RNA–Protein interactions for RNA: ENST00000515478.1

CENPE-207, Transcript of centromere protein E, humanhuman

TSL 5

Gene CENPE, Length 291 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPE-207ENST00000515478 POTECB2RU33 542 aa13.51□□□□□ -0.25
CENPE-207ENST00000515478 IRF6O14896 467 aa13.51□□□□□ -0.25
CENPE-207ENST00000515478 TOR4AQ9NXH8 423 aa13.49□□□□□ -0.25
CENPE-207ENST00000515478 MINK1Q8N4C8 1332 aaPredicted RBP13.48□□□□□ -0.25
CENPE-207ENST00000515478 USB1Q9BQ65 265 aaKnown RBP13.48□□□□□ -0.25
CENPE-207ENST00000515478 AXIN1O15169 862 aa13.47□□□□□ -0.25
CENPE-207ENST00000515478 USP46P62068 366 aa13.47□□□□□ -0.25
CENPE-207ENST00000515478 VSIG10Q8N0Z9 540 aa13.47□□□□□ -0.25
CENPE-207ENST00000515478 KRI1Q8N9T8 703 aaKnown RBP13.47□□□□□ -0.25
CENPE-207ENST00000515478 CCDC24Q8N4L8 307 aa13.46□□□□□ -0.25
CENPE-207ENST00000515478 TRIM32Q13049 653 aa13.45□□□□□ -0.26
CENPE-207ENST00000515478 MMP16P51512 607 aa13.44□□□□□ -0.26
CENPE-207ENST00000515478 CCDC102AQ96A19 550 aa13.44□□□□□ -0.26
CENPE-207ENST00000515478 CTC1Q2NKJ3 1217 aa13.43□□□□□ -0.26
CENPE-207ENST00000515478 CRIPAKQ8N1N5 446 aa13.43□□□□□ -0.26
CENPE-207ENST00000515478 AVPP01185 164 aa13.42□□□□□ -0.26
CENPE-207ENST00000515478 HLA-CQ95604 372 aa13.42□□□□□ -0.26
CENPE-207ENST00000515478 WNT7AO00755 349 aa13.41□□□□□ -0.26
CENPE-207ENST00000515478 CLCN1P35523 988 aa13.41□□□□□ -0.26
CENPE-207ENST00000515478 GPCPD1Q9NPB8 672 aa13.41□□□□□ -0.26
CENPE-207ENST00000515478 HOXA2O43364 376 aa13.4□□□□□ -0.26
CENPE-207ENST00000515478 DXOO77932 396 aaKnown RBP13.4□□□□□ -0.26
CENPE-207ENST00000515478 NUTM1Q86Y26 1132 aa13.4□□□□□ -0.26
CENPE-207ENST00000515478 SNIP1Q8TAD8 396 aaKnown RBP13.4□□□□□ -0.26
CENPE-207ENST00000515478 DACH1Q9UI36 760 aa13.39□□□□□ -0.27
CENPE-207ENST00000515478 C11orf95C9JLR9 678 aaPredicted RBP13.37□□□□□ -0.27
CENPE-207ENST00000515478 GUCA2AQ02747 115 aa13.37□□□□□ -0.27
CENPE-207ENST00000515478 MRGPRX2Q96LB1 330 aa13.37□□□□□ -0.27
CENPE-207ENST00000515478 REPIN1Q9BWE0 567 aaKnown RBP13.37□□□□□ -0.27
CENPE-207ENST00000515478 GMPR2Q9P2T1 348 aaKnown RBP13.36□□□□□ -0.27
CENPE-207ENST00000515478 FAM217BQ9NTX9 383 aaPredicted RBP13.35□□□□□ -0.27
CENPE-207ENST00000515478 SMCPP49901 116 aaPredicted RBP13.34□□□□□ -0.27
CENPE-207ENST00000515478 SMPD1P17405 629 aa13.33□□□□□ -0.28
CENPE-207ENST00000515478 JUNDP17535 347 aa13.32□□□□□ -0.28
CENPE-207ENST00000515478 SYMPKQ92797 1274 aaKnown RBP13.32□□□□□ -0.28
CENPE-207ENST00000515478 TREML4Q6UXN2 200 aa13.31□□□□□ -0.28
CENPE-207ENST00000515478 J3QL48 77 aa13.3□□□□□ -0.28
CENPE-207ENST00000515478 RC3H1Q5TC82 1133 aaKnown RBP13.3□□□□□ -0.28
CENPE-207ENST00000515478 WNT7BP56706 349 aa13.29□□□□□ -0.28
CENPE-207ENST00000515478 C6orf229H3BNL8 230 aa13.28□□□□□ -0.28
CENPE-207ENST00000515478 RETREG3Q86VR2 466 aa13.28□□□□□ -0.28
CENPE-207ENST00000515478 NUDT12Q9BQG2 462 aa13.28□□□□□ -0.28
CENPE-207ENST00000515478 FDX1P10109 184 aa13.27□□□□□ -0.29
CENPE-207ENST00000515478 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.26□□□□□ -0.29
CENPE-207ENST00000515478 TTLL12Q14166 644 aaPredicted RBP13.25□□□□□ -0.29
CENPE-207ENST00000515478 ATP13A2Q9NQ11 1180 aa13.25□□□□□ -0.29
CENPE-207ENST00000515478 SSTR3P32745 418 aaPredicted RBP13.24□□□□□ -0.29
CENPE-207ENST00000515478 SKOR1P84550 965 aa13.24□□□□□ -0.29
CENPE-207ENST00000515478 ALDH1A1P00352 501 aa13.23□□□□□ -0.29
CENPE-207ENST00000515478 HPS1Q92902 700 aa13.23□□□□□ -0.29
CENPE-207ENST00000515478 SENP2Q9HC62 589 aa13.23□□□□□ -0.29
CENPE-207ENST00000515478 WFS1O76024 890 aa13.22□□□□□ -0.29
CENPE-207ENST00000515478 EHBP1Q8NDI1 1231 aa13.22□□□□□ -0.29
CENPE-207ENST00000515478 MS4A1P11836 297 aa13.21□□□□□ -0.29
CENPE-207ENST00000515478 PCDHGC3Q9UN70 934 aa13.19□□□□□ -0.3
CENPE-207ENST00000515478 CCNYL3P0C7X3 344 aa13.18□□□□□ -0.3
CENPE-207ENST00000515478 SPIRE2Q8WWL2 714 aa13.18□□□□□ -0.3
CENPE-207ENST00000515478 WASF2Q9Y6W5 498 aa13.18□□□□□ -0.3
CENPE-207ENST00000515478 PTCRAQ6ISU1 281 aaPredicted RBP13.17□□□□□ -0.3
CENPE-207ENST00000515478 KIFC2Q96AC6 838 aa13.17□□□□□ -0.3
CENPE-207ENST00000515478 SNRPBP14678 240 aaKnown RBP13.16□□□□□ -0.3
CENPE-207ENST00000515478 NDUFV2P19404 249 aa13.16□□□□□ -0.3
CENPE-207ENST00000515478 TRIM47Q96LD4 638 aa13.16□□□□□ -0.3
CENPE-207ENST00000515478 LCE2AQ5TA79 106 aaPredicted RBP13.14□□□□□ -0.31
CENPE-207ENST00000515478 BARGINQ6ZT62 677 aa13.14□□□□□ -0.31
CENPE-207ENST00000515478 MOXD2PA6NHM9 499 aa13.13□□□□□ -0.31
CENPE-207ENST00000515478 PTPRNQ16849 979 aa13.13□□□□□ -0.31
CENPE-207ENST00000515478 MTMR2Q13614 643 aa13.12□□□□□ -0.31
CENPE-207ENST00000515478 GIGYF2Q6Y7W6 1299 aaKnown RBP13.12□□□□□ -0.31
CENPE-207ENST00000515478 PRR7Q8TB68 274 aa13.12□□□□□ -0.31
CENPE-207ENST00000515478 UNC93B1Q9H1C4 597 aa13.12□□□□□ -0.31
CENPE-207ENST00000515478 SH3BP2P78314 561 aa13.11□□□□□ -0.31
CENPE-207ENST00000515478 NFX1Q12986 1120 aaKnown RBP13.11□□□□□ -0.31
CENPE-207ENST00000515478 LINC01559Q495D7 138 aa13.11□□□□□ -0.31
CENPE-207ENST00000515478 SPDYE5A6NIY4 337 aa13.1□□□□□ -0.31
CENPE-207ENST00000515478 ZMYND10O75800 440 aa13.1□□□□□ -0.31
CENPE-207ENST00000515478 AMHR2Q16671 573 aa13.1□□□□□ -0.31
CENPE-207ENST00000515478 BEGAINQ9BUH8 593 aa13.1□□□□□ -0.31
CENPE-207ENST00000515478 EVA1BQ9NVM1 165 aa13.09□□□□□ -0.31
CENPE-207ENST00000515478 CAPN5O15484 640 aaPredicted RBP13.08□□□□□ -0.32
CENPE-207ENST00000515478 SIAH2O43255 324 aa13.08□□□□□ -0.32
CENPE-207ENST00000515478 KCNH2Q12809 1159 aa13.08□□□□□ -0.32
CENPE-207ENST00000515478 ZC3H15Q8WU90 426 aaKnown RBP13.08□□□□□ -0.32
CENPE-207ENST00000515478 TERTO14746 1132 aaKnown RBP13.07□□□□□ -0.32
CENPE-207ENST00000515478 DIXDC1Q155Q3 683 aa13.07□□□□□ -0.32
CENPE-207ENST00000515478 BAP1Q92560 729 aa13.07□□□□□ -0.32
CENPE-207ENST00000515478 CTHP32929 405 aa13.05□□□□□ -0.32
CENPE-207ENST00000515478 INSM1Q01101 510 aaPredicted RBP13.05□□□□□ -0.32
CENPE-207ENST00000515478 BMP1P13497 986 aa13.04□□□□□ -0.32
CENPE-207ENST00000515478 DESI1Q6ICB0 168 aa13.04□□□□□ -0.32
CENPE-207ENST00000515478 TBC1D2Q9BYX2 928 aa13.04□□□□□ -0.32
CENPE-207ENST00000515478 PLEKHG3A1L390 1219 aa13.03□□□□□ -0.32
CENPE-207ENST00000515478 ZNF511Q8NB15 262 aa13.03□□□□□ -0.32
CENPE-207ENST00000515478 TLL2Q9Y6L7 1015 aa13.03□□□□□ -0.32
CENPE-207ENST00000515478 SLC16A10Q8TF71 515 aa13.02□□□□□ -0.33
CENPE-207ENST00000515478 VARSP26640 1264 aaKnown RBP13.01□□□□□ -0.33
CENPE-207ENST00000515478 WIPF1O43516 503 aa13□□□□□ -0.33
CENPE-207ENST00000515478 RSBN1LQ6PCB5 846 aaPredicted RBP13□□□□□ -0.33
CENPE-207ENST00000515478 GJA5P36382 358 aa12.99□□□□□ -0.33
CENPE-207ENST00000515478 STK17AQ9UEE5 414 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms