RNA–Protein interactions for RNA: ENST00000515752.5

SDHA-218, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-218ENST00000515752 USP32Q8NFA0 1604 aa20.34■□□□□ 0.85
SDHA-218ENST00000515752 DLC1Q96QB1 1528 aa20.33■□□□□ 0.85
SDHA-218ENST00000515752 RNF123Q5XPI4 1314 aa20.33■□□□□ 0.84
SDHA-218ENST00000515752 PRAM1Q96QH2 718 aa20.32■□□□□ 0.84
SDHA-218ENST00000515752 ADAMTS8Q9UP79 889 aa20.32■□□□□ 0.84
SDHA-218ENST00000515752 ABCC11Q96J66 1382 aa20.3■□□□□ 0.84
SDHA-218ENST00000515752 MORC1Q86VD1 984 aa20.3■□□□□ 0.84
SDHA-218ENST00000515752 NGEFQ8N5V2 710 aa20.3■□□□□ 0.84
SDHA-218ENST00000515752 PPP4R2Q9NY27 417 aa20.3■□□□□ 0.84
SDHA-218ENST00000515752 POLR3AO14802 1390 aaPredicted RBP20.3■□□□□ 0.84
SDHA-218ENST00000515752 SRPK2P78362 688 aaKnown RBP20.3■□□□□ 0.84
SDHA-218ENST00000515752 CABP2Q9NPB3 220 aa20.28■□□□□ 0.84
SDHA-218ENST00000515752 TERF2IPQ9NYB0 399 aa20.28■□□□□ 0.84
SDHA-218ENST00000515752 SIRT1Q96EB6 747 aa20.27■□□□□ 0.84
SDHA-218ENST00000515752 NLRP1Q9C000 1473 aa20.27■□□□□ 0.84
SDHA-218ENST00000515752 SAFB2Q14151 953 aaKnown RBP eCLIP20.27■□□□□ 0.843e-7■□□□□ 9.3
SDHA-218ENST00000515752 TMEM2Q9UHN6 1383 aa20.25■□□□□ 0.83
SDHA-218ENST00000515752 MINK1Q8N4C8 1332 aaPredicted RBP20.24■□□□□ 0.83
SDHA-218ENST00000515752 IRX6P78412 446 aaPredicted RBP20.24■□□□□ 0.83
SDHA-218ENST00000515752 SETD1AO15047 1707 aaKnown RBP20.22■□□□□ 0.83
SDHA-218ENST00000515752 CFAP53Q96M91 514 aa20.22■□□□□ 0.83
SDHA-218ENST00000515752 CDK19Q9BWU1 502 aa20.22■□□□□ 0.83
SDHA-218ENST00000515752 HDGFL2Q7Z4V5 671 aaPredicted RBP20.21■□□□□ 0.83
SDHA-218ENST00000515752 RCAN3Q9UKA8 241 aa20.21■□□□□ 0.83
SDHA-218ENST00000515752 SALL2Q9Y467 1007 aaPredicted RBP20.21■□□□□ 0.83
SDHA-218ENST00000515752 FAM135BQ49AJ0 1406 aa20.21■□□□□ 0.83
SDHA-218ENST00000515752 A0A1W2PP64 1363 aa20.2■□□□□ 0.82
SDHA-218ENST00000515752 TECPR2O15040 1411 aa20.2■□□□□ 0.82
SDHA-218ENST00000515752 TRHP20396 242 aaPredicted RBP20.19■□□□□ 0.82
SDHA-218ENST00000515752 SENP3Q9H4L4 574 aaPredicted RBP20.19■□□□□ 0.82
SDHA-218ENST00000515752 NRXN3Q9Y4C0 1643 aa20.19■□□□□ 0.82
SDHA-218ENST00000515752 MED14O60244 1454 aa20.19■□□□□ 0.82
SDHA-218ENST00000515752 UBR1Q8IWV7 1749 aa20.19■□□□□ 0.82
SDHA-218ENST00000515752 SENP3-EIF4A1A0A087X0R7 540 aa20.18■□□□□ 0.82
SDHA-218ENST00000515752 ZNF521Q96K83 1311 aa20.17■□□□□ 0.82
SDHA-218ENST00000515752 GOLGA2Q08379 1002 aa20.16■□□□□ 0.82
SDHA-218ENST00000515752 METP08581 1390 aa20.16■□□□□ 0.82
SDHA-218ENST00000515752 PLEKHG1Q9ULL1 1385 aa20.16■□□□□ 0.82
SDHA-218ENST00000515752 EID1Q9Y6B2 187 aa20.16■□□□□ 0.82
SDHA-218ENST00000515752 ATP7BP35670 1465 aa20.15■□□□□ 0.82
SDHA-218ENST00000515752 KNDC1Q76NI1 1749 aa20.14■□□□□ 0.82
SDHA-218ENST00000515752 RRP1P56182 461 aaKnown RBP20.14■□□□□ 0.81
SDHA-218ENST00000515752 WAPLQ7Z5K2 1190 aa20.14■□□□□ 0.81
SDHA-218ENST00000515752 CDCA7LQ96GN5 454 aa20.14■□□□□ 0.81
SDHA-218ENST00000515752 MTHFSP49914 203 aa20.13■□□□□ 0.81
SDHA-218ENST00000515752 CD163L1Q9NR16 1453 aa20.13■□□□□ 0.81
SDHA-218ENST00000515752 PLEKHH1Q9ULM0 1364 aa20.13■□□□□ 0.81
SDHA-218ENST00000515752 WASLO00401 505 aaPredicted RBP20.13■□□□□ 0.81
SDHA-218ENST00000515752 CABP1Q9NZU7 370 aa20.13■□□□□ 0.81
SDHA-218ENST00000515752 NCBP3Q53F19 620 aaKnown RBP20.12■□□□□ 0.81
SDHA-218ENST00000515752 CPS1P31327 1500 aa20.12■□□□□ 0.81
SDHA-218ENST00000515752 TNNT2P45379 298 aaPredicted RBP20.11■□□□□ 0.81
SDHA-218ENST00000515752 APAF1O14727 1248 aa20.11■□□□□ 0.81
SDHA-218ENST00000515752 THEMISQ8N1K5 641 aaPredicted RBP20.11■□□□□ 0.81
SDHA-218ENST00000515752 FYB1O15117 783 aa20.1■□□□□ 0.81
SDHA-218ENST00000515752 TXNDC2Q86VQ3 553 aa20.1■□□□□ 0.81
SDHA-218ENST00000515752 SLIT1O75093 1534 aa20.1■□□□□ 0.81
SDHA-218ENST00000515752 ADAMTS13Q76LX8 1427 aa20.1■□□□□ 0.81
SDHA-218ENST00000515752 RUNDC1Q96C34 613 aa20.09■□□□□ 0.81
SDHA-218ENST00000515752 TSHZ2Q9NRE2 1034 aa20.09■□□□□ 0.81
SDHA-218ENST00000515752 C3P01024 1663 aa20.09■□□□□ 0.81
SDHA-218ENST00000515752 ARHGAP23Q9P227 1491 aa20.09■□□□□ 0.81
SDHA-218ENST00000515752 CEBPAP49715 358 aaPredicted RBP20.09■□□□□ 0.81
SDHA-218ENST00000515752 CCDC146Q8IYE0 955 aa20.09■□□□□ 0.81
SDHA-218ENST00000515752 SLFN5Q08AF3 891 aa20.08■□□□□ 0.8
SDHA-218ENST00000515752 DUSP27Q5VZP5 1158 aa20.08■□□□□ 0.8
SDHA-218ENST00000515752 FER1L4A9Z1Z3 1794 aa20.08■□□□□ 0.8
SDHA-218ENST00000515752 E9PSI1 815 aa20.07■□□□□ 0.8
SDHA-218ENST00000515752 LTKP29376 864 aa20.06■□□□□ 0.8
SDHA-218ENST00000515752 TRMT2AQ8IZ69 625 aaKnown RBP20.06■□□□□ 0.8
SDHA-218ENST00000515752 GGNBP2Q9H3C7 697 aa20.06■□□□□ 0.8
SDHA-218ENST00000515752 CCDC61Q9Y6R9 512 aa20.06■□□□□ 0.8
SDHA-218ENST00000515752 ANKRD26Q9UPS8 1709 aa20.06■□□□□ 0.8
SDHA-218ENST00000515752 SHPRHQ149N8 1683 aa20.05■□□□□ 0.8
SDHA-218ENST00000515752 TBX22Q9Y458 520 aa20.05■□□□□ 0.8
SDHA-218ENST00000515752 CPSF1Q10570 1443 aaKnown RBP20.04■□□□□ 0.8
SDHA-218ENST00000515752 B4GALNT3Q6L9W6 998 aa20.04■□□□□ 0.8
SDHA-218ENST00000515752 CCDC136Q96JN2 1154 aa20.04■□□□□ 0.8
SDHA-218ENST00000515752 ZNF692Q9BU19 519 aaPredicted RBP20.04■□□□□ 0.8
SDHA-218ENST00000515752 EDC4Q6P2E9 1401 aaKnown RBP20.03■□□□□ 0.8
SDHA-218ENST00000515752 NUDT16Q96DE0 195 aaKnown RBP20.03■□□□□ 0.8
SDHA-218ENST00000515752 PPIP5K1Q6PFW1 1433 aa20.03■□□□□ 0.8
SDHA-218ENST00000515752 CCDC27Q2M243 656 aa20.02■□□□□ 0.8
SDHA-218ENST00000515752 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.02■□□□□ 0.79
SDHA-218ENST00000515752 PNNQ9H307 717 aaKnown RBP20.02■□□□□ 0.79
SDHA-218ENST00000515752 DIP2AQ14689 1571 aa20.01■□□□□ 0.79
SDHA-218ENST00000515752 ROBO2Q9HCK4 1378 aa20■□□□□ 0.79
SDHA-218ENST00000515752 ADGRB2O60241 1585 aa20■□□□□ 0.79
SDHA-218ENST00000515752 WWC1Q8IX03 1113 aa20■□□□□ 0.79
SDHA-218ENST00000515752 NKTRP30414 1462 aaKnown RBP20■□□□□ 0.79
SDHA-218ENST00000515752 U2AF1L5P0DN76 240 aaPredicted RBP19.99■□□□□ 0.79
SDHA-218ENST00000515752 U2AF1Q01081 240 aaKnown RBP eCLIP19.99■□□□□ 0.79
SDHA-218ENST00000515752 WDR63Q8IWG1 891 aa19.99■□□□□ 0.79
SDHA-218ENST00000515752 PNPLA6Q8IY17 1366 aa19.99■□□□□ 0.79
SDHA-218ENST00000515752 TCP11L2Q8N4U5 519 aa19.99■□□□□ 0.79
SDHA-218ENST00000515752 KIF20BQ96Q89 1820 aa19.98■□□□□ 0.79
SDHA-218ENST00000515752 PHF23Q9BUL5 403 aaPredicted RBP19.98■□□□□ 0.79
SDHA-218ENST00000515752 IQSEC2Q5JU85 1478 aa19.98■□□□□ 0.79
SDHA-218ENST00000515752 CDC42BPGQ6DT37 1551 aa19.98■□□□□ 0.79
SDHA-218ENST00000515752 PTCH1Q13635 1447 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms