RNA–Protein interactions for RNA: ENST00000514415.1

HOXC10-204, Transcript of homeobox C10, humanhuman

TSL 3

Gene HOXC10, Length 550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10-204ENST00000514415 SALL2Q9Y467 1007 aaPredicted RBP16.15■□□□□ 0.18
HOXC10-204ENST00000514415 VIRMAQ69YN4 1812 aaKnown RBP16.15■□□□□ 0.18
HOXC10-204ENST00000514415 ANKRD36BQ8N2N9 1353 aa16.14■□□□□ 0.17
HOXC10-204ENST00000514415 E9PSI1 815 aa16.14■□□□□ 0.17
HOXC10-204ENST00000514415 ANP32AP39687 249 aaKnown RBP16.14■□□□□ 0.17
HOXC10-204ENST00000514415 MED14O60244 1454 aa16.14■□□□□ 0.17
HOXC10-204ENST00000514415 CGNL1Q0VF96 1302 aa16.14■□□□□ 0.17
HOXC10-204ENST00000514415 DIP2BQ9P265 1576 aa16.13■□□□□ 0.17
HOXC10-204ENST00000514415 CHGAP10645 457 aaKnown RBP16.13■□□□□ 0.17
HOXC10-204ENST00000514415 KIF20BQ96Q89 1820 aa16.12■□□□□ 0.17
HOXC10-204ENST00000514415 IQSEC2Q5JU85 1478 aa16.11■□□□□ 0.17
HOXC10-204ENST00000514415 ADGRB2O60241 1585 aa16.11■□□□□ 0.17
HOXC10-204ENST00000514415 DLC1Q96QB1 1528 aa16.1■□□□□ 0.17
HOXC10-204ENST00000514415 AAMPQ13685 434 aa16.1■□□□□ 0.17
HOXC10-204ENST00000514415 CRBNQ96SW2 442 aa16.1■□□□□ 0.17
HOXC10-204ENST00000514415 CENPQQ7L2Z9 268 aaPredicted RBP16.09■□□□□ 0.17
HOXC10-204ENST00000514415 MORC1Q86VD1 984 aa16.09■□□□□ 0.17
HOXC10-204ENST00000514415 CFAP53Q96M91 514 aa16.09■□□□□ 0.17
HOXC10-204ENST00000514415 IPO9Q96P70 1041 aaKnown RBP16.09■□□□□ 0.17
HOXC10-204ENST00000514415 TRAK1Q9UPV9 953 aa16.09■□□□□ 0.17
HOXC10-204ENST00000514415 CCDC27Q2M243 656 aa16.08■□□□□ 0.16
HOXC10-204ENST00000514415 NOP58Q9Y2X3 529 aaKnown RBP16.08■□□□□ 0.16
HOXC10-204ENST00000514415 ATAD2Q6PL18 1390 aa16.08■□□□□ 0.16
HOXC10-204ENST00000514415 PTPRMP28827 1452 aa16.08■□□□□ 0.16
HOXC10-204ENST00000514415 SPATA31D1Q6ZQQ2 1576 aa16.08■□□□□ 0.16
HOXC10-204ENST00000514415 SETD1AO15047 1707 aaKnown RBP16.08■□□□□ 0.16
HOXC10-204ENST00000514415 RUNDC1Q96C34 613 aa16.07■□□□□ 0.16
HOXC10-204ENST00000514415 KDM2BQ8NHM5 1336 aa16.07■□□□□ 0.16
HOXC10-204ENST00000514415 YEATS2Q9ULM3 1422 aa16.07■□□□□ 0.16
HOXC10-204ENST00000514415 RIMBP3CA6NJZ7 1639 aa16.07■□□□□ 0.16
HOXC10-204ENST00000514415 RIMBP3BA6NNM3 1639 aa16.07■□□□□ 0.16
HOXC10-204ENST00000514415 RIMBP3Q9UFD9 1639 aa16.07■□□□□ 0.16
HOXC10-204ENST00000514415 ALKQ9UM73 1620 aa16.06■□□□□ 0.16
HOXC10-204ENST00000514415 SENP3-EIF4A1A0A087X0R7 540 aa16.06■□□□□ 0.16
HOXC10-204ENST00000514415 APAF1O14727 1248 aa16.06■□□□□ 0.16
HOXC10-204ENST00000514415 RAPGEF3O95398 923 aa16.06■□□□□ 0.16
HOXC10-204ENST00000514415 WDR63Q8IWG1 891 aa16.06■□□□□ 0.16
HOXC10-204ENST00000514415 BACH2Q9BYV9 841 aa16.06■□□□□ 0.16
HOXC10-204ENST00000514415 KNDC1Q76NI1 1749 aa16.05■□□□□ 0.16
HOXC10-204ENST00000514415 ABCC11Q96J66 1382 aa16.05■□□□□ 0.16
HOXC10-204ENST00000514415 IDI1Q13907 227 aa16.05■□□□□ 0.16
HOXC10-204ENST00000514415 PDE3AQ14432 1141 aa16.05■□□□□ 0.16
HOXC10-204ENST00000514415 PDE4AP27815 886 aa16.04■□□□□ 0.16
HOXC10-204ENST00000514415 SLC12A5Q9H2X9 1139 aa16.03■□□□□ 0.16
HOXC10-204ENST00000514415 YTHDC2Q9H6S0 1430 aaKnown RBP16.02■□□□□ 0.16
HOXC10-204ENST00000514415 TSPOAP1O95153 1857 aa16.02■□□□□ 0.16
HOXC10-204ENST00000514415 PLIN1O60240 522 aa16.02■□□□□ 0.16
HOXC10-204ENST00000514415 CDC42BPGQ6DT37 1551 aa16.01■□□□□ 0.15
HOXC10-204ENST00000514415 TMEM132EQ6IEE7 984 aa16.01■□□□□ 0.15
HOXC10-204ENST00000514415 WWC1Q8IX03 1113 aa16.01■□□□□ 0.15
HOXC10-204ENST00000514415 CT47B1P0C2W7 299 aaPredicted RBP16■□□□□ 0.15
HOXC10-204ENST00000514415 CCDC146Q8IYE0 955 aa16■□□□□ 0.15
HOXC10-204ENST00000514415 ZBTB47Q9UFB7 747 aaPredicted RBP16■□□□□ 0.15
HOXC10-204ENST00000514415 ARHGEF40Q8TER5 1519 aa15.99■□□□□ 0.15
HOXC10-204ENST00000514415 COL3A1P02461 1466 aaPredicted RBP15.98■□□□□ 0.15
HOXC10-204ENST00000514415 DDRGK1Q96HY6 314 aa15.98■□□□□ 0.15
HOXC10-204ENST00000514415 TERF2IPQ9NYB0 399 aa15.98■□□□□ 0.15
HOXC10-204ENST00000514415 ZMYM3Q14202 1370 aa15.98■□□□□ 0.15
HOXC10-204ENST00000514415 ATP7BP35670 1465 aa15.97■□□□□ 0.15
HOXC10-204ENST00000514415 PNNQ9H307 717 aaKnown RBP15.97■□□□□ 0.15
HOXC10-204ENST00000514415 KIF13AQ9H1H9 1805 aa15.96■□□□□ 0.15
HOXC10-204ENST00000514415 MTHFSP49914 203 aa15.96■□□□□ 0.15
HOXC10-204ENST00000514415 C20orf194Q5TEA3 1177 aa15.96■□□□□ 0.15
HOXC10-204ENST00000514415 A2ML1A8K2U0 1454 aa15.96■□□□□ 0.14
HOXC10-204ENST00000514415 A0A1W2PP64 1363 aa15.95■□□□□ 0.14
HOXC10-204ENST00000514415 NLRP1Q9C000 1473 aa15.95■□□□□ 0.14
HOXC10-204ENST00000514415 CD163L1Q9NR16 1453 aa15.95■□□□□ 0.14
HOXC10-204ENST00000514415 TCP11L2Q8N4U5 519 aa15.94■□□□□ 0.14
HOXC10-204ENST00000514415 MYH16Q9H6N6 1097 aa15.94■□□□□ 0.14
HOXC10-204ENST00000514415 SPINK5Q9NQ38 1064 aaPredicted RBP15.94■□□□□ 0.14
HOXC10-204ENST00000514415 AKAP12Q02952 1782 aa15.94■□□□□ 0.14
HOXC10-204ENST00000514415 MAP2P11137 1827 aaKnown RBP15.94■□□□□ 0.14
HOXC10-204ENST00000514415 MON2Q7Z3U7 1717 aa15.93■□□□□ 0.14
HOXC10-204ENST00000514415 NRXN3Q9Y4C0 1643 aa15.93■□□□□ 0.14
HOXC10-204ENST00000514415 IL16Q14005 1332 aa15.93■□□□□ 0.14
HOXC10-204ENST00000514415 ITSN1Q15811 1721 aa15.92■□□□□ 0.14
HOXC10-204ENST00000514415 HDGFL2Q7Z4V5 671 aaPredicted RBP15.92■□□□□ 0.14
HOXC10-204ENST00000514415 PNPLA6Q8IY17 1366 aa15.91■□□□□ 0.14
HOXC10-204ENST00000514415 FAM161AQ3B820 660 aa15.91■□□□□ 0.14
HOXC10-204ENST00000514415 SIRT1Q96EB6 747 aa15.91■□□□□ 0.14
HOXC10-204ENST00000514415 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.9■□□□□ 0.14
HOXC10-204ENST00000514415 CABP2Q9NPB3 220 aa15.9■□□□□ 0.14
HOXC10-204ENST00000514415 RIMS2Q9UQ26 1411 aa15.9■□□□□ 0.14
HOXC10-204ENST00000514415 RARSP54136 660 aaKnown RBP15.89■□□□□ 0.13
HOXC10-204ENST00000514415 SRPK2P78362 688 aaKnown RBP15.89■□□□□ 0.13
HOXC10-204ENST00000514415 FAM69CQ0P6D2 419 aa15.89■□□□□ 0.13
HOXC10-204ENST00000514415 PMFBP1Q8TBY8 1022 aa15.89■□□□□ 0.13
HOXC10-204ENST00000514415 POGKQ9P215 609 aa15.89■□□□□ 0.13
HOXC10-204ENST00000514415 MAPK8IP3Q9UPT6 1336 aa15.89■□□□□ 0.13
HOXC10-204ENST00000514415 CPS1P31327 1500 aa15.89■□□□□ 0.13
HOXC10-204ENST00000514415 BCAR3O75815 825 aa15.88■□□□□ 0.13
HOXC10-204ENST00000514415 TECPR2O15040 1411 aa15.87■□□□□ 0.13
HOXC10-204ENST00000514415 FAM135BQ49AJ0 1406 aa15.87■□□□□ 0.13
HOXC10-204ENST00000514415 PAK3O75914 559 aaPredicted RBP15.87■□□□□ 0.13
HOXC10-204ENST00000514415 CLUAP1Q96AJ1 413 aa15.87■□□□□ 0.13
HOXC10-204ENST00000514415 PRAM1Q96QH2 718 aa15.87■□□□□ 0.13
HOXC10-204ENST00000514415 DMRT2Q9Y5R5 561 aa15.87■□□□□ 0.13
HOXC10-204ENST00000514415 HDGFP51858 240 aaKnown RBP15.86■□□□□ 0.13
HOXC10-204ENST00000514415 USP35Q9P2H5 1018 aa15.86■□□□□ 0.13
HOXC10-204ENST00000514415 UBR1Q8IWV7 1749 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms