RNA–Protein interactions for RNA: ENST00000516817.1

RNU6-1308P-201, Transcript of RNA, U6 small nuclear 1308, pseudogene, humanhuman

BASIC

Gene RNU6-1308P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1308P-201ENST00000516817 LMOD1P29536 600 aaPredicted RBP8.31□□□□□ -1.08
RNU6-1308P-201ENST00000516817 SRPK2P78362 688 aaKnown RBP8.31□□□□□ -1.08
RNU6-1308P-201ENST00000516817 CTDSPL2Q05D32 466 aa8.31□□□□□ -1.08
RNU6-1308P-201ENST00000516817 TSC1Q92574 1164 aa8.31□□□□□ -1.08
RNU6-1308P-201ENST00000516817 HMX1Q9NP08 348 aaPredicted RBP8.31□□□□□ -1.08
RNU6-1308P-201ENST00000516817 SEMA3FQ13275 785 aa8.3□□□□□ -1.08
RNU6-1308P-201ENST00000516817 SND1Q7KZF4 910 aaKnown RBP eCLIP8.3□□□□□ -1.08
RNU6-1308P-201ENST00000516817 VRTNQ9H8Y1 702 aa8.3□□□□□ -1.08
RNU6-1308P-201ENST00000516817 LHX6Q9UPM6 363 aa8.3□□□□□ -1.08
RNU6-1308P-201ENST00000516817 KHSRPQ92945 711 aaKnown RBP eCLIP8.29□□□□□ -1.08
RNU6-1308P-201ENST00000516817 IVNS1ABPQ9Y6Y0 642 aa8.29□□□□□ -1.08
RNU6-1308P-201ENST00000516817 GPR37L1O60883 481 aa8.28□□□□□ -1.08
RNU6-1308P-201ENST00000516817 HDGFP51858 240 aaKnown RBP8.28□□□□□ -1.08
RNU6-1308P-201ENST00000516817 EIF4G2P78344 907 aaKnown RBP eCLIP8.28□□□□□ -1.08
RNU6-1308P-201ENST00000516817 GPR153Q6NV75 609 aa8.28□□□□□ -1.08
RNU6-1308P-201ENST00000516817 PCDHGC3Q9UN70 934 aa8.28□□□□□ -1.08
RNU6-1308P-201ENST00000516817 C6orf229H3BNL8 230 aa8.27□□□□□ -1.09
RNU6-1308P-201ENST00000516817 SLF2Q8IX21 1173 aa8.27□□□□□ -1.09
RNU6-1308P-201ENST00000516817 TFIP11Q9UBB9 837 aaKnown RBP8.27□□□□□ -1.09
RNU6-1308P-201ENST00000516817 MYT1LQ9UL68 1186 aa8.27□□□□□ -1.09
RNU6-1308P-201ENST00000516817 C3orf80F5H4A9 247 aa8.26□□□□□ -1.09
RNU6-1308P-201ENST00000516817 HOXB3P14651 431 aaPredicted RBP8.26□□□□□ -1.09
RNU6-1308P-201ENST00000516817 LRRN4Q8WUT4 740 aa8.26□□□□□ -1.09
RNU6-1308P-201ENST00000516817 MAFBQ9Y5Q3 323 aaPredicted RBP8.26□□□□□ -1.09
RNU6-1308P-201ENST00000516817 UCN2Q96RP3 112 aa8.25□□□□□ -1.09
RNU6-1308P-201ENST00000516817 CFAP99D6REC4 459 aa8.24□□□□□ -1.09
RNU6-1308P-201ENST00000516817 SMAPO00193 183 aa8.24□□□□□ -1.09
RNU6-1308P-201ENST00000516817 ATP9BO43861 1147 aa8.24□□□□□ -1.09
RNU6-1308P-201ENST00000516817 GUCA2AQ02747 115 aa8.24□□□□□ -1.09
RNU6-1308P-201ENST00000516817 PRR7Q8TB68 274 aa8.24□□□□□ -1.09
RNU6-1308P-201ENST00000516817 GNEQ9Y223 722 aaKnown RBP8.24□□□□□ -1.09
RNU6-1308P-201ENST00000516817 SWT1Q5T5J6 900 aaKnown RBP8.23□□□□□ -1.09
RNU6-1308P-201ENST00000516817 TMEM88BA6NKF7 163 aa8.22□□□□□ -1.09
RNU6-1308P-201ENST00000516817 SLC10A3P09131 477 aa8.22□□□□□ -1.09
RNU6-1308P-201ENST00000516817 ELOAQ14241 798 aaKnown RBP8.22□□□□□ -1.09
RNU6-1308P-201ENST00000516817 CCER1Q8TC90 406 aaPredicted RBP8.22□□□□□ -1.09
RNU6-1308P-201ENST00000516817 PROX2Q3B8N5 592 aa8.21□□□□□ -1.1
RNU6-1308P-201ENST00000516817 NFATC2IPQ8NCF5 419 aa8.21□□□□□ -1.1
RNU6-1308P-201ENST00000516817 ZNF592Q92610 1267 aa8.21□□□□□ -1.1
RNU6-1308P-201ENST00000516817 KCNK17Q96T54 332 aa8.21□□□□□ -1.1
RNU6-1308P-201ENST00000516817 KIAA1468Q9P260 1216 aa8.21□□□□□ -1.1
RNU6-1308P-201ENST00000516817 ATP6V1AP38606 617 aa8.2□□□□□ -1.1
RNU6-1308P-201ENST00000516817 DESI1Q6ICB0 168 aa8.2□□□□□ -1.1
RNU6-1308P-201ENST00000516817 RETREG3Q86VR2 466 aa8.2□□□□□ -1.1
RNU6-1308P-201ENST00000516817 HLA-CQ95604 372 aa8.2□□□□□ -1.1
RNU6-1308P-201ENST00000516817 ZNF428Q96B54 188 aa8.2□□□□□ -1.1
RNU6-1308P-201ENST00000516817 FUT2Q10981 343 aa8.19□□□□□ -1.1
RNU6-1308P-201ENST00000516817 NR1H3Q13133 447 aa8.19□□□□□ -1.1
RNU6-1308P-201ENST00000516817 NR6A1Q15406 480 aa8.19□□□□□ -1.1
RNU6-1308P-201ENST00000516817 CDCA8Q53HL2 280 aa8.19□□□□□ -1.1
RNU6-1308P-201ENST00000516817 TBC1D9Q6ZT07 1266 aa8.19□□□□□ -1.1
RNU6-1308P-201ENST00000516817 CFHP08603 1231 aa8.18□□□□□ -1.1
RNU6-1308P-201ENST00000516817 ERCC3P19447 782 aa8.18□□□□□ -1.1
RNU6-1308P-201ENST00000516817 Q3C1V9 767 aa8.18□□□□□ -1.1
RNU6-1308P-201ENST00000516817 KMT5BQ4FZB7 885 aa8.18□□□□□ -1.1
RNU6-1308P-201ENST00000516817 EPS8L1Q8TE68 723 aa8.18□□□□□ -1.1
RNU6-1308P-201ENST00000516817 RABGEF1Q9UJ41 708 aa8.18□□□□□ -1.1
RNU6-1308P-201ENST00000516817 CARNS1A5YM72 827 aa8.17□□□□□ -1.1
RNU6-1308P-201ENST00000516817 ZBED2Q9BTP6 218 aa8.17□□□□□ -1.1
RNU6-1308P-201ENST00000516817 ZC3H4Q9UPT8 1303 aaKnown RBP8.17□□□□□ -1.1
RNU6-1308P-201ENST00000516817 SNPHO15079 494 aa8.16□□□□□ -1.1
RNU6-1308P-201ENST00000516817 POTEIP0CG38 1075 aa8.16□□□□□ -1.1
RNU6-1308P-201ENST00000516817 FAM98CQ17RN3 349 aaKnown RBP8.16□□□□□ -1.1
RNU6-1308P-201ENST00000516817 ZBBXA8MT70 800 aa8.15□□□□□ -1.1
RNU6-1308P-201ENST00000516817 PLEKHM2Q8IWE5 1019 aa8.15□□□□□ -1.1
RNU6-1308P-201ENST00000516817 SCUBE2Q9NQ36 999 aa8.15□□□□□ -1.1
RNU6-1308P-201ENST00000516817 USP17L3A6NCW0 530 aa8.14□□□□□ -1.11
RNU6-1308P-201ENST00000516817 USP17L4A6NCW7 530 aa8.14□□□□□ -1.11
RNU6-1308P-201ENST00000516817 HOXB1P14653 301 aaPredicted RBP8.14□□□□□ -1.11
RNU6-1308P-201ENST00000516817 KANK4Q5T7N3 995 aaPredicted RBP8.14□□□□□ -1.11
RNU6-1308P-201ENST00000516817 USP17L2Q6R6M4 530 aa8.14□□□□□ -1.11
RNU6-1308P-201ENST00000516817 MAMSTRQ6ZN01 415 aa8.14□□□□□ -1.11
RNU6-1308P-201ENST00000516817 USP17L1Q7RTZ2 530 aa8.14□□□□□ -1.11
RNU6-1308P-201ENST00000516817 SLC4A5Q9BY07 1137 aa8.14□□□□□ -1.11
RNU6-1308P-201ENST00000516817 NOVA2Q9UNW9 492 aaKnown RBP8.14□□□□□ -1.11
RNU6-1308P-201ENST00000516817 FAM196BA6NMK8 535 aa8.13□□□□□ -1.11
RNU6-1308P-201ENST00000516817 ARID4AP29374 1257 aaPredicted RBP8.13□□□□□ -1.11
RNU6-1308P-201ENST00000516817 PRR14Q9BWN1 585 aa8.13□□□□□ -1.11
RNU6-1308P-201ENST00000516817 USP17L5A8MUK1 530 aa8.12□□□□□ -1.11
RNU6-1308P-201ENST00000516817 PER1O15534 1290 aaPredicted RBP8.12□□□□□ -1.11
RNU6-1308P-201ENST00000516817 FBXO45P0C2W1 286 aa8.12□□□□□ -1.11
RNU6-1308P-201ENST00000516817 MCCD1P59942 119 aaPredicted RBP8.12□□□□□ -1.11
RNU6-1308P-201ENST00000516817 TMEM164Q5U3C3 297 aa8.12□□□□□ -1.11
RNU6-1308P-201ENST00000516817 LYPD8Q6UX82 237 aa8.12□□□□□ -1.11
RNU6-1308P-201ENST00000516817 LAPTM4BQ86VI4 370 aa8.12□□□□□ -1.11
RNU6-1308P-201ENST00000516817 SEPT9Q9UHD8 586 aaPredicted RBP8.12□□□□□ -1.11
RNU6-1308P-201ENST00000516817 LZTS3O60299 673 aaPredicted RBP8.11□□□□□ -1.11
RNU6-1308P-201ENST00000516817 RNF40O75150 1001 aa8.11□□□□□ -1.11
RNU6-1308P-201ENST00000516817 SKIP12755 728 aa8.11□□□□□ -1.11
RNU6-1308P-201ENST00000516817 LARP1Q6PKG0 1096 aaKnown RBP8.11□□□□□ -1.11
RNU6-1308P-201ENST00000516817 TXNDC2Q86VQ3 553 aa8.11□□□□□ -1.11
RNU6-1308P-201ENST00000516817 SYMPKQ92797 1274 aaKnown RBP8.11□□□□□ -1.11
RNU6-1308P-201ENST00000516817 NBPF3Q9H094 633 aa8.11□□□□□ -1.11
RNU6-1308P-201ENST00000516817 FKBPLQ9UIM3 349 aa8.11□□□□□ -1.11
RNU6-1308P-201ENST00000516817 ZMIZ1Q9ULJ6 1067 aa8.11□□□□□ -1.11
RNU6-1308P-201ENST00000516817 RBM47A0AV96 593 aaKnown RBP8.1□□□□□ -1.11
RNU6-1308P-201ENST00000516817 STK32AQ8WU08 396 aa8.1□□□□□ -1.11
RNU6-1308P-201ENST00000516817 SHROOM4Q9ULL8 1493 aa8.09□□□□□ -1.11
RNU6-1308P-201ENST00000516817 USP17L15C9J2P7 530 aa8.09□□□□□ -1.11
RNU6-1308P-201ENST00000516817 USP17L10C9JJH3 530 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms