RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 PRDM9Q9NQV7 894 aa6.71□□□□□ -1.34
SCARNA16.2-201ENST00000516520 ZBTB24O43167 697 aaPredicted RBP6.7□□□□□ -1.34
SCARNA16.2-201ENST00000516520 CD2BP2O95400 341 aaKnown RBP6.7□□□□□ -1.34
SCARNA16.2-201ENST00000516520 MMP16P51512 607 aa6.7□□□□□ -1.34
SCARNA16.2-201ENST00000516520 GDF9O60383 454 aa6.69□□□□□ -1.34
SCARNA16.2-201ENST00000516520 DGAT1O75907 488 aa6.69□□□□□ -1.34
SCARNA16.2-201ENST00000516520 SSTR3P32745 418 aaPredicted RBP6.69□□□□□ -1.34
SCARNA16.2-201ENST00000516520 PKDCCQ504Y2 493 aa6.69□□□□□ -1.34
SCARNA16.2-201ENST00000516520 DXOO77932 396 aaKnown RBP6.68□□□□□ -1.34
SCARNA16.2-201ENST00000516520 REPIN1Q9BWE0 567 aaKnown RBP6.68□□□□□ -1.34
SCARNA16.2-201ENST00000516520 TNFRSF10AO00220 468 aa6.67□□□□□ -1.34
SCARNA16.2-201ENST00000516520 LCE2BO14633 110 aa6.67□□□□□ -1.34
SCARNA16.2-201ENST00000516520 GIGYF2Q6Y7W6 1299 aaKnown RBP6.67□□□□□ -1.34
SCARNA16.2-201ENST00000516520 HLA-CQ95604 372 aa6.67□□□□□ -1.34
SCARNA16.2-201ENST00000516520 FDX1P10109 184 aa6.66□□□□□ -1.34
SCARNA16.2-201ENST00000516520 RETREG3Q86VR2 466 aa6.66□□□□□ -1.34
SCARNA16.2-201ENST00000516520 AK7Q96M32 723 aa6.66□□□□□ -1.34
SCARNA16.2-201ENST00000516520 FAM187AA6NFU0 413 aa6.65□□□□□ -1.34
SCARNA16.2-201ENST00000516520 JUNDP17535 347 aa6.65□□□□□ -1.34
SCARNA16.2-201ENST00000516520 GUCA2AQ02747 115 aa6.65□□□□□ -1.34
SCARNA16.2-201ENST00000516520 FOXC1Q12948 553 aa6.65□□□□□ -1.34
SCARNA16.2-201ENST00000516520 DIXDC1Q155Q3 683 aa6.65□□□□□ -1.34
SCARNA16.2-201ENST00000516520 SPIRE2Q8WWL2 714 aa6.65□□□□□ -1.34
SCARNA16.2-201ENST00000516520 PKD2L1Q9P0L9 805 aa6.65□□□□□ -1.34
SCARNA16.2-201ENST00000516520 TRIM66O15016 1216 aa6.64□□□□□ -1.35
SCARNA16.2-201ENST00000516520 C6orf229H3BNL8 230 aa6.63□□□□□ -1.35
SCARNA16.2-201ENST00000516520 TRIM32Q13049 653 aa6.63□□□□□ -1.35
SCARNA16.2-201ENST00000516520 PARP9Q8IXQ6 854 aa6.63□□□□□ -1.35
SCARNA16.2-201ENST00000516520 CYP4X1Q8N118 509 aa6.63□□□□□ -1.35
SCARNA16.2-201ENST00000516520 CCDC24Q8N4L8 307 aa6.63□□□□□ -1.35
SCARNA16.2-201ENST00000516520 BEGAINQ9BUH8 593 aa6.63□□□□□ -1.35
SCARNA16.2-201ENST00000516520 WNT7AO00755 349 aa6.62□□□□□ -1.35
SCARNA16.2-201ENST00000516520 GJA5P36382 358 aa6.62□□□□□ -1.35
SCARNA16.2-201ENST00000516520 MYT1Q01538 1121 aa6.62□□□□□ -1.35
SCARNA16.2-201ENST00000516520 MOXD2PA6NHM9 499 aa6.61□□□□□ -1.35
SCARNA16.2-201ENST00000516520 SPDYE5A6NIY4 337 aa6.61□□□□□ -1.35
SCARNA16.2-201ENST00000516520 SYMPKQ92797 1274 aaKnown RBP6.61□□□□□ -1.35
SCARNA16.2-201ENST00000516520 NUDT12Q9BQG2 462 aa6.61□□□□□ -1.35
SCARNA16.2-201ENST00000516520 TOR4AQ9NXH8 423 aa6.61□□□□□ -1.35
SCARNA16.2-201ENST00000516520 PCDHGC3Q9UN70 934 aa6.61□□□□□ -1.35
SCARNA16.2-201ENST00000516520 TTC24A2A3L6 582 aaPredicted RBP6.59□□□□□ -1.35
SCARNA16.2-201ENST00000516520 MS4A1P11836 297 aa6.59□□□□□ -1.35
SCARNA16.2-201ENST00000516520 NDUFV2P19404 249 aa6.59□□□□□ -1.35
SCARNA16.2-201ENST00000516520 WNT7BP56706 349 aa6.59□□□□□ -1.35
SCARNA16.2-201ENST00000516520 MTMR2Q13614 643 aa6.59□□□□□ -1.35
SCARNA16.2-201ENST00000516520 ZNF787Q6DD87 383 aa6.59□□□□□ -1.35
SCARNA16.2-201ENST00000516520 TBC1D2Q9BYX2 928 aa6.59□□□□□ -1.35
SCARNA16.2-201ENST00000516520 AVPP01185 164 aa6.58□□□□□ -1.36
SCARNA16.2-201ENST00000516520 CCNYL3P0C7X3 344 aa6.58□□□□□ -1.36
SCARNA16.2-201ENST00000516520 PDE4DQ08499 809 aa6.58□□□□□ -1.36
SCARNA16.2-201ENST00000516520 PTPRNQ16849 979 aa6.58□□□□□ -1.36
SCARNA16.2-201ENST00000516520 CTC1Q2NKJ3 1217 aa6.58□□□□□ -1.36
SCARNA16.2-201ENST00000516520 RSBN1LQ6PCB5 846 aaPredicted RBP6.58□□□□□ -1.36
SCARNA16.2-201ENST00000516520 CRIPAKQ8N1N5 446 aa6.58□□□□□ -1.36
SCARNA16.2-201ENST00000516520 SNIP1Q8TAD8 396 aaKnown RBP6.58□□□□□ -1.36
SCARNA16.2-201ENST00000516520 DESI1Q6ICB0 168 aa6.57□□□□□ -1.36
SCARNA16.2-201ENST00000516520 PRR7Q8TB68 274 aa6.57□□□□□ -1.36
SCARNA16.2-201ENST00000516520 SPTLC1O15269 473 aa6.56□□□□□ -1.36
SCARNA16.2-201ENST00000516520 BCANQ96GW7 911 aa6.56□□□□□ -1.36
SCARNA16.2-201ENST00000516520 MRGPRX2Q96LB1 330 aa6.56□□□□□ -1.36
SCARNA16.2-201ENST00000516520 ZBTB3Q9H5J0 574 aa6.56□□□□□ -1.36
SCARNA16.2-201ENST00000516520 SLC24A3Q9HC58 644 aa6.56□□□□□ -1.36
SCARNA16.2-201ENST00000516520 RC3H1Q5TC82 1133 aaKnown RBP6.55□□□□□ -1.36
SCARNA16.2-201ENST00000516520 PRPF38BQ5VTL8 546 aaKnown RBP6.55□□□□□ -1.36
SCARNA16.2-201ENST00000516520 AAASQ9NRG9 546 aa6.55□□□□□ -1.36
SCARNA16.2-201ENST00000516520 AXIN1O15169 862 aa6.54□□□□□ -1.36
SCARNA16.2-201ENST00000516520 SMCPP49901 116 aaPredicted RBP6.54□□□□□ -1.36
SCARNA16.2-201ENST00000516520 SKOR1P84550 965 aa6.54□□□□□ -1.36
SCARNA16.2-201ENST00000516520 RIC3Q7Z5B4 369 aa6.54□□□□□ -1.36
SCARNA16.2-201ENST00000516520 EVA1BQ9NVM1 165 aa6.54□□□□□ -1.36
SCARNA16.2-201ENST00000516520 ST8SIA5O15466 376 aa6.53□□□□□ -1.36
SCARNA16.2-201ENST00000516520 SLC24A1O60721 1099 aa6.53□□□□□ -1.36
SCARNA16.2-201ENST00000516520 SMPD1P17405 629 aa6.53□□□□□ -1.36
SCARNA16.2-201ENST00000516520 KCNH2Q12809 1159 aa6.53□□□□□ -1.36
SCARNA16.2-201ENST00000516520 TUSC1Q2TAM9 212 aa6.53□□□□□ -1.36
SCARNA16.2-201ENST00000516520 PTCRAQ6ISU1 281 aaPredicted RBP6.53□□□□□ -1.36
SCARNA16.2-201ENST00000516520 HRCP23327 699 aa6.52□□□□□ -1.37
SCARNA16.2-201ENST00000516520 MYSM1Q5VVJ2 828 aa6.52□□□□□ -1.37
SCARNA16.2-201ENST00000516520 EHBP1Q8NDI1 1231 aa6.52□□□□□ -1.37
SCARNA16.2-201ENST00000516520 UNC93B1Q9H1C4 597 aa6.52□□□□□ -1.37
SCARNA16.2-201ENST00000516520 PCDHB15Q9Y5E8 787 aa6.52□□□□□ -1.37
SCARNA16.2-201ENST00000516520 LYPD8Q6UX82 237 aa6.51□□□□□ -1.37
SCARNA16.2-201ENST00000516520 RSPH6AQ9H0K4 717 aa6.51□□□□□ -1.37
SCARNA16.2-201ENST00000516520 CFAP99D6REC4 459 aa6.5□□□□□ -1.37
SCARNA16.2-201ENST00000516520 J3QL48 77 aa6.5□□□□□ -1.37
SCARNA16.2-201ENST00000516520 SH3BP2P78314 561 aa6.5□□□□□ -1.37
SCARNA16.2-201ENST00000516520 CSPP1Q1MSJ5 1256 aa6.5□□□□□ -1.37
SCARNA16.2-201ENST00000516520 NUTM2BA6NNL0 878 aaPredicted RBP6.49□□□□□ -1.37
SCARNA16.2-201ENST00000516520 NUTM2EB1AL46 878 aaPredicted RBP6.49□□□□□ -1.37
SCARNA16.2-201ENST00000516520 CTHP32929 405 aa6.49□□□□□ -1.37
SCARNA16.2-201ENST00000516520 NUTM2DQ5VT03 806 aaPredicted RBP6.49□□□□□ -1.37
SCARNA16.2-201ENST00000516520 NUTM2AQ8IVF1 878 aaPredicted RBP6.49□□□□□ -1.37
SCARNA16.2-201ENST00000516520 CABLES1Q8TDN4 633 aa6.49□□□□□ -1.37
SCARNA16.2-201ENST00000516520 LIMD1Q9UGP4 676 aa6.49□□□□□ -1.37
SCARNA16.2-201ENST00000516520 ALDH1A1P00352 501 aa6.48□□□□□ -1.37
SCARNA16.2-201ENST00000516520 CLK2P49760 499 aaKnown RBP6.48□□□□□ -1.37
SCARNA16.2-201ENST00000516520 LINC01559Q495D7 138 aa6.48□□□□□ -1.37
SCARNA16.2-201ENST00000516520 ZNF511Q8NB15 262 aa6.48□□□□□ -1.37
SCARNA16.2-201ENST00000516520 HELBQ8NG08 1087 aaPredicted RBP6.48□□□□□ -1.37
SCARNA16.2-201ENST00000516520 BAP1Q92560 729 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms