12■■□□□ 1.61
CTNNA1-206ENST00000517980 CDK19Q9BWU1 502 aa25.12■■□□□ 1.61
CTNNA1-206ENST00000517980 GLI3P10071 1580 aa25.12■■□□□ 1.61
CTNNA1-206ENST00000517980 ARHGEF28Q8N1W1 1705 aaKnown RBP25.12■■□□□ 1.61
CTNNA1-206ENST00000517980 TULP4Q9NRJ4 1543 aa25.12■■□□□ 1.61
CTNNA1-206ENST00000517980 TRPM3Q9HCF6 1732 aaPredicted RBP25.11■■□□□ 1.61
CTNNA1-206ENST00000517980 EIF3AQ14152 1382 aaKnown RBP25.1■■□□□ 1.61
CTNNA1-206ENST00000517980 VPS72Q15906 364 aa25.1■■□□□ 1.61
CTNNA1-206ENST00000517980 ABCA3Q99758 1704 aa25.09■■□□□ 1.61
CTNNA1-206ENST00000517980 BRWD3Q6RI45 1802 aa25.09■■□□□ 1.61
CTNNA1-206ENST00000517980 SEPT12Q8IYM1 358 aa25.08■■□□□ 1.61
CTNNA1-206ENST00000517980 PLCH1Q4KWH8 1693 aa25.07■■□□□ 1.6
CTNNA1-206ENST00000517980 EP400Q96L91 3159 aa25.06■■□□□ 1.6
CTNNA1-206ENST00000517980 BTG4Q9NY30 223 aa25.06■■□□□ 1.6
CTNNA1-206ENST00000517980 ALS2Q96Q42 1657 aa25.06■■□□□ 1.6
CTNNA1-206ENST00000517980 NUTM2GQ5VZR2 741 aa25.05■■□□□ 1.6
CTNNA1-206ENST00000517980 SIN3AQ96ST3 1273 aa25.04■■□□□ 1.6
CTNNA1-206ENST00000517980 NWD2Q9ULI1 1742 aa25.03■■□□□ 1.6
CTNNA1-206ENST00000517980 CCDC125Q86Z20 511 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms