RNA–Protein interactions for RNA: ENST00000515509.1

CXXC4-203, Transcript of CXXC finger protein 4, humanhuman

TSL 2

Gene CXXC4, Length 363 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-203ENST00000515509 AXIN1O15169 862 aa8.56□□□□□ -1.04
CXXC4-203ENST00000515509 CD46P15529 392 aa8.56□□□□□ -1.04
CXXC4-203ENST00000515509 DACH1Q9UI36 760 aa8.56□□□□□ -1.04
CXXC4-203ENST00000515509 MAP2K5Q13163 448 aa8.55□□□□□ -1.04
CXXC4-203ENST00000515509 CTC1Q2NKJ3 1217 aa8.55□□□□□ -1.04
CXXC4-203ENST00000515509 TTC24A2A3L6 582 aaPredicted RBP8.54□□□□□ -1.04
CXXC4-203ENST00000515509 MMP16P51512 607 aa8.54□□□□□ -1.04
CXXC4-203ENST00000515509 WNT7AO00755 349 aa8.53□□□□□ -1.04
CXXC4-203ENST00000515509 KDM4AO75164 1064 aa8.53□□□□□ -1.04
CXXC4-203ENST00000515509 TRIM32Q13049 653 aa8.53□□□□□ -1.04
CXXC4-203ENST00000515509 TREML4Q6UXN2 200 aa8.53□□□□□ -1.04
CXXC4-203ENST00000515509 GMPR2Q9P2T1 348 aaKnown RBP8.53□□□□□ -1.04
CXXC4-203ENST00000515509 SMCPP49901 116 aaPredicted RBP8.52□□□□□ -1.05
CXXC4-203ENST00000515509 USB1Q9BQ65 265 aaKnown RBP8.52□□□□□ -1.05
CXXC4-203ENST00000515509 SLC24A1O60721 1099 aa8.51□□□□□ -1.05
CXXC4-203ENST00000515509 MDM2Q00987 491 aaPredicted RBP8.51□□□□□ -1.05
CXXC4-203ENST00000515509 C11orf95C9JLR9 678 aaPredicted RBP8.5□□□□□ -1.05
CXXC4-203ENST00000515509 IRF6O14896 467 aa8.5□□□□□ -1.05
CXXC4-203ENST00000515509 DXOO77932 396 aaKnown RBP8.5□□□□□ -1.05
CXXC4-203ENST00000515509 USP46P62068 366 aa8.5□□□□□ -1.05
CXXC4-203ENST00000515509 SNIP1Q8TAD8 396 aaKnown RBP8.5□□□□□ -1.05
CXXC4-203ENST00000515509 HLA-CQ95604 372 aa8.5□□□□□ -1.05
CXXC4-203ENST00000515509 SMPD1P17405 629 aa8.49□□□□□ -1.05
CXXC4-203ENST00000515509 LCE2AQ5TA79 106 aaPredicted RBP8.49□□□□□ -1.05
CXXC4-203ENST00000515509 MRGPRX2Q96LB1 330 aa8.49□□□□□ -1.05
CXXC4-203ENST00000515509 CCDC24Q8N4L8 307 aa8.48□□□□□ -1.05
CXXC4-203ENST00000515509 MINK1Q8N4C8 1332 aaPredicted RBP8.48□□□□□ -1.05
CXXC4-203ENST00000515509 HOXA2O43364 376 aa8.47□□□□□ -1.05
CXXC4-203ENST00000515509 J3QL48 77 aa8.46□□□□□ -1.06
CXXC4-203ENST00000515509 CCDC102AQ96A19 550 aa8.46□□□□□ -1.06
CXXC4-203ENST00000515509 REPIN1Q9BWE0 567 aaKnown RBP8.46□□□□□ -1.06
CXXC4-203ENST00000515509 GUCA2AQ02747 115 aa8.45□□□□□ -1.06
CXXC4-203ENST00000515509 WFS1O76024 890 aa8.44□□□□□ -1.06
CXXC4-203ENST00000515509 GPCPD1Q9NPB8 672 aa8.44□□□□□ -1.06
CXXC4-203ENST00000515509 ATP13A2Q9NQ11 1180 aa8.44□□□□□ -1.06
CXXC4-203ENST00000515509 JUNDP17535 347 aa8.43□□□□□ -1.06
CXXC4-203ENST00000515509 CLCN1P35523 988 aa8.43□□□□□ -1.06
CXXC4-203ENST00000515509 WNT7BP56706 349 aa8.43□□□□□ -1.06
CXXC4-203ENST00000515509 RC3H1Q5TC82 1133 aaKnown RBP8.43□□□□□ -1.06
CXXC4-203ENST00000515509 SKOR1P84550 965 aa8.42□□□□□ -1.06
CXXC4-203ENST00000515509 SYMPKQ92797 1274 aaKnown RBP8.42□□□□□ -1.06
CXXC4-203ENST00000515509 HPS1Q92902 700 aa8.42□□□□□ -1.06
CXXC4-203ENST00000515509 FAM217BQ9NTX9 383 aaPredicted RBP8.42□□□□□ -1.06
CXXC4-203ENST00000515509 NFX1Q12986 1120 aaKnown RBP8.4□□□□□ -1.06
CXXC4-203ENST00000515509 NUTM1Q86Y26 1132 aa8.4□□□□□ -1.06
CXXC4-203ENST00000515509 KRI1Q8N9T8 703 aaKnown RBP8.4□□□□□ -1.06
CXXC4-203ENST00000515509 SENP2Q9HC62 589 aa8.4□□□□□ -1.06
CXXC4-203ENST00000515509 SNRPBP14678 240 aaKnown RBP8.39□□□□□ -1.07
CXXC4-203ENST00000515509 RETREG3Q86VR2 466 aa8.39□□□□□ -1.07
CXXC4-203ENST00000515509 TRIM47Q96LD4 638 aa8.39□□□□□ -1.07
CXXC4-203ENST00000515509 NUDT12Q9BQG2 462 aa8.39□□□□□ -1.07
CXXC4-203ENST00000515509 ALDH1A1P00352 501 aa8.37□□□□□ -1.07
CXXC4-203ENST00000515509 FDX1P10109 184 aa8.36□□□□□ -1.07
CXXC4-203ENST00000515509 PTCRAQ6ISU1 281 aaPredicted RBP8.36□□□□□ -1.07
CXXC4-203ENST00000515509 KIFC2Q96AC6 838 aa8.36□□□□□ -1.07
CXXC4-203ENST00000515509 C6orf229H3BNL8 230 aa8.35□□□□□ -1.07
CXXC4-203ENST00000515509 TERTO14746 1132 aaKnown RBP8.35□□□□□ -1.07
CXXC4-203ENST00000515509 WIPF1O43516 503 aa8.35□□□□□ -1.07
CXXC4-203ENST00000515509 EHBP1Q8NDI1 1231 aa8.35□□□□□ -1.07
CXXC4-203ENST00000515509 PCDHGC3Q9UN70 934 aa8.34□□□□□ -1.07
CXXC4-203ENST00000515509 SIAH2O43255 324 aa8.33□□□□□ -1.08
CXXC4-203ENST00000515509 MS4A1P11836 297 aa8.33□□□□□ -1.08
CXXC4-203ENST00000515509 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.33□□□□□ -1.08
CXXC4-203ENST00000515509 CCNYL3P0C7X3 344 aa8.32□□□□□ -1.08
CXXC4-203ENST00000515509 SSTR3P32745 418 aaPredicted RBP8.32□□□□□ -1.08
CXXC4-203ENST00000515509 INSM1Q01101 510 aaPredicted RBP8.32□□□□□ -1.08
CXXC4-203ENST00000515509 BCANQ96GW7 911 aa8.32□□□□□ -1.08
CXXC4-203ENST00000515509 WASF2Q9Y6W5 498 aa8.32□□□□□ -1.08
CXXC4-203ENST00000515509 LCE2CQ5TA81 110 aa8.31□□□□□ -1.08
CXXC4-203ENST00000515509 SPIRE2Q8WWL2 714 aa8.31□□□□□ -1.08
CXXC4-203ENST00000515509 STK17AQ9UEE5 414 aa8.31□□□□□ -1.08
CXXC4-203ENST00000515509 SH3BP2P78314 561 aa8.3□□□□□ -1.08
CXXC4-203ENST00000515509 PTPRNQ16849 979 aa8.3□□□□□ -1.08
CXXC4-203ENST00000515509 MOXD2PA6NHM9 499 aa8.29□□□□□ -1.08
CXXC4-203ENST00000515509 CAPN5O15484 640 aaPredicted RBP8.29□□□□□ -1.08
CXXC4-203ENST00000515509 BMP1P13497 986 aa8.29□□□□□ -1.08
CXXC4-203ENST00000515509 NDUFV2P19404 249 aa8.29□□□□□ -1.08
CXXC4-203ENST00000515509 UNC93B1Q9H1C4 597 aa8.29□□□□□ -1.08
CXXC4-203ENST00000515509 TTLL12Q14166 644 aaPredicted RBP8.28□□□□□ -1.08
CXXC4-203ENST00000515509 TRIM46Q7Z4K8 759 aa8.28□□□□□ -1.08
CXXC4-203ENST00000515509 EVA1BQ9NVM1 165 aa8.28□□□□□ -1.08
CXXC4-203ENST00000515509 KCNH2Q12809 1159 aa8.27□□□□□ -1.09
CXXC4-203ENST00000515509 LINC01559Q495D7 138 aa8.27□□□□□ -1.09
CXXC4-203ENST00000515509 PRR7Q8TB68 274 aa8.27□□□□□ -1.09
CXXC4-203ENST00000515509 MTMR2Q13614 643 aa8.26□□□□□ -1.09
CXXC4-203ENST00000515509 SLC16A10Q8TF71 515 aa8.26□□□□□ -1.09
CXXC4-203ENST00000515509 BAP1Q92560 729 aa8.26□□□□□ -1.09
CXXC4-203ENST00000515509 TLL2Q9Y6L7 1015 aa8.26□□□□□ -1.09
CXXC4-203ENST00000515509 SPDYE5A6NIY4 337 aa8.25□□□□□ -1.09
CXXC4-203ENST00000515509 AMHR2Q16671 573 aa8.25□□□□□ -1.09
CXXC4-203ENST00000515509 GIGYF2Q6Y7W6 1299 aaKnown RBP8.25□□□□□ -1.09
CXXC4-203ENST00000515509 BARGINQ6ZT62 677 aa8.25□□□□□ -1.09
CXXC4-203ENST00000515509 NXF1Q9UBU9 619 aaKnown RBP8.25□□□□□ -1.09
CXXC4-203ENST00000515509 DESI1Q6ICB0 168 aa8.24□□□□□ -1.09
CXXC4-203ENST00000515509 ZNF511Q8NB15 262 aa8.24□□□□□ -1.09
CXXC4-203ENST00000515509 PLEKHG3A1L390 1219 aa8.23□□□□□ -1.09
CXXC4-203ENST00000515509 ZMYND10O75800 440 aa8.23□□□□□ -1.09
CXXC4-203ENST00000515509 VARSP26640 1264 aaKnown RBP8.23□□□□□ -1.09
CXXC4-203ENST00000515509 BEGAINQ9BUH8 593 aa8.23□□□□□ -1.09
CXXC4-203ENST00000515509 NNTQ13423 1086 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 416.2 ms