RNA–Protein interactions for RNA: ENST00000514232.1

SMARCAD1-208, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 3

Gene SMARCAD1, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-208ENST00000514232 ADAMTS8Q9UP79 889 aa7.06□□□□□ -1.28
SMARCAD1-208ENST00000514232 LCE3BQ5TA77 95 aa7.05□□□□□ -1.28
SMARCAD1-208ENST00000514232 FOXK2Q01167 660 aa7.04□□□□□ -1.28
SMARCAD1-208ENST00000514232 TRIM32Q13049 653 aa7.04□□□□□ -1.28
SMARCAD1-208ENST00000514232 PRDM9Q9NQV7 894 aa7.03□□□□□ -1.28
SMARCAD1-208ENST00000514232 ZBTB24O43167 697 aaPredicted RBP7.02□□□□□ -1.29
SMARCAD1-208ENST00000514232 KRTAP4-12Q9BQ66 201 aa7.02□□□□□ -1.29
SMARCAD1-208ENST00000514232 REPIN1Q9BWE0 567 aaKnown RBP7.02□□□□□ -1.29
SMARCAD1-208ENST00000514232 KRTAP9-9Q9BYP9 154 aa7.01□□□□□ -1.29
SMARCAD1-208ENST00000514232 KRTAP9-4Q9BYQ2 154 aa7.01□□□□□ -1.29
SMARCAD1-208ENST00000514232 ZFP42Q96MM3 310 aa6.99□□□□□ -1.29
SMARCAD1-208ENST00000514232 RCCD1A6NED2 376 aa6.98□□□□□ -1.29
SMARCAD1-208ENST00000514232 CAPN5O15484 640 aaPredicted RBP6.98□□□□□ -1.29
SMARCAD1-208ENST00000514232 KRT76Q01546 638 aa6.98□□□□□ -1.29
SMARCAD1-208ENST00000514232 IRS1P35568 1242 aa6.97□□□□□ -1.29
SMARCAD1-208ENST00000514232 MORN1Q5T089 497 aa6.97□□□□□ -1.29
SMARCAD1-208ENST00000514232 Q8N3U1 123 aa6.97□□□□□ -1.29
SMARCAD1-208ENST00000514232 KRTAP4-8A0A0G2JLE6 195 aa6.96□□□□□ -1.3
SMARCAD1-208ENST00000514232 SKOR1P84550 965 aa6.96□□□□□ -1.3
SMARCAD1-208ENST00000514232 RBM46Q8TBY0 533 aaKnown RBP6.96□□□□□ -1.3
SMARCAD1-208ENST00000514232 ADGRG1Q9Y653 693 aa6.96□□□□□ -1.3
SMARCAD1-208ENST00000514232 RC3H1Q5TC82 1133 aaKnown RBP6.95□□□□□ -1.3
SMARCAD1-208ENST00000514232 ARIH1Q9Y4X5 557 aaPredicted RBP6.95□□□□□ -1.3
SMARCAD1-208ENST00000514232 FMNL1O95466 1100 aaPredicted RBP6.94□□□□□ -1.3
SMARCAD1-208ENST00000514232 MSS51Q4VC12 460 aa6.94□□□□□ -1.3
SMARCAD1-208ENST00000514232 KANK3Q6NY19 840 aa6.94□□□□□ -1.3
SMARCAD1-208ENST00000514232 ALDH1A1P00352 501 aa6.93□□□□□ -1.3
SMARCAD1-208ENST00000514232 ZNF385CQ66K41 422 aaPredicted RBP6.93□□□□□ -1.3
SMARCAD1-208ENST00000514232 SALL2Q9Y467 1007 aaPredicted RBP6.93□□□□□ -1.3
SMARCAD1-208ENST00000514232 SOBPA7XYQ1 873 aa6.92□□□□□ -1.3
SMARCAD1-208ENST00000514232 BRICD5Q6PL45 260 aa6.92□□□□□ -1.3
SMARCAD1-208ENST00000514232 ITGB2P05107 769 aa6.91□□□□□ -1.3
SMARCAD1-208ENST00000514232 SLC27A5Q9Y2P5 690 aa6.91□□□□□ -1.3
SMARCAD1-208ENST00000514232 SIAH2O43255 324 aa6.9□□□□□ -1.3
SMARCAD1-208ENST00000514232 ARHGEF15O94989 841 aa6.9□□□□□ -1.3
SMARCAD1-208ENST00000514232 WNT7BP56706 349 aa6.9□□□□□ -1.3
SMARCAD1-208ENST00000514232 MSTNO14793 375 aa6.89□□□□□ -1.31
SMARCAD1-208ENST00000514232 PPFIA3O75145 1194 aa6.89□□□□□ -1.31
SMARCAD1-208ENST00000514232 MMP16P51512 607 aa6.89□□□□□ -1.31
SMARCAD1-208ENST00000514232 SPOCK3Q9BQ16 436 aa6.89□□□□□ -1.31
SMARCAD1-208ENST00000514232 GPR161Q8N6U8 529 aaKnown RBP6.88□□□□□ -1.31
SMARCAD1-208ENST00000514232 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.87□□□□□ -1.31
SMARCAD1-208ENST00000514232 PROCP04070 461 aa6.87□□□□□ -1.31
SMARCAD1-208ENST00000514232 FAM161AQ3B820 660 aa6.87□□□□□ -1.31
SMARCAD1-208ENST00000514232 CNTNAP3BQ96NU0 1288 aa6.87□□□□□ -1.31
SMARCAD1-208ENST00000514232 CNTNAP3Q9BZ76 1288 aa6.87□□□□□ -1.31
SMARCAD1-208ENST00000514232 FECHP22830 423 aa6.86□□□□□ -1.31
SMARCAD1-208ENST00000514232 FUT2Q10981 343 aa6.86□□□□□ -1.31
SMARCAD1-208ENST00000514232 PLA2G4EQ3MJ16 856 aa6.86□□□□□ -1.31
SMARCAD1-208ENST00000514232 MRPL14Q6P1L8 145 aaKnown RBP6.86□□□□□ -1.31
SMARCAD1-208ENST00000514232 RNF19BQ6ZMZ0 732 aa6.86□□□□□ -1.31
SMARCAD1-208ENST00000514232 ATP6V1AP38606 617 aa6.85□□□□□ -1.31
SMARCAD1-208ENST00000514232 PTGDRQ13258 359 aa6.85□□□□□ -1.31
SMARCAD1-208ENST00000514232 WHAMMQ8TF30 809 aa6.85□□□□□ -1.31
SMARCAD1-208ENST00000514232 SVOPQ8N4V2 548 aa6.84□□□□□ -1.31
SMARCAD1-208ENST00000514232 BTBD11A6QL63 1104 aa6.83□□□□□ -1.32
SMARCAD1-208ENST00000514232 PURBQ96QR8 312 aaKnown RBP6.83□□□□□ -1.32
SMARCAD1-208ENST00000514232 K7ELQ4 463 aaPredicted RBP6.82□□□□□ -1.32
SMARCAD1-208ENST00000514232 WASF2Q9Y6W5 498 aa6.82□□□□□ -1.32
SMARCAD1-208ENST00000514232 DXOO77932 396 aaKnown RBP6.81□□□□□ -1.32
SMARCAD1-208ENST00000514232 SLURP2P0DP57 97 aa6.81□□□□□ -1.32
SMARCAD1-208ENST00000514232 RSPH4AQ5TD94 716 aa6.81□□□□□ -1.32
SMARCAD1-208ENST00000514232 SCARF2Q96GP6 870 aaPredicted RBP6.81□□□□□ -1.32
SMARCAD1-208ENST00000514232 SCARF1Q14162 830 aa6.8□□□□□ -1.32
SMARCAD1-208ENST00000514232 MARSP56192 900 aaKnown RBP6.79□□□□□ -1.32
SMARCAD1-208ENST00000514232 E2F4Q16254 413 aa6.79□□□□□ -1.32
SMARCAD1-208ENST00000514232 RNFT1Q5M7Z0 435 aa6.79□□□□□ -1.32
SMARCAD1-208ENST00000514232 PXYLP1Q8TE99 480 aa6.79□□□□□ -1.32
SMARCAD1-208ENST00000514232 COL25A1Q9BXS0 654 aaPredicted RBP6.79□□□□□ -1.32
SMARCAD1-208ENST00000514232 KRTAP19-1Q8IUB9 90 aa6.78□□□□□ -1.32
SMARCAD1-208ENST00000514232 DCAF5Q96JK2 942 aa6.78□□□□□ -1.32
SMARCAD1-208ENST00000514232 EHBP1Q8NDI1 1231 aa6.76□□□□□ -1.33
SMARCAD1-208ENST00000514232 MAN1A2O60476 641 aa6.75□□□□□ -1.33
SMARCAD1-208ENST00000514232 TIMP2P16035 220 aa6.75□□□□□ -1.33
SMARCAD1-208ENST00000514232 KLF16Q9BXK1 252 aaPredicted RBP6.75□□□□□ -1.33
SMARCAD1-208ENST00000514232 GCGRP47871 477 aa6.74□□□□□ -1.33
SMARCAD1-208ENST00000514232 KRTAP4-7Q9BYR0 210 aa6.74□□□□□ -1.33
SMARCAD1-208ENST00000514232 NANOS1Q8WY41 292 aaKnown RBP6.73□□□□□ -1.33
SMARCAD1-208ENST00000514232 NNTQ13423 1086 aa6.72□□□□□ -1.33
SMARCAD1-208ENST00000514232 CCDC24Q8N4L8 307 aa6.72□□□□□ -1.33
SMARCAD1-208ENST00000514232 RDH13Q8NBN7 331 aa6.72□□□□□ -1.33
SMARCAD1-208ENST00000514232 GALNT6Q8NCL4 622 aa6.71□□□□□ -1.34
SMARCAD1-208ENST00000514232 TLL2Q9Y6L7 1015 aa6.71□□□□□ -1.34
SMARCAD1-208ENST00000514232 OATP04181 439 aa6.7□□□□□ -1.34
SMARCAD1-208ENST00000514232 ADH1CP00326 375 aa6.69□□□□□ -1.34
SMARCAD1-208ENST00000514232 WDR4P57081 412 aaKnown RBP6.69□□□□□ -1.34
SMARCAD1-208ENST00000514232 Q3C1V9 767 aa6.69□□□□□ -1.34
SMARCAD1-208ENST00000514232 METTL3Q86U44 580 aaKnown RBP6.69□□□□□ -1.34
SMARCAD1-208ENST00000514232 USB1Q9BQ65 265 aaKnown RBP6.69□□□□□ -1.34
SMARCAD1-208ENST00000514232 DNMT3LQ9UJW3 386 aa6.69□□□□□ -1.34
SMARCAD1-208ENST00000514232 BAG6P46379 1132 aa6.68□□□□□ -1.34
SMARCAD1-208ENST00000514232 SH3BP2P78314 561 aa6.68□□□□□ -1.34
SMARCAD1-208ENST00000514232 PTCRAQ6ISU1 281 aaPredicted RBP6.68□□□□□ -1.34
SMARCAD1-208ENST00000514232 MPNDQ8N594 471 aa6.68□□□□□ -1.34
SMARCAD1-208ENST00000514232 DAXXQ9UER7 740 aaPredicted RBP6.68□□□□□ -1.34
SMARCAD1-208ENST00000514232 LYPD4Q6UWN0 246 aa6.67□□□□□ -1.34
SMARCAD1-208ENST00000514232 SOS2Q07890 1332 aaPredicted RBP6.67□□□□□ -1.34
SMARCAD1-208ENST00000514232 DDX11L8A8MPP1 907 aa6.66□□□□□ -1.34
SMARCAD1-208ENST00000514232 MLLT3P42568 568 aaPredicted RBP6.66□□□□□ -1.34
SMARCAD1-208ENST00000514232 C6orf118Q5T5N4 469 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms