RNA–Protein interactions for RNA: ENST00000515974.1

RNU6-1170P-201, Transcript of RNA, U6 small nuclear 1170, pseudogene, humanhuman

BASIC

Gene RNU6-1170P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1170P-201ENST00000515974 HLA-CQ95604 372 aa7.89□□□□□ -1.15
RNU6-1170P-201ENST00000515974 DACH1Q9UI36 760 aa7.89□□□□□ -1.15
RNU6-1170P-201ENST00000515974 KDM4AO75164 1064 aa7.88□□□□□ -1.15
RNU6-1170P-201ENST00000515974 DXOO77932 396 aaKnown RBP7.88□□□□□ -1.15
RNU6-1170P-201ENST00000515974 MDM2Q00987 491 aaPredicted RBP7.88□□□□□ -1.15
RNU6-1170P-201ENST00000515974 Q3C1V9 767 aa7.88□□□□□ -1.15
RNU6-1170P-201ENST00000515974 LCE2AQ5TA79 106 aaPredicted RBP7.88□□□□□ -1.15
RNU6-1170P-201ENST00000515974 WNT7AO00755 349 aa7.86□□□□□ -1.15
RNU6-1170P-201ENST00000515974 VSIG10Q8N0Z9 540 aa7.86□□□□□ -1.15
RNU6-1170P-201ENST00000515974 CCDC102AQ96A19 550 aa7.86□□□□□ -1.15
RNU6-1170P-201ENST00000515974 USB1Q9BQ65 265 aaKnown RBP7.86□□□□□ -1.15
RNU6-1170P-201ENST00000515974 HOXA2O43364 376 aa7.85□□□□□ -1.15
RNU6-1170P-201ENST00000515974 SMCPP49901 116 aaPredicted RBP7.85□□□□□ -1.15
RNU6-1170P-201ENST00000515974 USP46P62068 366 aa7.85□□□□□ -1.15
RNU6-1170P-201ENST00000515974 CYP4X1Q8N118 509 aa7.85□□□□□ -1.15
RNU6-1170P-201ENST00000515974 SMPD1P17405 629 aa7.84□□□□□ -1.15
RNU6-1170P-201ENST00000515974 TRIM32Q13049 653 aa7.84□□□□□ -1.15
RNU6-1170P-201ENST00000515974 FAM217BQ9NTX9 383 aaPredicted RBP7.84□□□□□ -1.15
RNU6-1170P-201ENST00000515974 GUCA2AQ02747 115 aa7.82□□□□□ -1.16
RNU6-1170P-201ENST00000515974 CTC1Q2NKJ3 1217 aa7.82□□□□□ -1.16
RNU6-1170P-201ENST00000515974 MRGPRX2Q96LB1 330 aa7.82□□□□□ -1.16
RNU6-1170P-201ENST00000515974 REPIN1Q9BWE0 567 aaKnown RBP7.82□□□□□ -1.16
RNU6-1170P-201ENST00000515974 ZBTB24O43167 697 aaPredicted RBP7.81□□□□□ -1.16
RNU6-1170P-201ENST00000515974 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.81□□□□□ -1.16
RNU6-1170P-201ENST00000515974 SNIP1Q8TAD8 396 aaKnown RBP7.81□□□□□ -1.16
RNU6-1170P-201ENST00000515974 GPCPD1Q9NPB8 672 aa7.81□□□□□ -1.16
RNU6-1170P-201ENST00000515974 AXIN1O15169 862 aa7.8□□□□□ -1.16
RNU6-1170P-201ENST00000515974 SKOR1P84550 965 aa7.8□□□□□ -1.16
RNU6-1170P-201ENST00000515974 TREML4Q6UXN2 200 aa7.8□□□□□ -1.16
RNU6-1170P-201ENST00000515974 GMPR2Q9P2T1 348 aaKnown RBP7.8□□□□□ -1.16
RNU6-1170P-201ENST00000515974 J3QL48 77 aa7.79□□□□□ -1.16
RNU6-1170P-201ENST00000515974 CLCN1P35523 988 aa7.79□□□□□ -1.16
RNU6-1170P-201ENST00000515974 SYMPKQ92797 1274 aaKnown RBP7.79□□□□□ -1.16
RNU6-1170P-201ENST00000515974 TTC24A2A3L6 582 aaPredicted RBP7.78□□□□□ -1.16
RNU6-1170P-201ENST00000515974 TULP1O00294 542 aaPredicted RBP7.78□□□□□ -1.16
RNU6-1170P-201ENST00000515974 PCDHGC3Q9UN70 934 aa7.78□□□□□ -1.16
RNU6-1170P-201ENST00000515974 JUNDP17535 347 aa7.77□□□□□ -1.17
RNU6-1170P-201ENST00000515974 WNT7BP56706 349 aa7.76□□□□□ -1.17
RNU6-1170P-201ENST00000515974 RC3H1Q5TC82 1133 aaKnown RBP7.76□□□□□ -1.17
RNU6-1170P-201ENST00000515974 PTCRAQ6ISU1 281 aaPredicted RBP7.76□□□□□ -1.17
RNU6-1170P-201ENST00000515974 RETREG3Q86VR2 466 aa7.75□□□□□ -1.17
RNU6-1170P-201ENST00000515974 HPS1Q92902 700 aa7.75□□□□□ -1.17
RNU6-1170P-201ENST00000515974 C11orf95C9JLR9 678 aaPredicted RBP7.74□□□□□ -1.17
RNU6-1170P-201ENST00000515974 CCDC24Q8N4L8 307 aa7.74□□□□□ -1.17
RNU6-1170P-201ENST00000515974 ATP13A2Q9NQ11 1180 aa7.74□□□□□ -1.17
RNU6-1170P-201ENST00000515974 SIAH2O43255 324 aa7.73□□□□□ -1.17
RNU6-1170P-201ENST00000515974 NFX1Q12986 1120 aaKnown RBP7.73□□□□□ -1.17
RNU6-1170P-201ENST00000515974 LCE2CQ5TA81 110 aa7.73□□□□□ -1.17
RNU6-1170P-201ENST00000515974 BARGINQ6ZT62 677 aa7.73□□□□□ -1.17
RNU6-1170P-201ENST00000515974 ZMYND10O75800 440 aa7.72□□□□□ -1.17
RNU6-1170P-201ENST00000515974 FDX1P10109 184 aa7.72□□□□□ -1.17
RNU6-1170P-201ENST00000515974 SNRPBP14678 240 aaKnown RBP7.72□□□□□ -1.17
RNU6-1170P-201ENST00000515974 SSTR3P32745 418 aaPredicted RBP7.72□□□□□ -1.17
RNU6-1170P-201ENST00000515974 NUTM1Q86Y26 1132 aa7.72□□□□□ -1.17
RNU6-1170P-201ENST00000515974 SPIRE2Q8WWL2 714 aa7.72□□□□□ -1.17
RNU6-1170P-201ENST00000515974 AMHR2Q16671 573 aa7.71□□□□□ -1.18
RNU6-1170P-201ENST00000515974 NUDT12Q9BQG2 462 aa7.71□□□□□ -1.18
RNU6-1170P-201ENST00000515974 TRIM47Q96LD4 638 aa7.7□□□□□ -1.18
RNU6-1170P-201ENST00000515974 MOXD2PA6NHM9 499 aa7.69□□□□□ -1.18
RNU6-1170P-201ENST00000515974 WFS1O76024 890 aa7.69□□□□□ -1.18
RNU6-1170P-201ENST00000515974 NDUFV2P19404 249 aa7.69□□□□□ -1.18
RNU6-1170P-201ENST00000515974 ZC3H15Q8WU90 426 aaKnown RBP7.68□□□□□ -1.18
RNU6-1170P-201ENST00000515974 C6orf229H3BNL8 230 aa7.67□□□□□ -1.18
RNU6-1170P-201ENST00000515974 CCNYL3P0C7X3 344 aa7.67□□□□□ -1.18
RNU6-1170P-201ENST00000515974 MS4A1P11836 297 aa7.67□□□□□ -1.18
RNU6-1170P-201ENST00000515974 SH3BP2P78314 561 aa7.67□□□□□ -1.18
RNU6-1170P-201ENST00000515974 PTPRNQ16849 979 aa7.67□□□□□ -1.18
RNU6-1170P-201ENST00000515974 KRI1Q8N9T8 703 aaKnown RBP7.67□□□□□ -1.18
RNU6-1170P-201ENST00000515974 EVA1BQ9NVM1 165 aa7.67□□□□□ -1.18
RNU6-1170P-201ENST00000515974 WIPF1O43516 503 aa7.66□□□□□ -1.18
RNU6-1170P-201ENST00000515974 ALDH1A1P00352 501 aa7.66□□□□□ -1.18
RNU6-1170P-201ENST00000515974 GIGYF2Q6Y7W6 1299 aaKnown RBP7.66□□□□□ -1.18
RNU6-1170P-201ENST00000515974 GJA5P36382 358 aa7.65□□□□□ -1.18
RNU6-1170P-201ENST00000515974 DESI1Q6ICB0 168 aa7.65□□□□□ -1.18
RNU6-1170P-201ENST00000515974 SENP2Q9HC62 589 aa7.65□□□□□ -1.18
RNU6-1170P-201ENST00000515974 EHBP1Q8NDI1 1231 aa7.64□□□□□ -1.19
RNU6-1170P-201ENST00000515974 PRR7Q8TB68 274 aa7.64□□□□□ -1.19
RNU6-1170P-201ENST00000515974 UNC93B1Q9H1C4 597 aa7.64□□□□□ -1.19
RNU6-1170P-201ENST00000515974 TERTO14746 1132 aaKnown RBP7.63□□□□□ -1.19
RNU6-1170P-201ENST00000515974 KCNH2Q12809 1159 aa7.63□□□□□ -1.19
RNU6-1170P-201ENST00000515974 TTLL12Q14166 644 aaPredicted RBP7.63□□□□□ -1.19
RNU6-1170P-201ENST00000515974 TRIM46Q7Z4K8 759 aa7.63□□□□□ -1.19
RNU6-1170P-201ENST00000515974 BEGAINQ9BUH8 593 aa7.63□□□□□ -1.19
RNU6-1170P-201ENST00000515974 MTMR2Q13614 643 aa7.62□□□□□ -1.19
RNU6-1170P-201ENST00000515974 PARP9Q8IXQ6 854 aa7.62□□□□□ -1.19
RNU6-1170P-201ENST00000515974 BAP1Q92560 729 aa7.62□□□□□ -1.19
RNU6-1170P-201ENST00000515974 KIFC2Q96AC6 838 aa7.62□□□□□ -1.19
RNU6-1170P-201ENST00000515974 TBC1D2Q9BYX2 928 aa7.62□□□□□ -1.19
RNU6-1170P-201ENST00000515974 PCDHB15Q9Y5E8 787 aa7.62□□□□□ -1.19
RNU6-1170P-201ENST00000515974 SPDYE5A6NIY4 337 aa7.61□□□□□ -1.19
RNU6-1170P-201ENST00000515974 RSBN1LQ6PCB5 846 aaPredicted RBP7.61□□□□□ -1.19
RNU6-1170P-201ENST00000515974 CFAP99D6REC4 459 aa7.6□□□□□ -1.19
RNU6-1170P-201ENST00000515974 TRIM66O15016 1216 aa7.6□□□□□ -1.19
RNU6-1170P-201ENST00000515974 SPTLC1O15269 473 aa7.6□□□□□ -1.19
RNU6-1170P-201ENST00000515974 BMP1P13497 986 aa7.6□□□□□ -1.19
RNU6-1170P-201ENST00000515974 LYPD8Q6UX82 237 aa7.6□□□□□ -1.19
RNU6-1170P-201ENST00000515974 MPNDQ8N594 471 aa7.6□□□□□ -1.19
RNU6-1170P-201ENST00000515974 ZNF511Q8NB15 262 aa7.6□□□□□ -1.19
RNU6-1170P-201ENST00000515974 CAPN5O15484 640 aaPredicted RBP7.59□□□□□ -1.19
RNU6-1170P-201ENST00000515974 LINC01559Q495D7 138 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms