RNA–Protein interactions for RNA: ENST00000514677.5

SLC41A3-221, Transcript of solute carrier family 41 member 3, humanhuman

TSL 1 (best)

Gene SLC41A3, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC41A3-221ENST00000514677 TRPM1Q7Z4N2 1603 aa23.73■■□□□ 1.39
SLC41A3-221ENST00000514677 NALCNQ8IZF0 1738 aa23.73■■□□□ 1.39
SLC41A3-221ENST00000514677 PLEKHH1Q9ULM0 1364 aa23.72■■□□□ 1.39
SLC41A3-221ENST00000514677 SCAF1Q9H7N4 1312 aaKnown RBP23.71■■□□□ 1.39
SLC41A3-221ENST00000514677 ATF3P18847 181 aa23.71■■□□□ 1.39
SLC41A3-221ENST00000514677 PRAM1Q96QH2 718 aa23.7■■□□□ 1.38
SLC41A3-221ENST00000514677 GPRASP1Q5JY77 1395 aa23.69■■□□□ 1.38
SLC41A3-221ENST00000514677 SLAIN2Q9P270 581 aa23.69■■□□□ 1.38
SLC41A3-221ENST00000514677 ROCK2O75116 1388 aaKnown RBP23.68■■□□□ 1.38
SLC41A3-221ENST00000514677 POGKQ9P215 609 aa23.68■■□□□ 1.38
SLC41A3-221ENST00000514677 RALGAPBQ86X10 1494 aa23.67■■□□□ 1.38
SLC41A3-221ENST00000514677 ROBO1Q9Y6N7 1651 aa23.65■■□□□ 1.38
SLC41A3-221ENST00000514677 ARHGEF28Q8N1W1 1705 aaKnown RBP23.64■■□□□ 1.38
SLC41A3-221ENST00000514677 CDC42BPGQ6DT37 1551 aa23.62■■□□□ 1.37
SLC41A3-221ENST00000514677 MST1RQ04912 1400 aa23.62■■□□□ 1.37
SLC41A3-221ENST00000514677 SAFB2Q14151 953 aaKnown RBP eCLIP23.61■■□□□ 1.37
SLC41A3-221ENST00000514677 HSPA1LP34931 641 aa23.6■■□□□ 1.37
SLC41A3-221ENST00000514677 CARD11Q9BXL7 1154 aa23.6■■□□□ 1.37
SLC41A3-221ENST00000514677 ADGRB2O60241 1585 aa23.57■■□□□ 1.36
SLC41A3-221ENST00000514677 MINK1Q8N4C8 1332 aaPredicted RBP23.57■■□□□ 1.36
SLC41A3-221ENST00000514677 CENPJQ9HC77 1338 aaPredicted RBP23.57■■□□□ 1.36
SLC41A3-221ENST00000514677 C1orf167Q5SNV9 1468 aa23.56■■□□□ 1.36
SLC41A3-221ENST00000514677 EIF3AQ14152 1382 aaKnown RBP23.54■■□□□ 1.36
SLC41A3-221ENST00000514677 BRINP3Q76B58 766 aa23.54■■□□□ 1.36
SLC41A3-221ENST00000514677 WASLO00401 505 aaPredicted RBP23.53■■□□□ 1.36
SLC41A3-221ENST00000514677 HIRIP3Q9BW71 556 aaPredicted RBP23.53■■□□□ 1.36
SLC41A3-221ENST00000514677 FMN2Q9NZ56 1722 aa23.53■■□□□ 1.36
SLC41A3-221ENST00000514677 MED1Q15648 1581 aaPredicted RBP23.5■■□□□ 1.35
SLC41A3-221ENST00000514677 PHLPP1O60346 1717 aa23.5■■□□□ 1.35
SLC41A3-221ENST00000514677 ANKARQ7Z5J8 1434 aa23.49■■□□□ 1.35
SLC41A3-221ENST00000514677 AHDC1Q5TGY3 1603 aaPredicted RBP23.48■■□□□ 1.35
SLC41A3-221ENST00000514677 ORAI2Q96SN7 254 aa23.48■■□□□ 1.35
SLC41A3-221ENST00000514677 QRICH2Q9H0J4 1663 aa23.48■■□□□ 1.35
SLC41A3-221ENST00000514677 CDK19Q9BWU1 502 aa23.47■■□□□ 1.35
SLC41A3-221ENST00000514677 SBNO2Q9Y2G9 1366 aa23.47■■□□□ 1.35
SLC41A3-221ENST00000514677 NUTM2FA1L443 756 aa23.46■■□□□ 1.35
SLC41A3-221ENST00000514677 ESCO1Q5FWF5 840 aa23.46■■□□□ 1.35
SLC41A3-221ENST00000514677 NHSL1Q5SYE7 1610 aa23.46■■□□□ 1.35
SLC41A3-221ENST00000514677 COL16A1Q07092 1604 aaPredicted RBP23.45■■□□□ 1.34
SLC41A3-221ENST00000514677 TULP4Q9NRJ4 1543 aa23.45■■□□□ 1.34
SLC41A3-221ENST00000514677 EVC2Q86UK5 1308 aa23.42■■□□□ 1.34
SLC41A3-221ENST00000514677 PRR36Q9H6K5 1346 aa23.42■■□□□ 1.34
SLC41A3-221ENST00000514677 USP32Q8NFA0 1604 aa23.42■■□□□ 1.34
SLC41A3-221ENST00000514677 USP47Q96K76 1375 aa23.41■■□□□ 1.34
SLC41A3-221ENST00000514677 ST20-MTHFSA0A0A6YYL1 179 aa23.41■■□□□ 1.34
SLC41A3-221ENST00000514677 NUDT16Q96DE0 195 aaKnown RBP23.41■■□□□ 1.34
SLC41A3-221ENST00000514677 RGPD8O14715 1765 aaPredicted RBP23.41■■□□□ 1.34
SLC41A3-221ENST00000514677 SLC24A1O60721 1099 aa23.4■■□□□ 1.34
SLC41A3-221ENST00000514677 PHF8Q9UPP1 1060 aa23.4■■□□□ 1.34
SLC41A3-221ENST00000514677 TESK2Q96S53 571 aa23.39■■□□□ 1.33
SLC41A3-221ENST00000514677 ATP7BP35670 1465 aa23.38■■□□□ 1.33
SLC41A3-221ENST00000514677 CCDC61Q9Y6R9 512 aa23.38■■□□□ 1.33
SLC41A3-221ENST00000514677 KIF1AQ12756 1690 aa23.38■■□□□ 1.33
SLC41A3-221ENST00000514677 NPHP3Q7Z494 1330 aa23.37■■□□□ 1.33
SLC41A3-221ENST00000514677 SRPK2P78362 688 aaKnown RBP23.37■■□□□ 1.33
SLC41A3-221ENST00000514677 DDX17Q92841 729 aaKnown RBP23.37■■□□□ 1.33
SLC41A3-221ENST00000514677 SOS2Q07890 1332 aaPredicted RBP23.36■■□□□ 1.33
SLC41A3-221ENST00000514677 FOXO3O43524 673 aa23.36■■□□□ 1.33
SLC41A3-221ENST00000514677 CABP2Q9NPB3 220 aa23.36■■□□□ 1.33
SLC41A3-221ENST00000514677 PLEKHG3A1L390 1219 aa23.34■■□□□ 1.33
SLC41A3-221ENST00000514677 PUS7Q96PZ0 661 aaKnown RBP23.34■■□□□ 1.33
SLC41A3-221ENST00000514677 JCADQ9P266 1359 aa23.33■■□□□ 1.33
SLC41A3-221ENST00000514677 LRRC59Q96AG4 307 aaKnown RBP23.33■■□□□ 1.33
SLC41A3-221ENST00000514677 ITSN1Q15811 1721 aa23.33■■□□□ 1.32
SLC41A3-221ENST00000514677 SHPRHQ149N8 1683 aa23.32■■□□□ 1.32
SLC41A3-221ENST00000514677 PMFBP1Q8TBY8 1022 aa23.32■■□□□ 1.32
SLC41A3-221ENST00000514677 PXDNQ92626 1479 aa23.31■■□□□ 1.32
SLC41A3-221ENST00000514677 EIF4G2P78344 907 aaKnown RBP eCLIP23.31■■□□□ 1.32
SLC41A3-221ENST00000514677 TOPAZ1Q8N9V7 1692 aa23.31■■□□□ 1.32
SLC41A3-221ENST00000514677 ATAD2Q6PL18 1390 aa23.29■■□□□ 1.32
SLC41A3-221ENST00000514677 KRT28Q7Z3Y7 464 aa23.29■■□□□ 1.32
SLC41A3-221ENST00000514677 POLR3AO14802 1390 aaPredicted RBP23.28■■□□□ 1.32
SLC41A3-221ENST00000514677 PSME1Q06323 249 aa23.28■■□□□ 1.32
SLC41A3-221ENST00000514677 NGDNQ8NEJ9 315 aaKnown RBP23.28■■□□□ 1.32
SLC41A3-221ENST00000514677 PPIP5K1Q6PFW1 1433 aa23.27■■□□□ 1.32
SLC41A3-221ENST00000514677 TMF1P82094 1093 aa23.26■■□□□ 1.31
SLC41A3-221ENST00000514677 XPCQ01831 940 aaPredicted RBP23.26■■□□□ 1.31
SLC41A3-221ENST00000514677 CABP1Q9NZU7 370 aa23.26■■□□□ 1.31
SLC41A3-221ENST00000514677 SBNO1A3KN83 1393 aa23.26■■□□□ 1.31
SLC41A3-221ENST00000514677 HSPA5P11021 654 aaKnown RBP23.25■■□□□ 1.31
SLC41A3-221ENST00000514677 ACEP12821 1306 aa23.25■■□□□ 1.31
SLC41A3-221ENST00000514677 SPATA31A6Q5VVP1 1343 aa23.23■■□□□ 1.31
SLC41A3-221ENST00000514677 SPATA31A3Q5VYP0 1347 aa23.23■■□□□ 1.31
SLC41A3-221ENST00000514677 PNPLA6Q8IY17 1366 aa23.23■■□□□ 1.31
SLC41A3-221ENST00000514677 CDCA8Q53HL2 280 aa23.22■■□□□ 1.31
SLC41A3-221ENST00000514677 BRD4O60885 1362 aaPredicted RBP23.19■■□□□ 1.3
SLC41A3-221ENST00000514677 ZNF692Q9BU19 519 aaPredicted RBP23.19■■□□□ 1.3
SLC41A3-221ENST00000514677 TRPM3Q9HCF6 1732 aaPredicted RBP23.19■■□□□ 1.3
SLC41A3-221ENST00000514677 LRP6O75581 1613 aa23.19■■□□□ 1.3
SLC41A3-221ENST00000514677 COL22A1Q8NFW1 1626 aaPredicted RBP23.19■■□□□ 1.3
SLC41A3-221ENST00000514677 TNS3Q68CZ2 1445 aa23.18■■□□□ 1.3
SLC41A3-221ENST00000514677 NINLQ9Y2I6 1382 aa23.18■■□□□ 1.3
SLC41A3-221ENST00000514677 CPSF1Q10570 1443 aaKnown RBP23.16■■□□□ 1.3
SLC41A3-221ENST00000514677 ARHGEF10O15013 1369 aa23.16■■□□□ 1.3
SLC41A3-221ENST00000514677 SLC12A5Q9H2X9 1139 aa23.16■■□□□ 1.3
SLC41A3-221ENST00000514677 TMC1Q8TDI8 760 aa23.14■■□□□ 1.29
SLC41A3-221ENST00000514677 USP6P35125 1406 aa23.14■■□□□ 1.29
SLC41A3-221ENST00000514677 ZEB1P37275 1124 aaPredicted RBP23.13■■□□□ 1.29
SLC41A3-221ENST00000514677 PHF23Q9BUL5 403 aaPredicted RBP23.13■■□□□ 1.29
SLC41A3-221ENST00000514677 SSH2Q76I76 1423 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms