RNA–Protein interactions for RNA: ENST00000514033.1

KLF3-203, Transcript of Kruppel like factor 3, humanhuman

TSL 1 (best) BASIC

Gene KLF3, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3-203ENST00000514033 CABP2Q9NPB3 220 aa29.33■■■□□ 2.29
KLF3-203ENST00000514033 USP32Q8NFA0 1604 aa29.32■■■□□ 2.28
KLF3-203ENST00000514033 HDGFP51858 240 aaKnown RBP29.31■■■□□ 2.28
KLF3-203ENST00000514033 NRXN3Q9Y4C0 1643 aa29.31■■■□□ 2.28
KLF3-203ENST00000514033 UBR1Q8IWV7 1749 aa29.3■■■□□ 2.28
KLF3-203ENST00000514033 ANKRD36BQ8N2N9 1353 aa29.3■■■□□ 2.28
KLF3-203ENST00000514033 NINLQ9Y2I6 1382 aa29.3■■■□□ 2.28
KLF3-203ENST00000514033 MINK1Q8N4C8 1332 aaPredicted RBP29.29■■■□□ 2.28
KLF3-203ENST00000514033 SRPK2P78362 688 aaKnown RBP29.27■■■□□ 2.28
KLF3-203ENST00000514033 RIMS1Q86UR5 1692 aaKnown RBP29.27■■■□□ 2.28
KLF3-203ENST00000514033 TMEM2Q9UHN6 1383 aa29.27■■■□□ 2.28
KLF3-203ENST00000514033 WDR43Q15061 677 aaKnown RBP eCLIP29.27■■■□□ 2.285e-6■■■□□ 16.3
KLF3-203ENST00000514033 NLRP1Q9C000 1473 aa29.27■■■□□ 2.28
KLF3-203ENST00000514033 ATAD2Q6PL18 1390 aa29.26■■■□□ 2.28
KLF3-203ENST00000514033 ABCC11Q96J66 1382 aa29.26■■■□□ 2.28
KLF3-203ENST00000514033 MYT1Q01538 1121 aa29.26■■■□□ 2.27
KLF3-203ENST00000514033 ADAMTS8Q9UP79 889 aa29.26■■■□□ 2.27
KLF3-203ENST00000514033 CGNL1Q0VF96 1302 aa29.24■■■□□ 2.27
KLF3-203ENST00000514033 PDE3BQ13370 1112 aa29.23■■■□□ 2.27
KLF3-203ENST00000514033 KDM4FA0A1W2PPD8 638 aa29.22■■■□□ 2.27
KLF3-203ENST00000514033 CEBPAP49715 358 aaPredicted RBP29.22■■■□□ 2.27
KLF3-203ENST00000514033 MORC1Q86VD1 984 aa29.22■■■□□ 2.27
KLF3-203ENST00000514033 C3P01024 1663 aa29.21■■■□□ 2.27
KLF3-203ENST00000514033 IRX6P78412 446 aaPredicted RBP29.21■■■□□ 2.27
KLF3-203ENST00000514033 METP08581 1390 aa29.21■■■□□ 2.27
KLF3-203ENST00000514033 ERICH6BQ5W0A0 696 aa29.21■■■□□ 2.27
KLF3-203ENST00000514033 NSD2O96028 1365 aa29.19■■■□□ 2.26
KLF3-203ENST00000514033 SALL2Q9Y467 1007 aaPredicted RBP29.19■■■□□ 2.26
KLF3-203ENST00000514033 CDK19Q9BWU1 502 aa29.19■■■□□ 2.26
KLF3-203ENST00000514033 A0A1W2PP64 1363 aa29.18■■■□□ 2.26
KLF3-203ENST00000514033 WAPLQ7Z5K2 1190 aa29.17■■■□□ 2.26
KLF3-203ENST00000514033 PLEKHH1Q9ULM0 1364 aa29.17■■■□□ 2.26
KLF3-203ENST00000514033 POLR3AO14802 1390 aaPredicted RBP29.16■■■□□ 2.26
KLF3-203ENST00000514033 KNDC1Q76NI1 1749 aa29.15■■■□□ 2.26
KLF3-203ENST00000514033 TERF2IPQ9NYB0 399 aa29.14■■■□□ 2.26
KLF3-203ENST00000514033 TECPR2O15040 1411 aa29.14■■■□□ 2.25
KLF3-203ENST00000514033 RNF123Q5XPI4 1314 aa29.13■■■□□ 2.25
KLF3-203ENST00000514033 SIRT1Q96EB6 747 aa29.12■■■□□ 2.25
KLF3-203ENST00000514033 CD163L1Q9NR16 1453 aa29.12■■■□□ 2.25
KLF3-203ENST00000514033 FAM135BQ49AJ0 1406 aa29.12■■■□□ 2.25
KLF3-203ENST00000514033 PLEKHG1Q9ULL1 1385 aa29.12■■■□□ 2.25
KLF3-203ENST00000514033 ADAMTS13Q76LX8 1427 aa29.1■■■□□ 2.25
KLF3-203ENST00000514033 CPS1P31327 1500 aa29.1■■■□□ 2.25
KLF3-203ENST00000514033 LTKP29376 864 aa29.08■■■□□ 2.25
KLF3-203ENST00000514033 TNNT2P45379 298 aaPredicted RBP29.08■■■□□ 2.25
KLF3-203ENST00000514033 PLPPR3Q6T4P5 718 aa29.08■■■□□ 2.25
KLF3-203ENST00000514033 TXNDC2Q86VQ3 553 aa29.08■■■□□ 2.25
KLF3-203ENST00000514033 HDGFL2Q7Z4V5 671 aaPredicted RBP29.07■■■□□ 2.24
KLF3-203ENST00000514033 SLIT1O75093 1534 aa29.07■■■□□ 2.24
KLF3-203ENST00000514033 ARHGAP23Q9P227 1491 aa29.06■■■□□ 2.24
KLF3-203ENST00000514033 CDCA7LQ96GN5 454 aa29.05■■■□□ 2.24
KLF3-203ENST00000514033 CABP1Q9NZU7 370 aa29.05■■■□□ 2.24
KLF3-203ENST00000514033 EID1Q9Y6B2 187 aa29.05■■■□□ 2.24
KLF3-203ENST00000514033 WASLO00401 505 aaPredicted RBP29.03■■■□□ 2.24
KLF3-203ENST00000514033 PPP4R2Q9NY27 417 aa29.03■■■□□ 2.24
KLF3-203ENST00000514033 MED14O60244 1454 aa29.03■■■□□ 2.24
KLF3-203ENST00000514033 ATP7BP35670 1465 aa29.03■■■□□ 2.24
KLF3-203ENST00000514033 SHPRHQ149N8 1683 aa29.02■■■□□ 2.24
KLF3-203ENST00000514033 MTHFSP49914 203 aa29.01■■■□□ 2.23
KLF3-203ENST00000514033 CCDC146Q8IYE0 955 aa29.01■■■□□ 2.23
KLF3-203ENST00000514033 CFAP53Q96M91 514 aa29■■■□□ 2.23
KLF3-203ENST00000514033 ANKRD26Q9UPS8 1709 aa29■■■□□ 2.23
KLF3-203ENST00000514033 THEMISQ8N1K5 641 aaPredicted RBP28.99■■■□□ 2.23
KLF3-203ENST00000514033 ZNF521Q96K83 1311 aa28.99■■■□□ 2.23
KLF3-203ENST00000514033 FYB1O15117 783 aa28.98■■■□□ 2.23
KLF3-203ENST00000514033 GGNBP2Q9H3C7 697 aa28.98■■■□□ 2.23
KLF3-203ENST00000514033 RCAN3Q9UKA8 241 aa28.98■■■□□ 2.23
KLF3-203ENST00000514033 ROBO2Q9HCK4 1378 aa28.97■■■□□ 2.23
KLF3-203ENST00000514033 APAF1O14727 1248 aa28.95■■■□□ 2.22
KLF3-203ENST00000514033 NGEFQ8N5V2 710 aa28.94■■■□□ 2.22
KLF3-203ENST00000514033 PPIP5K1Q6PFW1 1433 aa28.94■■■□□ 2.22
KLF3-203ENST00000514033 SLC26A8Q96RN1 970 aa28.93■■■□□ 2.22
KLF3-203ENST00000514033 KIF20BQ96Q89 1820 aa28.93■■■□□ 2.22
KLF3-203ENST00000514033 GOLGA2Q08379 1002 aa28.91■■■□□ 2.22
KLF3-203ENST00000514033 NUDT16Q96DE0 195 aaKnown RBP28.91■■■□□ 2.22
KLF3-203ENST00000514033 TBX22Q9Y458 520 aa28.91■■■□□ 2.22
KLF3-203ENST00000514033 CPSF1Q10570 1443 aaKnown RBP28.91■■■□□ 2.22
KLF3-203ENST00000514033 ADGRB2O60241 1585 aa28.91■■■□□ 2.22
KLF3-203ENST00000514033 RRP1P56182 461 aaKnown RBP28.91■■■□□ 2.22
KLF3-203ENST00000514033 PTPRUQ92729 1446 aa28.91■■■□□ 2.22
KLF3-203ENST00000514033 DIP2AQ14689 1571 aa28.89■■■□□ 2.22
KLF3-203ENST00000514033 CEP170BQ9Y4F5 1589 aaPredicted RBP28.88■■■□□ 2.21
KLF3-203ENST00000514033 CCDC61Q9Y6R9 512 aa28.88■■■□□ 2.21
KLF3-203ENST00000514033 CDC42BPGQ6DT37 1551 aa28.88■■■□□ 2.21
KLF3-203ENST00000514033 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.87■■■□□ 2.21
KLF3-203ENST00000514033 EDC4Q6P2E9 1401 aaKnown RBP28.87■■■□□ 2.21
KLF3-203ENST00000514033 DUSP27Q5VZP5 1158 aa28.86■■■□□ 2.21
KLF3-203ENST00000514033 RUNDC1Q96C34 613 aa28.86■■■□□ 2.21
KLF3-203ENST00000514033 SLFN5Q08AF3 891 aa28.84■■■□□ 2.21
KLF3-203ENST00000514033 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.84■■■□□ 2.21
KLF3-203ENST00000514033 AMOTL2Q9Y2J4 779 aa28.83■■■□□ 2.21
KLF3-203ENST00000514033 COL3A1P02461 1466 aaPredicted RBP28.83■■■□□ 2.21
KLF3-203ENST00000514033 PRR36Q9H6K5 1346 aa28.82■■■□□ 2.2
KLF3-203ENST00000514033 IQSEC2Q5JU85 1478 aa28.82■■■□□ 2.2
KLF3-203ENST00000514033 SETD1BQ9UPS6 1966 aaKnown RBP28.82■■■□□ 2.2
KLF3-203ENST00000514033 PTCH1Q13635 1447 aa28.81■■■□□ 2.2
KLF3-203ENST00000514033 TRMT2AQ8IZ69 625 aaKnown RBP28.81■■■□□ 2.2
KLF3-203ENST00000514033 B4GALNT3Q6L9W6 998 aa28.8■■■□□ 2.2
KLF3-203ENST00000514033 NCKAP5LQ9HCH0 1330 aa28.8■■■□□ 2.2
KLF3-203ENST00000514033 MON2Q7Z3U7 1717 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms