RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 ACIN1Q9UKV3 1341 aaKnown RBP13.39□□□□□ -0.27
LDHBP3-201ENST00000514909 GCGRP47871 477 aa13.39□□□□□ -0.27
LDHBP3-201ENST00000514909 RSPH4AQ5TD94 716 aa13.39□□□□□ -0.27
LDHBP3-201ENST00000514909 ARHGAP33O14559 1287 aa13.38□□□□□ -0.27
LDHBP3-201ENST00000514909 AEBP1Q8IUX7 1158 aa13.38□□□□□ -0.27
LDHBP3-201ENST00000514909 FDX1P10109 184 aa13.37□□□□□ -0.27
LDHBP3-201ENST00000514909 IRF5Q13568 498 aa13.37□□□□□ -0.27
LDHBP3-201ENST00000514909 PBXIP1Q96AQ6 731 aa13.36□□□□□ -0.27
LDHBP3-201ENST00000514909 ADGRD1Q6QNK2 874 aa13.35□□□□□ -0.27
LDHBP3-201ENST00000514909 PATL2C9JE40 543 aaKnown RBP13.34□□□□□ -0.27
LDHBP3-201ENST00000514909 GPR37L1O60883 481 aa13.32□□□□□ -0.28
LDHBP3-201ENST00000514909 DMRTA1Q5VZB9 504 aa13.32□□□□□ -0.28
LDHBP3-201ENST00000514909 USTQ9Y2C2 406 aa13.32□□□□□ -0.28
LDHBP3-201ENST00000514909 PSEN2P49810 448 aa13.31□□□□□ -0.28
LDHBP3-201ENST00000514909 HDGFL1Q5TGJ6 251 aa13.31□□□□□ -0.28
LDHBP3-201ENST00000514909 HELBQ8NG08 1087 aaPredicted RBP13.31□□□□□ -0.28
LDHBP3-201ENST00000514909 ADAMTS19Q8TE59 1207 aa13.31□□□□□ -0.28
LDHBP3-201ENST00000514909 TRIM34Q9BYJ4 488 aa13.31□□□□□ -0.28
LDHBP3-201ENST00000514909 PCDHGC3Q9UN70 934 aa13.31□□□□□ -0.28
LDHBP3-201ENST00000514909 SMAPO00193 183 aa13.3□□□□□ -0.28
LDHBP3-201ENST00000514909 HRO43593 1189 aa13.3□□□□□ -0.28
LDHBP3-201ENST00000514909 MTMR2Q13614 643 aa13.3□□□□□ -0.28
LDHBP3-201ENST00000514909 TK2O00142 265 aa13.29□□□□□ -0.28
LDHBP3-201ENST00000514909 PROX2Q3B8N5 592 aa13.29□□□□□ -0.28
LDHBP3-201ENST00000514909 HMX1Q9NP08 348 aaPredicted RBP13.29□□□□□ -0.28
LDHBP3-201ENST00000514909 CTDSPL2Q05D32 466 aa13.28□□□□□ -0.28
LDHBP3-201ENST00000514909 SLC10A3P09131 477 aa13.27□□□□□ -0.29
LDHBP3-201ENST00000514909 SRPK2P78362 688 aaKnown RBP13.27□□□□□ -0.29
LDHBP3-201ENST00000514909 CFAP70Q5T0N1 1121 aa13.27□□□□□ -0.29
LDHBP3-201ENST00000514909 TMCO4Q5TGY1 634 aa13.27□□□□□ -0.29
LDHBP3-201ENST00000514909 KCNH8Q96L42 1107 aa13.27□□□□□ -0.29
LDHBP3-201ENST00000514909 SOX11P35716 441 aa13.25□□□□□ -0.29
LDHBP3-201ENST00000514909 ZBED2Q9BTP6 218 aa13.25□□□□□ -0.29
LDHBP3-201ENST00000514909 KCNA1Q09470 495 aa13.24□□□□□ -0.29
LDHBP3-201ENST00000514909 GRIPAP1Q4V328 841 aa13.24□□□□□ -0.29
LDHBP3-201ENST00000514909 SWT1Q5T5J6 900 aaKnown RBP13.24□□□□□ -0.29
LDHBP3-201ENST00000514909 KCNK17Q96T54 332 aa13.24□□□□□ -0.29
LDHBP3-201ENST00000514909 PPP1R12CQ9BZL4 782 aa13.24□□□□□ -0.29
LDHBP3-201ENST00000514909 ALG2Q9H553 416 aa13.24□□□□□ -0.29
LDHBP3-201ENST00000514909 KIAA1468Q9P260 1216 aa13.24□□□□□ -0.29
LDHBP3-201ENST00000514909 BRD1O95696 1058 aa13.23□□□□□ -0.29
LDHBP3-201ENST00000514909 HCSTQ9UBK5 93 aa13.23□□□□□ -0.29
LDHBP3-201ENST00000514909 GUCA2AQ02747 115 aa13.22□□□□□ -0.29
LDHBP3-201ENST00000514909 RGS22Q8NE09 1264 aa13.22□□□□□ -0.29
LDHBP3-201ENST00000514909 GZF1Q9H116 711 aaPredicted RBP13.22□□□□□ -0.29
LDHBP3-201ENST00000514909 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.21□□□□□ -0.29
LDHBP3-201ENST00000514909 CSB-PGBD3P0DP91 1061 aa13.21□□□□□ -0.29
LDHBP3-201ENST00000514909 SLC4A3P48751 1232 aa13.21□□□□□ -0.29
LDHBP3-201ENST00000514909 SLC4A5Q9BY07 1137 aa13.21□□□□□ -0.29
LDHBP3-201ENST00000514909 CFAP99D6REC4 459 aa13.2□□□□□ -0.3
LDHBP3-201ENST00000514909 VAC14Q08AM6 782 aa13.2□□□□□ -0.3
LDHBP3-201ENST00000514909 LRRN4Q8WUT4 740 aa13.2□□□□□ -0.3
LDHBP3-201ENST00000514909 HLA-CQ95604 372 aa13.2□□□□□ -0.3
LDHBP3-201ENST00000514909 RABGEF1Q9UJ41 708 aa13.2□□□□□ -0.3
LDHBP3-201ENST00000514909 PLA2G2EQ9NZK7 142 aa13.18□□□□□ -0.3
LDHBP3-201ENST00000514909 PALM3A6NDB9 673 aaPredicted RBP13.17□□□□□ -0.3
LDHBP3-201ENST00000514909 HDGFP51858 240 aaKnown RBP13.17□□□□□ -0.3
LDHBP3-201ENST00000514909 MFAP1P55081 439 aaKnown RBP13.17□□□□□ -0.3
LDHBP3-201ENST00000514909 SLF2Q8IX21 1173 aa13.17□□□□□ -0.3
LDHBP3-201ENST00000514909 C6orf229H3BNL8 230 aa13.16□□□□□ -0.3
LDHBP3-201ENST00000514909 RFX1P22670 979 aa13.16□□□□□ -0.3
LDHBP3-201ENST00000514909 UCN2Q96RP3 112 aa13.15□□□□□ -0.3
LDHBP3-201ENST00000514909 FUT2Q10981 343 aa13.14□□□□□ -0.31
LDHBP3-201ENST00000514909 FAM98CQ17RN3 349 aaKnown RBP13.14□□□□□ -0.31
LDHBP3-201ENST00000514909 TSC1Q92574 1164 aa13.14□□□□□ -0.31
LDHBP3-201ENST00000514909 ATP6V1AP38606 617 aa13.13□□□□□ -0.31
LDHBP3-201ENST00000514909 VPS9D1Q9Y2B5 631 aa13.13□□□□□ -0.31
LDHBP3-201ENST00000514909 ATG7O95352 703 aa13.12□□□□□ -0.31
LDHBP3-201ENST00000514909 PNMA1Q8ND90 353 aa13.12□□□□□ -0.31
LDHBP3-201ENST00000514909 EPS8L1Q8TE68 723 aa13.12□□□□□ -0.31
LDHBP3-201ENST00000514909 CFHP08603 1231 aa13.11□□□□□ -0.31
LDHBP3-201ENST00000514909 DESI1Q6ICB0 168 aa13.11□□□□□ -0.31
LDHBP3-201ENST00000514909 PRR7Q8TB68 274 aa13.11□□□□□ -0.31
LDHBP3-201ENST00000514909 KCTD12Q96CX2 325 aaKnown RBP13.11□□□□□ -0.31
LDHBP3-201ENST00000514909 LMOD1P29536 600 aaPredicted RBP13.1□□□□□ -0.31
LDHBP3-201ENST00000514909 TFIP11Q9UBB9 837 aaKnown RBP13.1□□□□□ -0.31
LDHBP3-201ENST00000514909 SEPT9Q9UHD8 586 aaPredicted RBP13.1□□□□□ -0.31
LDHBP3-201ENST00000514909 MTMR7Q9Y216 660 aa13.1□□□□□ -0.31
LDHBP3-201ENST00000514909 LAPTM4BQ86VI4 370 aa13.09□□□□□ -0.31
LDHBP3-201ENST00000514909 RETREG3Q86VR2 466 aa13.09□□□□□ -0.31
LDHBP3-201ENST00000514909 MAFBQ9Y5Q3 323 aaPredicted RBP13.09□□□□□ -0.31
LDHBP3-201ENST00000514909 SEMA3FQ13275 785 aa13.08□□□□□ -0.32
LDHBP3-201ENST00000514909 EIF4G2P78344 907 aaKnown RBP eCLIP13.07□□□□□ -0.32
LDHBP3-201ENST00000514909 NR6A1Q15406 480 aa13.07□□□□□ -0.32
LDHBP3-201ENST00000514909 KMT5BQ4FZB7 885 aa13.06□□□□□ -0.32
LDHBP3-201ENST00000514909 TMEM88BA6NKF7 163 aa13.05□□□□□ -0.32
LDHBP3-201ENST00000514909 BHMG1C9JSJ3 638 aaPredicted RBP13.04□□□□□ -0.32
LDHBP3-201ENST00000514909 Q3C1V9 767 aa13.04□□□□□ -0.32
LDHBP3-201ENST00000514909 SAMD7Q7Z3H4 446 aa13.04□□□□□ -0.32
LDHBP3-201ENST00000514909 PER1O15534 1290 aaPredicted RBP13.03□□□□□ -0.32
LDHBP3-201ENST00000514909 ATP9BO43861 1147 aa13.03□□□□□ -0.32
LDHBP3-201ENST00000514909 MORN1Q5T089 497 aa13.03□□□□□ -0.32
LDHBP3-201ENST00000514909 SYMPKQ92797 1274 aaKnown RBP13.03□□□□□ -0.32
LDHBP3-201ENST00000514909 VRTNQ9H8Y1 702 aa13.03□□□□□ -0.32
LDHBP3-201ENST00000514909 NR1H3Q13133 447 aa13.02□□□□□ -0.33
LDHBP3-201ENST00000514909 STAC3Q96MF2 364 aa13.02□□□□□ -0.33
LDHBP3-201ENST00000514909 LYPD8Q6UX82 237 aa13.01□□□□□ -0.33
LDHBP3-201ENST00000514909 NFATC2IPQ8NCF5 419 aa13.01□□□□□ -0.33
LDHBP3-201ENST00000514909 ELOAQ14241 798 aaKnown RBP13□□□□□ -0.33
LDHBP3-201ENST00000514909 TBC1D9Q6ZT07 1266 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms