RNA–Protein interactions for RNA: ENST00000514152.5

SH3D19-210, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SH3D19, Length 5,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-210ENST00000514152 PLEKHH2Q8IVE3 1493 aa8.7□□□□□ -1.02
SH3D19-210ENST00000514152 CASKIN1Q8WXD9 1431 aa8.7□□□□□ -1.02
SH3D19-210ENST00000514152 ZKSCAN1P17029 563 aaPredicted RBP8.69□□□□□ -1.02
SH3D19-210ENST00000514152 CCP110O43303 1012 aa8.69□□□□□ -1.02
SH3D19-210ENST00000514152 MCM5P33992 734 aa8.69□□□□□ -1.02
SH3D19-210ENST00000514152 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.69□□□□□ -1.02
SH3D19-210ENST00000514152 DYNC1I1O14576 645 aa8.69□□□□□ -1.02
SH3D19-210ENST00000514152 LEKR1Q6ZMV7 388 aa8.69□□□□□ -1.02
SH3D19-210ENST00000514152 PRDM10Q9NQV6 1147 aa8.69□□□□□ -1.02
SH3D19-210ENST00000514152 VPS37CA5D8V6 355 aaPredicted RBP8.69□□□□□ -1.02
SH3D19-210ENST00000514152 GCC1Q96CN9 775 aa8.69□□□□□ -1.02
SH3D19-210ENST00000514152 AK7Q96M32 723 aa8.69□□□□□ -1.02
SH3D19-210ENST00000514152 TRIM5Q9C035 493 aa8.69□□□□□ -1.02
SH3D19-210ENST00000514152 NAT10Q9H0A0 1025 aaKnown RBP8.68□□□□□ -1.02
SH3D19-210ENST00000514152 PPP2R1AP30153 589 aa8.68□□□□□ -1.02
SH3D19-210ENST00000514152 NCOA2Q15596 1464 aa8.68□□□□□ -1.02
SH3D19-210ENST00000514152 TSR1Q2NL82 804 aaKnown RBP8.68□□□□□ -1.02
SH3D19-210ENST00000514152 BCAR3O75815 825 aa8.68□□□□□ -1.02
SH3D19-210ENST00000514152 KCTD17Q8N5Z5 321 aa8.68□□□□□ -1.02
SH3D19-210ENST00000514152 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.68□□□□□ -1.02
SH3D19-210ENST00000514152 DHX8Q14562 1220 aaKnown RBP8.67□□□□□ -1.02
SH3D19-210ENST00000514152 WDR78Q5VTH9 848 aa8.67□□□□□ -1.02
SH3D19-210ENST00000514152 CCDC73Q6ZRK6 1079 aa8.67□□□□□ -1.02
SH3D19-210ENST00000514152 ERCC4Q92889 916 aaPredicted RBP8.67□□□□□ -1.02
SH3D19-210ENST00000514152 SYNJ1O43426 1573 aa8.67□□□□□ -1.02
SH3D19-210ENST00000514152 CBX1P83916 185 aa8.67□□□□□ -1.02
SH3D19-210ENST00000514152 TIAM1Q13009 1591 aa8.67□□□□□ -1.02
SH3D19-210ENST00000514152 STK26Q9P289 416 aa8.67□□□□□ -1.02
SH3D19-210ENST00000514152 HNRNPMP52272 730 aaKnown RBP eCLIP8.67□□□□□ -1.022e-7■■■□□ 16
SH3D19-210ENST00000514152 TMEM132AQ24JP5 1023 aa8.67□□□□□ -1.02
SH3D19-210ENST00000514152 ELL2O00472 640 aaPredicted RBP8.66□□□□□ -1.02
SH3D19-210ENST00000514152 CCDC192P0DO97 292 aa8.66□□□□□ -1.02
SH3D19-210ENST00000514152 RIPK4P57078 832 aa8.66□□□□□ -1.02
SH3D19-210ENST00000514152 RNF20Q5VTR2 975 aa8.66□□□□□ -1.02
SH3D19-210ENST00000514152 NBPF8Q3BBV2 869 aa8.66□□□□□ -1.02
SH3D19-210ENST00000514152 TBC1D2Q9BYX2 928 aa8.66□□□□□ -1.02
SH3D19-210ENST00000514152 TMCO4Q5TGY1 634 aa8.66□□□□□ -1.02
SH3D19-210ENST00000514152 TRIM63Q969Q1 353 aa8.66□□□□□ -1.02
SH3D19-210ENST00000514152 CT47B1P0C2W7 299 aaPredicted RBP8.66□□□□□ -1.02
SH3D19-210ENST00000514152 XPCQ01831 940 aaPredicted RBP8.66□□□□□ -1.02
SH3D19-210ENST00000514152 SPC24Q8NBT2 197 aa8.66□□□□□ -1.02
SH3D19-210ENST00000514152 CADPSQ9ULU8 1353 aa8.65□□□□□ -1.02
SH3D19-210ENST00000514152 CCDC97Q96F63 343 aaPredicted RBP8.65□□□□□ -1.02
SH3D19-210ENST00000514152 NEK4P51957 841 aa8.65□□□□□ -1.02
SH3D19-210ENST00000514152 CALCOCO1Q9P1Z2 691 aa8.65□□□□□ -1.02
SH3D19-210ENST00000514152 ZHX1Q9UKY1 873 aaPredicted RBP8.65□□□□□ -1.02
SH3D19-210ENST00000514152 WDR33Q9C0J8 1336 aaKnown RBP8.65□□□□□ -1.02
SH3D19-210ENST00000514152 XRCC6P12956 609 aaKnown RBP eCLIP8.65□□□□□ -1.03
SH3D19-210ENST00000514152 RDXP35241 583 aaKnown RBP8.65□□□□□ -1.03
SH3D19-210ENST00000514152 MVPQ14764 893 aaKnown RBP8.65□□□□□ -1.03
SH3D19-210ENST00000514152 STAC3Q96MF2 364 aa8.65□□□□□ -1.03
SH3D19-210ENST00000514152 IGF1RP08069 1367 aa8.65□□□□□ -1.03
SH3D19-210ENST00000514152 HOOK1Q9UJC3 728 aaKnown RBP8.65□□□□□ -1.03
SH3D19-210ENST00000514152 SCAPERQ9BY12 1400 aa8.64□□□□□ -1.03
SH3D19-210ENST00000514152 CREBRFQ8IUR6 639 aa8.64□□□□□ -1.03
SH3D19-210ENST00000514152 RUFY1Q96T51 708 aa8.64□□□□□ -1.03
SH3D19-210ENST00000514152 GNAI1P63096 354 aa8.64□□□□□ -1.03
SH3D19-210ENST00000514152 SOX12O15370 315 aa8.64□□□□□ -1.03
SH3D19-210ENST00000514152 DIAPH1O60610 1272 aaKnown RBP8.64□□□□□ -1.03
SH3D19-210ENST00000514152 BCL11BQ9C0K0 894 aaPredicted RBP8.64□□□□□ -1.03
SH3D19-210ENST00000514152 CGNQ9P2M7 1197 aaKnown RBP8.64□□□□□ -1.03
SH3D19-210ENST00000514152 EVC2Q86UK5 1308 aa8.64□□□□□ -1.03
SH3D19-210ENST00000514152 IPO7O95373 1038 aaKnown RBP8.64□□□□□ -1.03
SH3D19-210ENST00000514152 PRIMPOLQ96LW4 560 aa8.64□□□□□ -1.03
SH3D19-210ENST00000514152 NCOA1Q15788 1441 aa8.63□□□□□ -1.03
SH3D19-210ENST00000514152 H0YHG0 523 aa8.63□□□□□ -1.03
SH3D19-210ENST00000514152 TNPO1Q92973 898 aaKnown RBP8.63□□□□□ -1.03
SH3D19-210ENST00000514152 SYCE3A1L190 88 aa8.63□□□□□ -1.03
SH3D19-210ENST00000514152 SLFN5Q08AF3 891 aa8.63□□□□□ -1.03
SH3D19-210ENST00000514152 EFCAB2Q5VUJ9 269 aa8.63□□□□□ -1.03
SH3D19-210ENST00000514152 TCP11L2Q8N4U5 519 aa8.63□□□□□ -1.03
SH3D19-210ENST00000514152 ERICH4A6NGS2 130 aa8.63□□□□□ -1.03
SH3D19-210ENST00000514152 TRAK1Q9UPV9 953 aa8.63□□□□□ -1.03
SH3D19-210ENST00000514152 WDR63Q8IWG1 891 aa8.63□□□□□ -1.03
SH3D19-210ENST00000514152 ANKRD20A12PQ8NF67 263 aa8.63□□□□□ -1.03
SH3D19-210ENST00000514152 CHD1LQ86WJ1 897 aa8.62□□□□□ -1.03
SH3D19-210ENST00000514152 FIBPO43427 364 aa8.62□□□□□ -1.03
SH3D19-210ENST00000514152 PDCP20941 246 aa8.62□□□□□ -1.03
SH3D19-210ENST00000514152 HDGFP51858 240 aaKnown RBP8.62□□□□□ -1.03
SH3D19-210ENST00000514152 PPP4R3BQ5MIZ7 849 aa8.62□□□□□ -1.03
SH3D19-210ENST00000514152 CCDC27Q2M243 656 aa8.62□□□□□ -1.03
SH3D19-210ENST00000514152 GORABQ5T7V8 394 aa8.62□□□□□ -1.03
SH3D19-210ENST00000514152 USP8P40818 1118 aa8.62□□□□□ -1.03
SH3D19-210ENST00000514152 CDR1P51861 262 aa8.62□□□□□ -1.03
SH3D19-210ENST00000514152 SKAP1Q86WV1 359 aa8.62□□□□□ -1.03
SH3D19-210ENST00000514152 RASSF8Q8NHQ8 419 aa8.62□□□□□ -1.03
SH3D19-210ENST00000514152 PRXQ9BXM0 1461 aa8.61□□□□□ -1.03
SH3D19-210ENST00000514152 KIAA1107Q9UPP5 1409 aa8.61□□□□□ -1.03
SH3D19-210ENST00000514152 ERC2O15083 957 aa8.61□□□□□ -1.03
SH3D19-210ENST00000514152 GTPBP4Q9BZE4 634 aaKnown RBP8.61□□□□□ -1.03
SH3D19-210ENST00000514152 DEF6Q9H4E7 631 aa8.61□□□□□ -1.03
SH3D19-210ENST00000514152 ANKRD50Q9ULJ7 1429 aa8.61□□□□□ -1.03
SH3D19-210ENST00000514152 PES1O00541 588 aaKnown RBP8.61□□□□□ -1.03
SH3D19-210ENST00000514152 C20orf194Q5TEA3 1177 aa8.61□□□□□ -1.03
SH3D19-210ENST00000514152 KIF2AO00139 706 aaPredicted RBP8.61□□□□□ -1.03
SH3D19-210ENST00000514152 EIF3JO75822 258 aaKnown RBP8.61□□□□□ -1.03
SH3D19-210ENST00000514152 PSMA5P28066 241 aa8.61□□□□□ -1.03
SH3D19-210ENST00000514152 MPNDQ8N594 471 aa8.61□□□□□ -1.03
SH3D19-210ENST00000514152 TBC1D32Q96NH3 1257 aa8.61□□□□□ -1.03
SH3D19-210ENST00000514152 EHBP1L1Q8N3D4 1523 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms