RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 TREML4Q6UXN2 200 aa11.19□□□□□ -0.62
NEDD4-211ENST00000514893 KDM4AO75164 1064 aa11.18□□□□□ -0.62
NEDD4-211ENST00000514893 CD46P15529 392 aa11.18□□□□□ -0.62
NEDD4-211ENST00000514893 SMCPP49901 116 aaPredicted RBP11.18□□□□□ -0.62
NEDD4-211ENST00000514893 WNT7AO00755 349 aa11.17□□□□□ -0.62
NEDD4-211ENST00000514893 MMP16P51512 607 aa11.17□□□□□ -0.62
NEDD4-211ENST00000514893 USP46P62068 366 aa11.17□□□□□ -0.62
NEDD4-211ENST00000514893 MAP2K5Q13163 448 aa11.17□□□□□ -0.62
NEDD4-211ENST00000514893 SNIP1Q8TAD8 396 aaKnown RBP11.17□□□□□ -0.62
NEDD4-211ENST00000514893 USB1Q9BQ65 265 aaKnown RBP11.17□□□□□ -0.62
NEDD4-211ENST00000514893 HAP1P54257 671 aaPredicted RBP11.16□□□□□ -0.62
NEDD4-211ENST00000514893 C11orf95C9JLR9 678 aaPredicted RBP11.15□□□□□ -0.62
NEDD4-211ENST00000514893 IRF6O14896 467 aa11.15□□□□□ -0.62
NEDD4-211ENST00000514893 TRIM32Q13049 653 aa11.14□□□□□ -0.63
NEDD4-211ENST00000514893 DACH1Q9UI36 760 aa11.14□□□□□ -0.63
NEDD4-211ENST00000514893 GMPR2Q9P2T1 348 aaKnown RBP11.13□□□□□ -0.63
NEDD4-211ENST00000514893 MINK1Q8N4C8 1332 aaPredicted RBP11.12□□□□□ -0.63
NEDD4-211ENST00000514893 DXOO77932 396 aaKnown RBP11.11□□□□□ -0.63
NEDD4-211ENST00000514893 REPIN1Q9BWE0 567 aaKnown RBP11.11□□□□□ -0.63
NEDD4-211ENST00000514893 MDM2Q00987 491 aaPredicted RBP11.1□□□□□ -0.63
NEDD4-211ENST00000514893 SMPD1P17405 629 aa11.09□□□□□ -0.63
NEDD4-211ENST00000514893 CCDC24Q8N4L8 307 aa11.09□□□□□ -0.63
NEDD4-211ENST00000514893 MRGPRX2Q96LB1 330 aa11.09□□□□□ -0.63
NEDD4-211ENST00000514893 KDM2AQ9Y2K7 1162 aa11.09□□□□□ -0.63
NEDD4-211ENST00000514893 LCE2AQ5TA79 106 aaPredicted RBP11.07□□□□□ -0.64
NEDD4-211ENST00000514893 WFS1O76024 890 aa11.06□□□□□ -0.64
NEDD4-211ENST00000514893 KRI1Q8N9T8 703 aaKnown RBP11.06□□□□□ -0.64
NEDD4-211ENST00000514893 CLCN1P35523 988 aa11.05□□□□□ -0.64
NEDD4-211ENST00000514893 WNT7BP56706 349 aa11.05□□□□□ -0.64
NEDD4-211ENST00000514893 RC3H1Q5TC82 1133 aaKnown RBP11.05□□□□□ -0.64
NEDD4-211ENST00000514893 SENP2Q9HC62 589 aa11.05□□□□□ -0.64
NEDD4-211ENST00000514893 HOXA2O43364 376 aa11.04□□□□□ -0.64
NEDD4-211ENST00000514893 GPCPD1Q9NPB8 672 aa11.04□□□□□ -0.64
NEDD4-211ENST00000514893 ATP13A2Q9NQ11 1180 aa11.04□□□□□ -0.64
NEDD4-211ENST00000514893 J3QL48 77 aa11.03□□□□□ -0.64
NEDD4-211ENST00000514893 NUTM1Q86Y26 1132 aa11.03□□□□□ -0.64
NEDD4-211ENST00000514893 VSIG10Q8N0Z9 540 aa11.01□□□□□ -0.65
NEDD4-211ENST00000514893 HLA-CQ95604 372 aa11.01□□□□□ -0.65
NEDD4-211ENST00000514893 JUNDP17535 347 aa11□□□□□ -0.65
NEDD4-211ENST00000514893 CCDC102AQ96A19 550 aa11□□□□□ -0.65
NEDD4-211ENST00000514893 FAM217BQ9NTX9 383 aaPredicted RBP11□□□□□ -0.65
NEDD4-211ENST00000514893 HPS1Q92902 700 aa10.99□□□□□ -0.65
NEDD4-211ENST00000514893 KIFC2Q96AC6 838 aa10.99□□□□□ -0.65
NEDD4-211ENST00000514893 SKOR1P84550 965 aa10.98□□□□□ -0.65
NEDD4-211ENST00000514893 RETREG3Q86VR2 466 aa10.98□□□□□ -0.65
NEDD4-211ENST00000514893 TRIM47Q96LD4 638 aa10.98□□□□□ -0.65
NEDD4-211ENST00000514893 SNRPBP14678 240 aaKnown RBP10.97□□□□□ -0.65
NEDD4-211ENST00000514893 NFX1Q12986 1120 aaKnown RBP10.97□□□□□ -0.65
NEDD4-211ENST00000514893 SYMPKQ92797 1274 aaKnown RBP10.96□□□□□ -0.65
NEDD4-211ENST00000514893 NUDT12Q9BQG2 462 aa10.96□□□□□ -0.65
NEDD4-211ENST00000514893 ALDH1A1P00352 501 aa10.95□□□□□ -0.66
NEDD4-211ENST00000514893 INSM1Q01101 510 aaPredicted RBP10.95□□□□□ -0.66
NEDD4-211ENST00000514893 GUCA2AQ02747 115 aa10.95□□□□□ -0.66
NEDD4-211ENST00000514893 WIPF1O43516 503 aa10.94□□□□□ -0.66
NEDD4-211ENST00000514893 FDX1P10109 184 aa10.94□□□□□ -0.66
NEDD4-211ENST00000514893 TERTO14746 1132 aaKnown RBP10.93□□□□□ -0.66
NEDD4-211ENST00000514893 EHBP1Q8NDI1 1231 aa10.93□□□□□ -0.66
NEDD4-211ENST00000514893 C6orf229H3BNL8 230 aa10.92□□□□□ -0.66
NEDD4-211ENST00000514893 STK17AQ9UEE5 414 aa10.92□□□□□ -0.66
NEDD4-211ENST00000514893 PTCRAQ6ISU1 281 aaPredicted RBP10.91□□□□□ -0.66
NEDD4-211ENST00000514893 WASF2Q9Y6W5 498 aa10.91□□□□□ -0.66
NEDD4-211ENST00000514893 SIAH2O43255 324 aa10.9□□□□□ -0.66
NEDD4-211ENST00000514893 MS4A1P11836 297 aa10.9□□□□□ -0.66
NEDD4-211ENST00000514893 SSTR3P32745 418 aaPredicted RBP10.9□□□□□ -0.66
NEDD4-211ENST00000514893 CCNYL3P0C7X3 344 aa10.89□□□□□ -0.67
NEDD4-211ENST00000514893 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.88□□□□□ -0.67
NEDD4-211ENST00000514893 SLC16A10Q8TF71 515 aa10.88□□□□□ -0.67
NEDD4-211ENST00000514893 PCDHGC3Q9UN70 934 aa10.88□□□□□ -0.67
NEDD4-211ENST00000514893 EVA1BQ9NVM1 165 aa10.87□□□□□ -0.67
NEDD4-211ENST00000514893 CAPN5O15484 640 aaPredicted RBP10.86□□□□□ -0.67
NEDD4-211ENST00000514893 SPIRE2Q8WWL2 714 aa10.86□□□□□ -0.67
NEDD4-211ENST00000514893 SPDYE5A6NIY4 337 aa10.85□□□□□ -0.67
NEDD4-211ENST00000514893 SH3BP2P78314 561 aa10.85□□□□□ -0.67
NEDD4-211ENST00000514893 PTPRNQ16849 979 aa10.85□□□□□ -0.67
NEDD4-211ENST00000514893 PLEKHG3A1L390 1219 aa10.83□□□□□ -0.68
NEDD4-211ENST00000514893 NDUFV2P19404 249 aa10.82□□□□□ -0.68
NEDD4-211ENST00000514893 KCNH2Q12809 1159 aa10.82□□□□□ -0.68
NEDD4-211ENST00000514893 TTLL12Q14166 644 aaPredicted RBP10.82□□□□□ -0.68
NEDD4-211ENST00000514893 DESI1Q6ICB0 168 aa10.82□□□□□ -0.68
NEDD4-211ENST00000514893 UNC93B1Q9H1C4 597 aa10.82□□□□□ -0.68
NEDD4-211ENST00000514893 NXF1Q9UBU9 619 aaKnown RBP10.82□□□□□ -0.68
NEDD4-211ENST00000514893 MOXD2PA6NHM9 499 aa10.81□□□□□ -0.68
NEDD4-211ENST00000514893 MTMR2Q13614 643 aa10.81□□□□□ -0.68
NEDD4-211ENST00000514893 NPAS3Q8IXF0 933 aa10.81□□□□□ -0.68
NEDD4-211ENST00000514893 PRR7Q8TB68 274 aa10.81□□□□□ -0.68
NEDD4-211ENST00000514893 BAP1Q92560 729 aa10.81□□□□□ -0.68
NEDD4-211ENST00000514893 VARSP26640 1264 aaKnown RBP10.8□□□□□ -0.68
NEDD4-211ENST00000514893 DIXDC1Q155Q3 683 aa10.8□□□□□ -0.68
NEDD4-211ENST00000514893 BARGINQ6ZT62 677 aa10.8□□□□□ -0.68
NEDD4-211ENST00000514893 MPNDQ8N594 471 aa10.79□□□□□ -0.68
NEDD4-211ENST00000514893 FAM181BA6NEQ2 426 aa10.78□□□□□ -0.68
NEDD4-211ENST00000514893 GJA5P36382 358 aa10.78□□□□□ -0.68
NEDD4-211ENST00000514893 AMHR2Q16671 573 aa10.78□□□□□ -0.68
NEDD4-211ENST00000514893 TRIM46Q7Z4K8 759 aa10.78□□□□□ -0.68
NEDD4-211ENST00000514893 ZNF511Q8NB15 262 aa10.77□□□□□ -0.69
NEDD4-211ENST00000514893 ZMYND10O75800 440 aa10.76□□□□□ -0.69
NEDD4-211ENST00000514893 BMP1P13497 986 aa10.76□□□□□ -0.69
NEDD4-211ENST00000514893 LINC01559Q495D7 138 aa10.76□□□□□ -0.69
NEDD4-211ENST00000514893 IRF7Q92985 503 aa10.76□□□□□ -0.69
NEDD4-211ENST00000514893 BEGAINQ9BUH8 593 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms