RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 HOXA2O43364 376 aa10.43□□□□□ -0.74
LINC01088-211ENST00000515597 CLCN1P35523 988 aa10.43□□□□□ -0.74
LINC01088-211ENST00000515597 GUCA2AQ02747 115 aa10.43□□□□□ -0.74
LINC01088-211ENST00000515597 ZNF787Q6DD87 383 aa10.42□□□□□ -0.74
LINC01088-211ENST00000515597 USP46P62068 366 aa10.41□□□□□ -0.74
LINC01088-211ENST00000515597 USB1Q9BQ65 265 aaKnown RBP10.41□□□□□ -0.74
LINC01088-211ENST00000515597 REPIN1Q9BWE0 567 aaKnown RBP10.41□□□□□ -0.74
LINC01088-211ENST00000515597 CD2BP2O95400 341 aaKnown RBP10.4□□□□□ -0.74
LINC01088-211ENST00000515597 KRI1Q8N9T8 703 aaKnown RBP10.4□□□□□ -0.74
LINC01088-211ENST00000515597 ZBTB24O43167 697 aaPredicted RBP10.39□□□□□ -0.75
LINC01088-211ENST00000515597 MMP16P51512 607 aa10.39□□□□□ -0.75
LINC01088-211ENST00000515597 ST8SIA5O15466 376 aa10.38□□□□□ -0.75
LINC01088-211ENST00000515597 DXOO77932 396 aaKnown RBP10.37□□□□□ -0.75
LINC01088-211ENST00000515597 NUTM1Q86Y26 1132 aa10.37□□□□□ -0.75
LINC01088-211ENST00000515597 SYMPKQ92797 1274 aaKnown RBP10.37□□□□□ -0.75
LINC01088-211ENST00000515597 BARGINQ6ZT62 677 aa10.36□□□□□ -0.75
LINC01088-211ENST00000515597 POTECB2RU33 542 aa10.35□□□□□ -0.75
LINC01088-211ENST00000515597 ZMYND10O75800 440 aa10.35□□□□□ -0.75
LINC01088-211ENST00000515597 TRIM32Q13049 653 aa10.35□□□□□ -0.75
LINC01088-211ENST00000515597 CYP4X1Q8N118 509 aa10.35□□□□□ -0.75
LINC01088-211ENST00000515597 ZC3H15Q8WU90 426 aaKnown RBP10.35□□□□□ -0.75
LINC01088-211ENST00000515597 TOR4AQ9NXH8 423 aa10.35□□□□□ -0.75
LINC01088-211ENST00000515597 TTLL12Q14166 644 aaPredicted RBP10.34□□□□□ -0.75
LINC01088-211ENST00000515597 CCDC24Q8N4L8 307 aa10.34□□□□□ -0.75
LINC01088-211ENST00000515597 SSTR3P32745 418 aaPredicted RBP10.33□□□□□ -0.76
LINC01088-211ENST00000515597 AAASQ9NRG9 546 aa10.33□□□□□ -0.76
LINC01088-211ENST00000515597 PCDHGC3Q9UN70 934 aa10.31□□□□□ -0.76
LINC01088-211ENST00000515597 WNT7AO00755 349 aa10.3□□□□□ -0.76
LINC01088-211ENST00000515597 FDX1P10109 184 aa10.3□□□□□ -0.76
LINC01088-211ENST00000515597 JUNDP17535 347 aa10.3□□□□□ -0.76
LINC01088-211ENST00000515597 AMHR2Q16671 573 aa10.3□□□□□ -0.76
LINC01088-211ENST00000515597 GIGYF2Q6Y7W6 1299 aaKnown RBP10.3□□□□□ -0.76
LINC01088-211ENST00000515597 ZNF775Q96BV0 537 aaPredicted RBP10.3□□□□□ -0.76
LINC01088-211ENST00000515597 TTC24A2A3L6 582 aaPredicted RBP10.29□□□□□ -0.76
LINC01088-211ENST00000515597 SPIRE2Q8WWL2 714 aa10.29□□□□□ -0.76
LINC01088-211ENST00000515597 NDUFV2P19404 249 aa10.28□□□□□ -0.76
LINC01088-211ENST00000515597 RETREG3Q86VR2 466 aa10.28□□□□□ -0.76
LINC01088-211ENST00000515597 MRGPRX2Q96LB1 330 aa10.28□□□□□ -0.76
LINC01088-211ENST00000515597 DACH1Q9UI36 760 aa10.28□□□□□ -0.76
LINC01088-211ENST00000515597 MOXD2PA6NHM9 499 aa10.27□□□□□ -0.77
LINC01088-211ENST00000515597 C6orf229H3BNL8 230 aa10.27□□□□□ -0.77
LINC01088-211ENST00000515597 AVPP01185 164 aa10.27□□□□□ -0.77
LINC01088-211ENST00000515597 SKOR1P84550 965 aa10.26□□□□□ -0.77
LINC01088-211ENST00000515597 CRIPAKQ8N1N5 446 aa10.26□□□□□ -0.77
LINC01088-211ENST00000515597 SMPD1P17405 629 aa10.25□□□□□ -0.77
LINC01088-211ENST00000515597 SNIP1Q8TAD8 396 aaKnown RBP10.25□□□□□ -0.77
LINC01088-211ENST00000515597 NUDT12Q9BQG2 462 aa10.25□□□□□ -0.77
LINC01088-211ENST00000515597 AXIN1O15169 862 aa10.24□□□□□ -0.77
LINC01088-211ENST00000515597 PARP9Q8IXQ6 854 aa10.24□□□□□ -0.77
LINC01088-211ENST00000515597 J3QL48 77 aa10.23□□□□□ -0.77
LINC01088-211ENST00000515597 PTCRAQ6ISU1 281 aaPredicted RBP10.23□□□□□ -0.77
LINC01088-211ENST00000515597 BEGAINQ9BUH8 593 aa10.23□□□□□ -0.77
LINC01088-211ENST00000515597 RC3H1Q5TC82 1133 aaKnown RBP10.22□□□□□ -0.77
LINC01088-211ENST00000515597 TRIM66O15016 1216 aa10.21□□□□□ -0.77
LINC01088-211ENST00000515597 MS4A1P11836 297 aa10.21□□□□□ -0.77
LINC01088-211ENST00000515597 WNT7BP56706 349 aa10.21□□□□□ -0.77
LINC01088-211ENST00000515597 CTC1Q2NKJ3 1217 aa10.2□□□□□ -0.78
LINC01088-211ENST00000515597 GMPR2Q9P2T1 348 aaKnown RBP10.2□□□□□ -0.78
LINC01088-211ENST00000515597 CCNYL3P0C7X3 344 aa10.19□□□□□ -0.78
LINC01088-211ENST00000515597 PRR7Q8TB68 274 aa10.19□□□□□ -0.78
LINC01088-211ENST00000515597 TBC1D2Q9BYX2 928 aa10.19□□□□□ -0.78
LINC01088-211ENST00000515597 SMCPP49901 116 aaPredicted RBP10.18□□□□□ -0.78
LINC01088-211ENST00000515597 HPS1Q92902 700 aa10.18□□□□□ -0.78
LINC01088-211ENST00000515597 MTMR2Q13614 643 aa10.17□□□□□ -0.78
LINC01088-211ENST00000515597 PTPRNQ16849 979 aa10.17□□□□□ -0.78
LINC01088-211ENST00000515597 AK7Q96M32 723 aa10.17□□□□□ -0.78
LINC01088-211ENST00000515597 RSBN1LQ6PCB5 846 aaPredicted RBP10.16□□□□□ -0.78
LINC01088-211ENST00000515597 ALDH1A1P00352 501 aa10.15□□□□□ -0.78
LINC01088-211ENST00000515597 LINC01559Q495D7 138 aa10.15□□□□□ -0.78
LINC01088-211ENST00000515597 EHBP1Q8NDI1 1231 aa10.15□□□□□ -0.78
LINC01088-211ENST00000515597 C11orf95C9JLR9 678 aaPredicted RBP10.14□□□□□ -0.79
LINC01088-211ENST00000515597 UNC93B1Q9H1C4 597 aa10.14□□□□□ -0.79
LINC01088-211ENST00000515597 PCDHB15Q9Y5E8 787 aa10.14□□□□□ -0.79
LINC01088-211ENST00000515597 SH3BP2P78314 561 aa10.13□□□□□ -0.79
LINC01088-211ENST00000515597 ATP13A2Q9NQ11 1180 aa10.13□□□□□ -0.79
LINC01088-211ENST00000515597 SPDYE5A6NIY4 337 aa10.12□□□□□ -0.79
LINC01088-211ENST00000515597 EVA1BQ9NVM1 165 aa10.12□□□□□ -0.79
LINC01088-211ENST00000515597 CFAP99D6REC4 459 aa10.11□□□□□ -0.79
LINC01088-211ENST00000515597 PDE4DQ08499 809 aa10.11□□□□□ -0.79
LINC01088-211ENST00000515597 KCNH2Q12809 1159 aa10.11□□□□□ -0.79
LINC01088-211ENST00000515597 BAP1Q92560 729 aa10.11□□□□□ -0.79
LINC01088-211ENST00000515597 SPTLC1O15269 473 aa10.1□□□□□ -0.79
LINC01088-211ENST00000515597 SIAH2O43255 324 aa10.1□□□□□ -0.79
LINC01088-211ENST00000515597 GJA5P36382 358 aa10.1□□□□□ -0.79
LINC01088-211ENST00000515597 DIXDC1Q155Q3 683 aa10.1□□□□□ -0.79
LINC01088-211ENST00000515597 CSPP1Q1MSJ5 1256 aa10.1□□□□□ -0.79
LINC01088-211ENST00000515597 DESI1Q6ICB0 168 aa10.1□□□□□ -0.79
LINC01088-211ENST00000515597 CABLES1Q8TDN4 633 aa10.1□□□□□ -0.79
LINC01088-211ENST00000515597 SLC24A3Q9HC58 644 aa10.1□□□□□ -0.79
LINC01088-211ENST00000515597 SLC24A1O60721 1099 aa10.09□□□□□ -0.79
LINC01088-211ENST00000515597 HRCP23327 699 aa10.09□□□□□ -0.79
LINC01088-211ENST00000515597 RIC3Q7Z5B4 369 aa10.09□□□□□ -0.79
LINC01088-211ENST00000515597 SNRPBP14678 240 aaKnown RBP10.08□□□□□ -0.8
LINC01088-211ENST00000515597 CTHP32929 405 aa10.08□□□□□ -0.8
LINC01088-211ENST00000515597 ZBTB3Q9H5J0 574 aa10.08□□□□□ -0.8
LINC01088-211ENST00000515597 TLL2Q9Y6L7 1015 aa10.08□□□□□ -0.8
LINC01088-211ENST00000515597 TREML4Q6UXN2 200 aa10.07□□□□□ -0.8
LINC01088-211ENST00000515597 ZNF511Q8NB15 262 aa10.07□□□□□ -0.8
LINC01088-211ENST00000515597 LIMD1Q9UGP4 676 aa10.07□□□□□ -0.8
LINC01088-211ENST00000515597 WASF2Q9Y6W5 498 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms