RNA–Protein interactions for RNA: ENST00000514967.5

PROM1-218, Transcript of prominin 1, humanhuman

TSL 5

Gene PROM1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-218ENST00000514967 PLEKHH1Q9ULM0 1364 aa22.9■■□□□ 1.26
PROM1-218ENST00000514967 ADGRB2O60241 1585 aa22.9■■□□□ 1.26
PROM1-218ENST00000514967 USP47Q96K76 1375 aa22.89■■□□□ 1.26
PROM1-218ENST00000514967 MSH6P52701 1360 aa22.89■■□□□ 1.25
PROM1-218ENST00000514967 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.88■■□□□ 1.25
PROM1-218ENST00000514967 CDC42BPGQ6DT37 1551 aa22.87■■□□□ 1.25
PROM1-218ENST00000514967 EIF4G2P78344 907 aaKnown RBP eCLIP22.86■■□□□ 1.25
PROM1-218ENST00000514967 CADPS2Q86UW7 1296 aa22.86■■□□□ 1.25
PROM1-218ENST00000514967 NALCNQ8IZF0 1738 aa22.85■■□□□ 1.25
PROM1-218ENST00000514967 PUS7Q96PZ0 661 aaKnown RBP22.84■■□□□ 1.25
PROM1-218ENST00000514967 ST20-MTHFSA0A0A6YYL1 179 aa22.83■■□□□ 1.25
PROM1-218ENST00000514967 TESK2Q96S53 571 aa22.83■■□□□ 1.25
PROM1-218ENST00000514967 QRICH2Q9H0J4 1663 aa22.82■■□□□ 1.24
PROM1-218ENST00000514967 C14orf37Q86TY3 774 aa22.81■■□□□ 1.24
PROM1-218ENST00000514967 WASLO00401 505 aaPredicted RBP22.8■■□□□ 1.24
PROM1-218ENST00000514967 ATF3P18847 181 aa22.8■■□□□ 1.24
PROM1-218ENST00000514967 RBM33Q96EV2 1170 aaKnown RBP22.79■■□□□ 1.24
PROM1-218ENST00000514967 ANKARQ7Z5J8 1434 aa22.78■■□□□ 1.24
PROM1-218ENST00000514967 EVC2Q86UK5 1308 aa22.78■■□□□ 1.24
PROM1-218ENST00000514967 TOM1O60784 492 aa22.77■■□□□ 1.24
PROM1-218ENST00000514967 SAFB2Q14151 953 aaKnown RBP eCLIP22.77■■□□□ 1.24
PROM1-218ENST00000514967 MINK1Q8N4C8 1332 aaPredicted RBP22.77■■□□□ 1.24
PROM1-218ENST00000514967 HSPA5P11021 654 aaKnown RBP22.76■■□□□ 1.23
PROM1-218ENST00000514967 MST1RQ04912 1400 aa22.75■■□□□ 1.23
PROM1-218ENST00000514967 FMN2Q9NZ56 1722 aa22.75■■□□□ 1.23
PROM1-218ENST00000514967 TULP4Q9NRJ4 1543 aa22.74■■□□□ 1.23
PROM1-218ENST00000514967 SLAIN2Q9P270 581 aa22.74■■□□□ 1.23
PROM1-218ENST00000514967 CDCA8Q53HL2 280 aa22.73■■□□□ 1.23
PROM1-218ENST00000514967 CDK19Q9BWU1 502 aa22.73■■□□□ 1.23
PROM1-218ENST00000514967 TMF1P82094 1093 aa22.72■■□□□ 1.23
PROM1-218ENST00000514967 C1orf167Q5SNV9 1468 aa22.72■■□□□ 1.23
PROM1-218ENST00000514967 HIRIP3Q9BW71 556 aaPredicted RBP22.71■■□□□ 1.23
PROM1-218ENST00000514967 ATAD2Q6PL18 1390 aa22.69■■□□□ 1.22
PROM1-218ENST00000514967 ATP7BP35670 1465 aa22.68■■□□□ 1.22
PROM1-218ENST00000514967 CCDC61Q9Y6R9 512 aa22.68■■□□□ 1.22
PROM1-218ENST00000514967 NINLQ9Y2I6 1382 aa22.66■■□□□ 1.22
PROM1-218ENST00000514967 UBAP1LF5GYI3 381 aa22.66■■□□□ 1.22
PROM1-218ENST00000514967 NUDT16Q96DE0 195 aaKnown RBP22.66■■□□□ 1.22
PROM1-218ENST00000514967 USP32Q8NFA0 1604 aa22.66■■□□□ 1.22
PROM1-218ENST00000514967 PRR36Q9H6K5 1346 aa22.65■■□□□ 1.22
PROM1-218ENST00000514967 PLEKHG3A1L390 1219 aa22.65■■□□□ 1.22
PROM1-218ENST00000514967 SRPK2P78362 688 aaKnown RBP22.65■■□□□ 1.22
PROM1-218ENST00000514967 DISP3Q9P2K9 1392 aa22.63■■□□□ 1.21
PROM1-218ENST00000514967 ITSN1Q15811 1721 aa22.63■■□□□ 1.21
PROM1-218ENST00000514967 TOPAZ1Q8N9V7 1692 aa22.62■■□□□ 1.21
PROM1-218ENST00000514967 CABP2Q9NPB3 220 aa22.62■■□□□ 1.21
PROM1-218ENST00000514967 KIF1AQ12756 1690 aa22.62■■□□□ 1.21
PROM1-218ENST00000514967 BRINP3Q76B58 766 aa22.61■■□□□ 1.21
PROM1-218ENST00000514967 FBXO41Q8TF61 875 aa22.59■■□□□ 1.21
PROM1-218ENST00000514967 PHF8Q9UPP1 1060 aa22.59■■□□□ 1.21
PROM1-218ENST00000514967 POLR3AO14802 1390 aaPredicted RBP22.59■■□□□ 1.21
PROM1-218ENST00000514967 ESCO1Q5FWF5 840 aa22.58■■□□□ 1.21
PROM1-218ENST00000514967 ORAI2Q96SN7 254 aa22.58■■□□□ 1.21
PROM1-218ENST00000514967 BRD4O60885 1362 aaPredicted RBP22.58■■□□□ 1.21
PROM1-218ENST00000514967 ROBO1Q9Y6N7 1651 aa22.57■■□□□ 1.2
PROM1-218ENST00000514967 PPIP5K1Q6PFW1 1433 aa22.57■■□□□ 1.2
PROM1-218ENST00000514967 RGPD8O14715 1765 aaPredicted RBP22.56■■□□□ 1.2
PROM1-218ENST00000514967 AHDC1Q5TGY3 1603 aaPredicted RBP22.56■■□□□ 1.2
PROM1-218ENST00000514967 NPHP3Q7Z494 1330 aa22.56■■□□□ 1.2
PROM1-218ENST00000514967 ZNF692Q9BU19 519 aaPredicted RBP22.55■■□□□ 1.2
PROM1-218ENST00000514967 NUTM2FA1L443 756 aa22.54■■□□□ 1.2
PROM1-218ENST00000514967 C11orf95C9JLR9 678 aaPredicted RBP22.54■■□□□ 1.2
PROM1-218ENST00000514967 CPSF1Q10570 1443 aaKnown RBP22.54■■□□□ 1.2
PROM1-218ENST00000514967 NHSL1Q5SYE7 1610 aa22.53■■□□□ 1.2
PROM1-218ENST00000514967 CABP1Q9NZU7 370 aa22.53■■□□□ 1.2
PROM1-218ENST00000514967 SOS2Q07890 1332 aaPredicted RBP22.52■■□□□ 1.2
PROM1-218ENST00000514967 KIF7Q2M1P5 1343 aa22.52■■□□□ 1.2
PROM1-218ENST00000514967 CCDC7Q96M83 1385 aa22.5■■□□□ 1.19
PROM1-218ENST00000514967 PIP4K2BP78356 416 aa22.5■■□□□ 1.19
PROM1-218ENST00000514967 TERF2IPQ9NYB0 399 aa22.5■■□□□ 1.19
PROM1-218ENST00000514967 ACEP12821 1306 aa22.5■■□□□ 1.19
PROM1-218ENST00000514967 NGDNQ8NEJ9 315 aaKnown RBP22.49■■□□□ 1.19
PROM1-218ENST00000514967 PXDNQ92626 1479 aa22.48■■□□□ 1.19
PROM1-218ENST00000514967 CD163L1Q9NR16 1453 aa22.48■■□□□ 1.19
PROM1-218ENST00000514967 FOXO3O43524 673 aa22.48■■□□□ 1.19
PROM1-218ENST00000514967 PSME1Q06323 249 aa22.48■■□□□ 1.19
PROM1-218ENST00000514967 SLC12A5Q9H2X9 1139 aa22.48■■□□□ 1.19
PROM1-218ENST00000514967 WASHC2AQ641Q2 1341 aa22.48■■□□□ 1.19
PROM1-218ENST00000514967 SBNO1A3KN83 1393 aa22.48■■□□□ 1.19
PROM1-218ENST00000514967 ANKRD36BQ8N2N9 1353 aa22.48■■□□□ 1.19
PROM1-218ENST00000514967 PMFBP1Q8TBY8 1022 aa22.47■■□□□ 1.19
PROM1-218ENST00000514967 SSH2Q76I76 1423 aa22.47■■□□□ 1.19
PROM1-218ENST00000514967 MYOM1P52179 1685 aa22.46■■□□□ 1.19
PROM1-218ENST00000514967 AKAP12Q02952 1782 aa22.45■■□□□ 1.19
PROM1-218ENST00000514967 HDGFL2Q7Z4V5 671 aaPredicted RBP22.45■■□□□ 1.18
PROM1-218ENST00000514967 USP6P35125 1406 aa22.45■■□□□ 1.18
PROM1-218ENST00000514967 KRT28Q7Z3Y7 464 aa22.44■■□□□ 1.18
PROM1-218ENST00000514967 TMC1Q8TDI8 760 aa22.44■■□□□ 1.18
PROM1-218ENST00000514967 LRRC59Q96AG4 307 aaKnown RBP22.43■■□□□ 1.18
PROM1-218ENST00000514967 COL16A1Q07092 1604 aaPredicted RBP22.42■■□□□ 1.18
PROM1-218ENST00000514967 A0A1W2PP64 1363 aa22.42■■□□□ 1.18
PROM1-218ENST00000514967 SCAF1Q9H7N4 1312 aaKnown RBP22.42■■□□□ 1.18
PROM1-218ENST00000514967 MON2Q7Z3U7 1717 aa22.42■■□□□ 1.18
PROM1-218ENST00000514967 EDC4Q6P2E9 1401 aaKnown RBP22.41■■□□□ 1.18
PROM1-218ENST00000514967 KTN1Q86UP2 1357 aaKnown RBP22.41■■□□□ 1.18
PROM1-218ENST00000514967 TTC21AQ8NDW8 1320 aa22.41■■□□□ 1.18
PROM1-218ENST00000514967 PHLPP1O60346 1717 aa22.4■■□□□ 1.18
PROM1-218ENST00000514967 TRPM3Q9HCF6 1732 aaPredicted RBP22.4■■□□□ 1.18
PROM1-218ENST00000514967 SPATA31A3Q5VYP0 1347 aa22.4■■□□□ 1.18
PROM1-218ENST00000514967 ZNF316A6NFI3 1004 aaPredicted RBP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms