RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 EPS8L1Q8TE68 723 aa5.56□□□□□ -1.52
SCARNA15.2-201ENST00000516409 KCNK17Q96T54 332 aa5.56□□□□□ -1.52
SCARNA15.2-201ENST00000516409 USTQ9Y2C2 406 aa5.56□□□□□ -1.52
SCARNA15.2-201ENST00000516409 PSDA5PKW4 1024 aaPredicted RBP5.55□□□□□ -1.52
SCARNA15.2-201ENST00000516409 PALM3A6NDB9 673 aaPredicted RBP5.55□□□□□ -1.52
SCARNA15.2-201ENST00000516409 POTEJP0CG39 1038 aa5.55□□□□□ -1.52
SCARNA15.2-201ENST00000516409 LMOD1P29536 600 aaPredicted RBP5.55□□□□□ -1.52
SCARNA15.2-201ENST00000516409 SWT1Q5T5J6 900 aaKnown RBP5.55□□□□□ -1.52
SCARNA15.2-201ENST00000516409 ZNF428Q96B54 188 aa5.55□□□□□ -1.52
SCARNA15.2-201ENST00000516409 UCN2Q96RP3 112 aa5.55□□□□□ -1.52
SCARNA15.2-201ENST00000516409 C6orf229H3BNL8 230 aa5.54□□□□□ -1.52
SCARNA15.2-201ENST00000516409 BRD1O95696 1058 aa5.54□□□□□ -1.52
SCARNA15.2-201ENST00000516409 KCNA1Q09470 495 aa5.54□□□□□ -1.52
SCARNA15.2-201ENST00000516409 CDCA8Q53HL2 280 aa5.54□□□□□ -1.52
SCARNA15.2-201ENST00000516409 RSPH4AQ5TD94 716 aa5.54□□□□□ -1.52
SCARNA15.2-201ENST00000516409 ALG2Q9H553 416 aa5.54□□□□□ -1.52
SCARNA15.2-201ENST00000516409 KIAA1468Q9P260 1216 aa5.54□□□□□ -1.52
SCARNA15.2-201ENST00000516409 RBM25P49756 843 aaKnown RBP5.53□□□□□ -1.52
SCARNA15.2-201ENST00000516409 PRR7Q8TB68 274 aa5.53□□□□□ -1.52
SCARNA15.2-201ENST00000516409 SYMPKQ92797 1274 aaKnown RBP5.53□□□□□ -1.52
SCARNA15.2-201ENST00000516409 TFIP11Q9UBB9 837 aaKnown RBP5.53□□□□□ -1.52
SCARNA15.2-201ENST00000516409 PATL2C9JE40 543 aaKnown RBP5.52□□□□□ -1.53
SCARNA15.2-201ENST00000516409 FUT2Q10981 343 aa5.52□□□□□ -1.53
SCARNA15.2-201ENST00000516409 NR6A1Q15406 480 aa5.52□□□□□ -1.53
SCARNA15.2-201ENST00000516409 ZBED2Q9BTP6 218 aa5.52□□□□□ -1.53
SCARNA15.2-201ENST00000516409 SEPT9Q9UHD8 586 aaPredicted RBP5.52□□□□□ -1.53
SCARNA15.2-201ENST00000516409 IVNS1ABPQ9Y6Y0 642 aa5.52□□□□□ -1.53
SCARNA15.2-201ENST00000516409 POTEB2H3BUK9 544 aa5.5□□□□□ -1.53
SCARNA15.2-201ENST00000516409 PER1O15534 1290 aaPredicted RBP5.5□□□□□ -1.53
SCARNA15.2-201ENST00000516409 CFHP08603 1231 aa5.5□□□□□ -1.53
SCARNA15.2-201ENST00000516409 PSEN2P49810 448 aa5.5□□□□□ -1.53
SCARNA15.2-201ENST00000516409 SEMA3FQ13275 785 aa5.5□□□□□ -1.53
SCARNA15.2-201ENST00000516409 TBC1D9Q6ZT07 1266 aa5.5□□□□□ -1.53
SCARNA15.2-201ENST00000516409 SLF2Q8IX21 1173 aa5.5□□□□□ -1.53
SCARNA15.2-201ENST00000516409 MAFBQ9Y5Q3 323 aaPredicted RBP5.5□□□□□ -1.53
SCARNA15.2-201ENST00000516409 TMEM88BA6NKF7 163 aa5.49□□□□□ -1.53
SCARNA15.2-201ENST00000516409 SOX11P35716 441 aa5.49□□□□□ -1.53
SCARNA15.2-201ENST00000516409 KCNH8Q96L42 1107 aa5.49□□□□□ -1.53
SCARNA15.2-201ENST00000516409 VRTNQ9H8Y1 702 aa5.49□□□□□ -1.53
SCARNA15.2-201ENST00000516409 RNF40O75150 1001 aa5.48□□□□□ -1.53
SCARNA15.2-201ENST00000516409 ATG7O95352 703 aa5.48□□□□□ -1.53
SCARNA15.2-201ENST00000516409 HOXB1P14653 301 aaPredicted RBP5.48□□□□□ -1.53
SCARNA15.2-201ENST00000516409 GRIPAP1Q4V328 841 aa5.48□□□□□ -1.53
SCARNA15.2-201ENST00000516409 HDGFP51858 240 aaKnown RBP5.47□□□□□ -1.53
SCARNA15.2-201ENST00000516409 SAMD7Q7Z3H4 446 aa5.47□□□□□ -1.53
SCARNA15.2-201ENST00000516409 SCUBE2Q9NQ36 999 aa5.47□□□□□ -1.53
SCARNA15.2-201ENST00000516409 RABGEF1Q9UJ41 708 aa5.47□□□□□ -1.53
SCARNA15.2-201ENST00000516409 PIK3CDO00329 1044 aa5.46□□□□□ -1.54
SCARNA15.2-201ENST00000516409 ATP9BO43861 1147 aa5.46□□□□□ -1.54
SCARNA15.2-201ENST00000516409 ATP6V1AP38606 617 aa5.46□□□□□ -1.54
SCARNA15.2-201ENST00000516409 SLC4A3P48751 1232 aa5.46□□□□□ -1.54
SCARNA15.2-201ENST00000516409 CCDC27Q2M243 656 aa5.46□□□□□ -1.54
SCARNA15.2-201ENST00000516409 EIF4G2P78344 907 aaKnown RBP eCLIP5.45□□□□□ -1.54
SCARNA15.2-201ENST00000516409 FAM98CQ17RN3 349 aaKnown RBP5.45□□□□□ -1.54
SCARNA15.2-201ENST00000516409 PUS10Q3MIT2 529 aaKnown RBP5.45□□□□□ -1.54
SCARNA15.2-201ENST00000516409 DMRTA1Q5VZB9 504 aa5.45□□□□□ -1.54
SCARNA15.2-201ENST00000516409 SND1Q7KZF4 910 aaKnown RBP eCLIP5.45□□□□□ -1.54
SCARNA15.2-201ENST00000516409 RETREG3Q86VR2 466 aa5.45□□□□□ -1.54
SCARNA15.2-201ENST00000516409 PNMA1Q8ND90 353 aa5.45□□□□□ -1.54
SCARNA15.2-201ENST00000516409 FBXO45P0C2W1 286 aa5.44□□□□□ -1.54
SCARNA15.2-201ENST00000516409 NR1H3Q13133 447 aa5.44□□□□□ -1.54
SCARNA15.2-201ENST00000516409 POTEEQ6S8J3 1075 aa5.44□□□□□ -1.54
SCARNA15.2-201ENST00000516409 SP7Q8TDD2 431 aaPredicted RBP5.44□□□□□ -1.54
SCARNA15.2-201ENST00000516409 STK32AQ8WU08 396 aa5.44□□□□□ -1.54
SCARNA15.2-201ENST00000516409 ZMIZ1Q9ULJ6 1067 aa5.44□□□□□ -1.54
SCARNA15.2-201ENST00000516409 AXIN2Q9Y2T1 843 aa5.44□□□□□ -1.54
SCARNA15.2-201ENST00000516409 KMT5BQ4FZB7 885 aa5.43□□□□□ -1.54
SCARNA15.2-201ENST00000516409 MORN1Q5T089 497 aa5.43□□□□□ -1.54
SCARNA15.2-201ENST00000516409 KANK4Q5T7N3 995 aaPredicted RBP5.43□□□□□ -1.54
SCARNA15.2-201ENST00000516409 TMEM164Q5U3C3 297 aa5.43□□□□□ -1.54
SCARNA15.2-201ENST00000516409 RNF19BQ6ZMZ0 732 aa5.43□□□□□ -1.54
SCARNA15.2-201ENST00000516409 SLC27A5Q9Y2P5 690 aa5.43□□□□□ -1.54
SCARNA15.2-201ENST00000516409 USP17L3A6NCW0 530 aa5.42□□□□□ -1.54
SCARNA15.2-201ENST00000516409 USP17L4A6NCW7 530 aa5.42□□□□□ -1.54
SCARNA15.2-201ENST00000516409 E9PSI1 815 aa5.42□□□□□ -1.54
SCARNA15.2-201ENST00000516409 ARHGAP33O14559 1287 aa5.42□□□□□ -1.54
SCARNA15.2-201ENST00000516409 SKIP12755 728 aa5.42□□□□□ -1.54
SCARNA15.2-201ENST00000516409 USP17L2Q6R6M4 530 aa5.42□□□□□ -1.54
SCARNA15.2-201ENST00000516409 LYPD8Q6UX82 237 aa5.42□□□□□ -1.54
SCARNA15.2-201ENST00000516409 USP17L1Q7RTZ2 530 aa5.42□□□□□ -1.54
SCARNA15.2-201ENST00000516409 NOVA2Q9UNW9 492 aaKnown RBP5.42□□□□□ -1.54
SCARNA15.2-201ENST00000516409 ZBBXA8MT70 800 aa5.41□□□□□ -1.54
SCARNA15.2-201ENST00000516409 SNPHO15079 494 aa5.41□□□□□ -1.54
SCARNA15.2-201ENST00000516409 DESI1Q6ICB0 168 aa5.41□□□□□ -1.54
SCARNA15.2-201ENST00000516409 BLOC1S3Q6QNY0 202 aa5.41□□□□□ -1.54
SCARNA15.2-201ENST00000516409 POTEHQ6S545 545 aa5.41□□□□□ -1.54
SCARNA15.2-201ENST00000516409 MAMSTRQ6ZN01 415 aa5.41□□□□□ -1.54
SCARNA15.2-201ENST00000516409 DEPDC4Q8N2C3 294 aa5.41□□□□□ -1.54
SCARNA15.2-201ENST00000516409 FAM174AQ8TBP5 190 aa5.41□□□□□ -1.54
SCARNA15.2-201ENST00000516409 SLC4A5Q9BY07 1137 aa5.41□□□□□ -1.54
SCARNA15.2-201ENST00000516409 MAP10Q9P2G4 905 aa5.41□□□□□ -1.54
SCARNA15.2-201ENST00000516409 FKBPLQ9UIM3 349 aa5.41□□□□□ -1.54
SCARNA15.2-201ENST00000516409 GNEQ9Y223 722 aaKnown RBP5.41□□□□□ -1.54
SCARNA15.2-201ENST00000516409 VPS9D1Q9Y2B5 631 aa5.41□□□□□ -1.54
SCARNA15.2-201ENST00000516409 USP17L5A8MUK1 530 aa5.4□□□□□ -1.54
SCARNA15.2-201ENST00000516409 ACTN4O43707 911 aaKnown RBP5.4□□□□□ -1.54
SCARNA15.2-201ENST00000516409 ELOAQ14241 798 aaKnown RBP5.4□□□□□ -1.54
SCARNA15.2-201ENST00000516409 Q3C1V9 767 aa5.4□□□□□ -1.54
SCARNA15.2-201ENST00000516409 VARS2Q5ST30 1063 aaKnown RBP5.4□□□□□ -1.54
SCARNA15.2-201ENST00000516409 B4GALNT3Q6L9W6 998 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms