RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 RSPH6AQ9H0K4 717 aa7.87□□□□□ -1.15
CAST-242ENST00000515063 MOXD2PA6NHM9 499 aa7.86□□□□□ -1.15
CAST-242ENST00000515063 MMP16P51512 607 aa7.86□□□□□ -1.15
CAST-242ENST00000515063 GUCA2AQ02747 115 aa7.86□□□□□ -1.15
CAST-242ENST00000515063 PPEF1O14829 653 aaPredicted RBP7.85□□□□□ -1.15
CAST-242ENST00000515063 LAPTM4AQ15012 233 aa7.85□□□□□ -1.15
CAST-242ENST00000515063 RSBN1LQ6PCB5 846 aaPredicted RBP7.85□□□□□ -1.15
CAST-242ENST00000515063 DDRGK1Q96HY6 314 aa7.85□□□□□ -1.15
CAST-242ENST00000515063 FCF1Q9Y324 198 aaKnown RBP7.85□□□□□ -1.15
CAST-242ENST00000515063 ZBTB24O43167 697 aaPredicted RBP7.84□□□□□ -1.15
CAST-242ENST00000515063 NDUFV2P19404 249 aa7.84□□□□□ -1.15
CAST-242ENST00000515063 RPIAP49247 311 aa7.84□□□□□ -1.15
CAST-242ENST00000515063 MTMR2Q13614 643 aa7.84□□□□□ -1.15
CAST-242ENST00000515063 KDM4CQ9H3R0 1056 aa7.84□□□□□ -1.15
CAST-242ENST00000515063 PRDM9Q9NQV7 894 aa7.84□□□□□ -1.15
CAST-242ENST00000515063 SPTLC1O15269 473 aa7.83□□□□□ -1.16
CAST-242ENST00000515063 DXOO77932 396 aaKnown RBP7.83□□□□□ -1.16
CAST-242ENST00000515063 JUNDP17535 347 aa7.83□□□□□ -1.16
CAST-242ENST00000515063 TPRNQ4KMQ1 711 aa7.83□□□□□ -1.16
CAST-242ENST00000515063 RIC3Q7Z5B4 369 aa7.83□□□□□ -1.16
CAST-242ENST00000515063 ZBTB3Q9H5J0 574 aa7.83□□□□□ -1.16
CAST-242ENST00000515063 PCDHGC3Q9UN70 934 aa7.83□□□□□ -1.16
CAST-242ENST00000515063 CD2BP2O95400 341 aaKnown RBP7.82□□□□□ -1.16
CAST-242ENST00000515063 PRPF38BQ5VTL8 546 aaKnown RBP7.82□□□□□ -1.16
CAST-242ENST00000515063 TUSC1Q2TAM9 212 aa7.81□□□□□ -1.16
CAST-242ENST00000515063 MYSM1Q5VVJ2 828 aa7.81□□□□□ -1.16
CAST-242ENST00000515063 SPRYD7Q5W111 196 aa7.81□□□□□ -1.16
CAST-242ENST00000515063 ZNF598Q86UK7 904 aaKnown RBP7.81□□□□□ -1.16
CAST-242ENST00000515063 CLK2P49760 499 aaKnown RBP7.8□□□□□ -1.16
CAST-242ENST00000515063 DESI1Q6ICB0 168 aa7.8□□□□□ -1.16
CAST-242ENST00000515063 SYMPKQ92797 1274 aaKnown RBP7.8□□□□□ -1.16
CAST-242ENST00000515063 GPBP1L1Q9HC44 474 aaPredicted RBP7.8□□□□□ -1.16
CAST-242ENST00000515063 NEUROD2Q15784 382 aa7.79□□□□□ -1.16
CAST-242ENST00000515063 ZNF697Q5TEC3 545 aa7.79□□□□□ -1.16
CAST-242ENST00000515063 LIAT1Q6ZQX7 453 aa7.79□□□□□ -1.16
CAST-242ENST00000515063 PRR7Q8TB68 274 aa7.79□□□□□ -1.16
CAST-242ENST00000515063 GFRA3O60609 400 aa7.78□□□□□ -1.16
CAST-242ENST00000515063 PLA2G2CQ5R387 149 aa7.78□□□□□ -1.16
CAST-242ENST00000515063 CCDC24Q8N4L8 307 aa7.78□□□□□ -1.16
CAST-242ENST00000515063 NUDT12Q9BQG2 462 aa7.78□□□□□ -1.16
CAST-242ENST00000515063 PDZRN3Q9UPQ7 1066 aa7.78□□□□□ -1.16
CAST-242ENST00000515063 NUTM2BA6NNL0 878 aaPredicted RBP7.77□□□□□ -1.17
CAST-242ENST00000515063 NUTM2EB1AL46 878 aaPredicted RBP7.77□□□□□ -1.17
CAST-242ENST00000515063 NRG2O14511 850 aaPredicted RBP7.77□□□□□ -1.17
CAST-242ENST00000515063 PTPRNQ16849 979 aa7.77□□□□□ -1.17
CAST-242ENST00000515063 SH3D19Q5HYK7 790 aa7.77□□□□□ -1.17
CAST-242ENST00000515063 NUTM2DQ5VT03 806 aaPredicted RBP7.77□□□□□ -1.17
CAST-242ENST00000515063 NUTM2AQ8IVF1 878 aaPredicted RBP7.77□□□□□ -1.17
CAST-242ENST00000515063 CCNYL3P0C7X3 344 aa7.76□□□□□ -1.17
CAST-242ENST00000515063 HRCP23327 699 aa7.76□□□□□ -1.17
CAST-242ENST00000515063 CSPP1Q1MSJ5 1256 aa7.76□□□□□ -1.17
CAST-242ENST00000515063 EMID1Q96A84 441 aaPredicted RBP7.76□□□□□ -1.17
CAST-242ENST00000515063 PCDHB15Q9Y5E8 787 aa7.76□□□□□ -1.17
CAST-242ENST00000515063 PRR20EP86478 221 aa7.75□□□□□ -1.17
CAST-242ENST00000515063 PRR20CP86479 221 aa7.75□□□□□ -1.17
CAST-242ENST00000515063 PRR20DP86480 221 aa7.75□□□□□ -1.17
CAST-242ENST00000515063 PRR20BP86481 221 aa7.75□□□□□ -1.17
CAST-242ENST00000515063 PRR20AP86496 221 aa7.75□□□□□ -1.17
CAST-242ENST00000515063 TRIM32Q13049 653 aa7.75□□□□□ -1.17
CAST-242ENST00000515063 SKIV2LQ15477 1246 aaKnown RBP7.75□□□□□ -1.17
CAST-242ENST00000515063 HELBQ8NG08 1087 aaPredicted RBP7.75□□□□□ -1.17
CAST-242ENST00000515063 FAM117AQ9C073 453 aa7.75□□□□□ -1.17
CAST-242ENST00000515063 LIMD1Q9UGP4 676 aa7.75□□□□□ -1.17
CAST-242ENST00000515063 ATP1B4Q9UN42 357 aaPredicted RBP7.75□□□□□ -1.17
CAST-242ENST00000515063 POLR3EQ9NVU0 708 aa7.74□□□□□ -1.17
CAST-242ENST00000515063 LILRB3O75022 631 aa7.73□□□□□ -1.17
CAST-242ENST00000515063 Q6ZNB5 142 aa7.73□□□□□ -1.17
CAST-242ENST00000515063 CABLES1Q8TDN4 633 aa7.73□□□□□ -1.17
CAST-242ENST00000515063 LYPD8Q6UX82 237 aa7.72□□□□□ -1.17
CAST-242ENST00000515063 CFAP99D6REC4 459 aa7.71□□□□□ -1.18
CAST-242ENST00000515063 BRPF1P55201 1214 aaPredicted RBP7.71□□□□□ -1.18
CAST-242ENST00000515063 WNT7BP56706 349 aa7.71□□□□□ -1.18
CAST-242ENST00000515063 QPCTQ16769 361 aa7.71□□□□□ -1.18
CAST-242ENST00000515063 TSC1Q92574 1164 aa7.71□□□□□ -1.18
CAST-242ENST00000515063 GOPCQ9HD26 462 aa7.71□□□□□ -1.18
CAST-242ENST00000515063 EVA1BQ9NVM1 165 aa7.71□□□□□ -1.18
CAST-242ENST00000515063 PLEKHG3A1L390 1219 aa7.7□□□□□ -1.18
CAST-242ENST00000515063 GDF9O60383 454 aa7.7□□□□□ -1.18
CAST-242ENST00000515063 KCNH2Q12809 1159 aa7.7□□□□□ -1.18
CAST-242ENST00000515063 FOXC1Q12948 553 aa7.7□□□□□ -1.18
CAST-242ENST00000515063 TRIM67Q6ZTA4 783 aa7.7□□□□□ -1.18
CAST-242ENST00000515063 TNFRSF10AO00220 468 aa7.69□□□□□ -1.18
CAST-242ENST00000515063 WNT7AO00755 349 aa7.69□□□□□ -1.18
CAST-242ENST00000515063 CTHP32929 405 aa7.69□□□□□ -1.18
CAST-242ENST00000515063 PCMTD1Q96MG8 357 aaPredicted RBP7.69□□□□□ -1.18
CAST-242ENST00000515063 UNC93B1Q9H1C4 597 aa7.69□□□□□ -1.18
CAST-242ENST00000515063 PKDCCQ504Y2 493 aa7.68□□□□□ -1.18
CAST-242ENST00000515063 CYP4X1Q8N118 509 aa7.68□□□□□ -1.18
CAST-242ENST00000515063 DGAT1O75907 488 aa7.67□□□□□ -1.18
CAST-242ENST00000515063 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.67□□□□□ -1.18
CAST-242ENST00000515063 PKD2L1Q9P0L9 805 aa7.67□□□□□ -1.18
CAST-242ENST00000515063 RTL5Q5HYW3 569 aaPredicted RBP7.66□□□□□ -1.18
CAST-242ENST00000515063 PPP2R2DQ66LE6 453 aa7.66□□□□□ -1.18
CAST-242ENST00000515063 PTCRAQ6ISU1 281 aaPredicted RBP7.66□□□□□ -1.18
CAST-242ENST00000515063 ARMC2Q8NEN0 867 aa7.66□□□□□ -1.18
CAST-242ENST00000515063 IL27Q8NEV9 243 aa7.66□□□□□ -1.18
CAST-242ENST00000515063 TTC24A2A3L6 582 aaPredicted RBP7.65□□□□□ -1.18
CAST-242ENST00000515063 F12P00748 615 aaPredicted RBP7.65□□□□□ -1.18
CAST-242ENST00000515063 EHBP1Q8NDI1 1231 aa7.65□□□□□ -1.18
CAST-242ENST00000515063 NISCHQ9Y2I1 1504 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms