RNA–Protein interactions for RNA: ENST00000514231.1

PDE4D-221, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-221ENST00000514231 SLC19A1P41440 591 aa12.49□□□□□ -0.41
PDE4D-221ENST00000514231 MMP16P51512 607 aa12.48□□□□□ -0.41
PDE4D-221ENST00000514231 SYMPKQ92797 1274 aaKnown RBP12.47□□□□□ -0.41
PDE4D-221ENST00000514231 EMID1Q96A84 441 aaPredicted RBP12.47□□□□□ -0.41
PDE4D-221ENST00000514231 PRDM9Q9NQV7 894 aa12.47□□□□□ -0.41
PDE4D-221ENST00000514231 RSBN1LQ6PCB5 846 aaPredicted RBP12.46□□□□□ -0.41
PDE4D-221ENST00000514231 RETREG3Q86VR2 466 aa12.46□□□□□ -0.41
PDE4D-221ENST00000514231 C6orf229H3BNL8 230 aa12.45□□□□□ -0.42
PDE4D-221ENST00000514231 SPTLC1O15269 473 aa12.45□□□□□ -0.42
PDE4D-221ENST00000514231 LIAT1Q6ZQX7 453 aa12.45□□□□□ -0.42
PDE4D-221ENST00000514231 IRX2Q9BZI1 471 aaPredicted RBP12.45□□□□□ -0.42
PDE4D-221ENST00000514231 KDM4CQ9H3R0 1056 aa12.45□□□□□ -0.42
PDE4D-221ENST00000514231 DXOO77932 396 aaKnown RBP12.44□□□□□ -0.42
PDE4D-221ENST00000514231 TPRNQ4KMQ1 711 aa12.44□□□□□ -0.42
PDE4D-221ENST00000514231 PLA2G2CQ5R387 149 aa12.44□□□□□ -0.42
PDE4D-221ENST00000514231 RIC3Q7Z5B4 369 aa12.44□□□□□ -0.42
PDE4D-221ENST00000514231 GPBP1L1Q9HC44 474 aaPredicted RBP12.44□□□□□ -0.42
PDE4D-221ENST00000514231 FCF1Q9Y324 198 aaKnown RBP12.44□□□□□ -0.42
PDE4D-221ENST00000514231 SPDYE5A6NIY4 337 aa12.43□□□□□ -0.42
PDE4D-221ENST00000514231 SPRYD7Q5W111 196 aa12.43□□□□□ -0.42
PDE4D-221ENST00000514231 RSPH6AQ9H0K4 717 aa12.43□□□□□ -0.42
PDE4D-221ENST00000514231 MTMR2Q13614 643 aa12.42□□□□□ -0.42
PDE4D-221ENST00000514231 MYSM1Q5VVJ2 828 aa12.42□□□□□ -0.42
PDE4D-221ENST00000514231 RPIAP49247 311 aa12.41□□□□□ -0.42
PDE4D-221ENST00000514231 PCDHB15Q9Y5E8 787 aa12.41□□□□□ -0.42
PDE4D-221ENST00000514231 JUNDP17535 347 aa12.4□□□□□ -0.42
PDE4D-221ENST00000514231 TUSC1Q2TAM9 212 aa12.4□□□□□ -0.42
PDE4D-221ENST00000514231 ZNF598Q86UK7 904 aaKnown RBP12.4□□□□□ -0.42
PDE4D-221ENST00000514231 PRPF38BQ5VTL8 546 aaKnown RBP12.39□□□□□ -0.43
PDE4D-221ENST00000514231 DDRGK1Q96HY6 314 aa12.39□□□□□ -0.43
PDE4D-221ENST00000514231 FAM117AQ9C073 453 aa12.38□□□□□ -0.43
PDE4D-221ENST00000514231 CD2BP2O95400 341 aaKnown RBP12.37□□□□□ -0.43
PDE4D-221ENST00000514231 LAPTM4AQ15012 233 aa12.37□□□□□ -0.43
PDE4D-221ENST00000514231 ZBTB3Q9H5J0 574 aa12.37□□□□□ -0.43
PDE4D-221ENST00000514231 ZBTB24O43167 697 aaPredicted RBP12.36□□□□□ -0.43
PDE4D-221ENST00000514231 HRCP23327 699 aa12.36□□□□□ -0.43
PDE4D-221ENST00000514231 DESI1Q6ICB0 168 aa12.36□□□□□ -0.43
PDE4D-221ENST00000514231 PRR7Q8TB68 274 aa12.36□□□□□ -0.43
PDE4D-221ENST00000514231 LIMD1Q9UGP4 676 aa12.36□□□□□ -0.43
PDE4D-221ENST00000514231 GFRA3O60609 400 aa12.34□□□□□ -0.43
PDE4D-221ENST00000514231 ZNF697Q5TEC3 545 aa12.33□□□□□ -0.44
PDE4D-221ENST00000514231 CCDC24Q8N4L8 307 aa12.33□□□□□ -0.44
PDE4D-221ENST00000514231 CLK2P49760 499 aaKnown RBP12.32□□□□□ -0.44
PDE4D-221ENST00000514231 SKIV2LQ15477 1246 aaKnown RBP12.32□□□□□ -0.44
PDE4D-221ENST00000514231 NEUROD2Q15784 382 aa12.32□□□□□ -0.44
PDE4D-221ENST00000514231 POLR3EQ9NVU0 708 aa12.32□□□□□ -0.44
PDE4D-221ENST00000514231 PDZRN3Q9UPQ7 1066 aa12.32□□□□□ -0.44
PDE4D-221ENST00000514231 PLEKHG3A1L390 1219 aa12.31□□□□□ -0.44
PDE4D-221ENST00000514231 LILRB3O75022 631 aa12.31□□□□□ -0.44
PDE4D-221ENST00000514231 CSPP1Q1MSJ5 1256 aa12.31□□□□□ -0.44
PDE4D-221ENST00000514231 NUDT12Q9BQG2 462 aa12.31□□□□□ -0.44
PDE4D-221ENST00000514231 NRG2O14511 850 aaPredicted RBP12.3□□□□□ -0.44
PDE4D-221ENST00000514231 PTPRNQ16849 979 aa12.3□□□□□ -0.44
PDE4D-221ENST00000514231 SH3D19Q5HYK7 790 aa12.3□□□□□ -0.44
PDE4D-221ENST00000514231 TRIM67Q6ZTA4 783 aa12.3□□□□□ -0.44
PDE4D-221ENST00000514231 CABLES1Q8TDN4 633 aa12.3□□□□□ -0.44
PDE4D-221ENST00000514231 NUTM2BA6NNL0 878 aaPredicted RBP12.29□□□□□ -0.44
PDE4D-221ENST00000514231 NUTM2EB1AL46 878 aaPredicted RBP12.29□□□□□ -0.44
PDE4D-221ENST00000514231 CFAP99D6REC4 459 aa12.29□□□□□ -0.44
PDE4D-221ENST00000514231 PRR20EP86478 221 aa12.29□□□□□ -0.44
PDE4D-221ENST00000514231 PRR20CP86479 221 aa12.29□□□□□ -0.44
PDE4D-221ENST00000514231 PRR20DP86480 221 aa12.29□□□□□ -0.44
PDE4D-221ENST00000514231 PRR20BP86481 221 aa12.29□□□□□ -0.44
PDE4D-221ENST00000514231 PRR20AP86496 221 aa12.29□□□□□ -0.44
PDE4D-221ENST00000514231 QPCTQ16769 361 aa12.29□□□□□ -0.44
PDE4D-221ENST00000514231 NUTM2DQ5VT03 806 aaPredicted RBP12.29□□□□□ -0.44
PDE4D-221ENST00000514231 NUTM2AQ8IVF1 878 aaPredicted RBP12.29□□□□□ -0.44
PDE4D-221ENST00000514231 GDF9O60383 454 aa12.28□□□□□ -0.44
PDE4D-221ENST00000514231 BRPF1P55201 1214 aaPredicted RBP12.28□□□□□ -0.44
PDE4D-221ENST00000514231 EVA1BQ9NVM1 165 aa12.28□□□□□ -0.44
PDE4D-221ENST00000514231 CCNYL3P0C7X3 344 aa12.27□□□□□ -0.45
PDE4D-221ENST00000514231 LYPD8Q6UX82 237 aa12.27□□□□□ -0.45
PDE4D-221ENST00000514231 TRIM32Q13049 653 aa12.26□□□□□ -0.45
PDE4D-221ENST00000514231 PTCRAQ6ISU1 281 aaPredicted RBP12.25□□□□□ -0.45
PDE4D-221ENST00000514231 PKD2L1Q9P0L9 805 aa12.25□□□□□ -0.45
PDE4D-221ENST00000514231 RTL5Q5HYW3 569 aaPredicted RBP12.24□□□□□ -0.45
PDE4D-221ENST00000514231 GOPCQ9HD26 462 aa12.24□□□□□ -0.45
PDE4D-221ENST00000514231 KCNH2Q12809 1159 aa12.23□□□□□ -0.45
PDE4D-221ENST00000514231 PROCA1Q8NCQ7 364 aaPredicted RBP12.23□□□□□ -0.45
PDE4D-221ENST00000514231 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.23□□□□□ -0.45
PDE4D-221ENST00000514231 FOXC1Q12948 553 aa12.22□□□□□ -0.45
PDE4D-221ENST00000514231 Q6ZNB5 142 aa12.22□□□□□ -0.45
PDE4D-221ENST00000514231 IL27Q8NEV9 243 aa12.21□□□□□ -0.45
PDE4D-221ENST00000514231 TNFRSF10AO00220 468 aa12.2□□□□□ -0.46
PDE4D-221ENST00000514231 PRKCSHP14314 528 aaPredicted RBP12.2□□□□□ -0.46
PDE4D-221ENST00000514231 WNT7BP56706 349 aa12.2□□□□□ -0.46
PDE4D-221ENST00000514231 WNT7AO00755 349 aa12.19□□□□□ -0.46
PDE4D-221ENST00000514231 PPP2R2DQ66LE6 453 aa12.19□□□□□ -0.46
PDE4D-221ENST00000514231 HELBQ8NG08 1087 aaPredicted RBP12.18□□□□□ -0.46
PDE4D-221ENST00000514231 TSC1Q92574 1164 aa12.18□□□□□ -0.46
PDE4D-221ENST00000514231 UNC93B1Q9H1C4 597 aa12.18□□□□□ -0.46
PDE4D-221ENST00000514231 ATP1B4Q9UN42 357 aaPredicted RBP12.18□□□□□ -0.46
PDE4D-221ENST00000514231 PER1O15534 1290 aaPredicted RBP12.16□□□□□ -0.46
PDE4D-221ENST00000514231 F12P00748 615 aaPredicted RBP12.16□□□□□ -0.46
PDE4D-221ENST00000514231 CTHP32929 405 aa12.16□□□□□ -0.46
PDE4D-221ENST00000514231 SKOR1P84550 965 aa12.16□□□□□ -0.46
PDE4D-221ENST00000514231 DGAT1O75907 488 aa12.15□□□□□ -0.46
PDE4D-221ENST00000514231 RC3H1Q5TC82 1133 aaKnown RBP12.15□□□□□ -0.46
PDE4D-221ENST00000514231 TOR4AQ9NXH8 423 aa12.15□□□□□ -0.46
PDE4D-221ENST00000514231 FBXO31Q5XUX0 539 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms