RNA–Protein interactions for RNA: ENST00000513895.1

LINC00616-204, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-204ENST00000513895 RNF19BQ6ZMZ0 732 aa10.89□□□□□ -0.67
LINC00616-204ENST00000513895 POTECB2RU33 542 aa10.88□□□□□ -0.67
LINC00616-204ENST00000513895 ST8SIA5O15466 376 aa10.88□□□□□ -0.67
LINC00616-204ENST00000513895 CD2BP2O95400 341 aaKnown RBP10.87□□□□□ -0.67
LINC00616-204ENST00000513895 GRIPAP1Q4V328 841 aa10.87□□□□□ -0.67
LINC00616-204ENST00000513895 AAASQ9NRG9 546 aa10.87□□□□□ -0.67
LINC00616-204ENST00000513895 CD46P15529 392 aa10.86□□□□□ -0.67
LINC00616-204ENST00000513895 TOR4AQ9NXH8 423 aa10.86□□□□□ -0.67
LINC00616-204ENST00000513895 KDM2AQ9Y2K7 1162 aa10.86□□□□□ -0.67
LINC00616-204ENST00000513895 MAP2K5Q13163 448 aa10.85□□□□□ -0.67
LINC00616-204ENST00000513895 CRIPAKQ8N1N5 446 aa10.84□□□□□ -0.67
LINC00616-204ENST00000513895 VSIG10Q8N0Z9 540 aa10.83□□□□□ -0.68
LINC00616-204ENST00000513895 ZBTB24O43167 697 aaPredicted RBP10.82□□□□□ -0.68
LINC00616-204ENST00000513895 AVPP01185 164 aa10.82□□□□□ -0.68
LINC00616-204ENST00000513895 Q3C1V9 767 aa10.82□□□□□ -0.68
LINC00616-204ENST00000513895 CYP4X1Q8N118 509 aa10.82□□□□□ -0.68
LINC00616-204ENST00000513895 KDM4AO75164 1064 aa10.8□□□□□ -0.68
LINC00616-204ENST00000513895 MMP16P51512 607 aa10.8□□□□□ -0.68
LINC00616-204ENST00000513895 TPRNQ4KMQ1 711 aa10.8□□□□□ -0.68
LINC00616-204ENST00000513895 IRF6O14896 467 aa10.79□□□□□ -0.68
LINC00616-204ENST00000513895 MDM2Q00987 491 aaPredicted RBP10.78□□□□□ -0.68
LINC00616-204ENST00000513895 TULP1O00294 542 aaPredicted RBP10.77□□□□□ -0.69
LINC00616-204ENST00000513895 TRIM32Q13049 653 aa10.77□□□□□ -0.69
LINC00616-204ENST00000513895 CTC1Q2NKJ3 1217 aa10.77□□□□□ -0.69
LINC00616-204ENST00000513895 USB1Q9BQ65 265 aaKnown RBP10.77□□□□□ -0.69
LINC00616-204ENST00000513895 WNT7AO00755 349 aa10.76□□□□□ -0.69
LINC00616-204ENST00000513895 AXIN1O15169 862 aa10.76□□□□□ -0.69
LINC00616-204ENST00000513895 DXOO77932 396 aaKnown RBP10.76□□□□□ -0.69
LINC00616-204ENST00000513895 USP46P62068 366 aa10.76□□□□□ -0.69
LINC00616-204ENST00000513895 HLA-CQ95604 372 aa10.76□□□□□ -0.69
LINC00616-204ENST00000513895 DACH1Q9UI36 760 aa10.76□□□□□ -0.69
LINC00616-204ENST00000513895 MINK1Q8N4C8 1332 aaPredicted RBP10.76□□□□□ -0.69
LINC00616-204ENST00000513895 TTC24A2A3L6 582 aaPredicted RBP10.75□□□□□ -0.69
LINC00616-204ENST00000513895 HOXA2O43364 376 aa10.74□□□□□ -0.69
LINC00616-204ENST00000513895 SMCPP49901 116 aaPredicted RBP10.74□□□□□ -0.69
LINC00616-204ENST00000513895 CCDC102AQ96A19 550 aa10.74□□□□□ -0.69
LINC00616-204ENST00000513895 CECR2Q9BXF3 1484 aa10.74□□□□□ -0.69
LINC00616-204ENST00000513895 GMPR2Q9P2T1 348 aaKnown RBP10.72□□□□□ -0.69
LINC00616-204ENST00000513895 SNIP1Q8TAD8 396 aaKnown RBP10.71□□□□□ -0.69
LINC00616-204ENST00000513895 MRGPRX2Q96LB1 330 aa10.71□□□□□ -0.69
LINC00616-204ENST00000513895 GPCPD1Q9NPB8 672 aa10.71□□□□□ -0.69
LINC00616-204ENST00000513895 SMPD1P17405 629 aa10.7□□□□□ -0.7
LINC00616-204ENST00000513895 LCE2AQ5TA79 106 aaPredicted RBP10.7□□□□□ -0.7
LINC00616-204ENST00000513895 TREML4Q6UXN2 200 aa10.7□□□□□ -0.7
LINC00616-204ENST00000513895 GUCA2AQ02747 115 aa10.69□□□□□ -0.7
LINC00616-204ENST00000513895 EIF4G1Q04637 1599 aaKnown RBP10.69□□□□□ -0.7
LINC00616-204ENST00000513895 CLCN1P35523 988 aa10.68□□□□□ -0.7
LINC00616-204ENST00000513895 CCDC24Q8N4L8 307 aa10.68□□□□□ -0.7
LINC00616-204ENST00000513895 REPIN1Q9BWE0 567 aaKnown RBP10.68□□□□□ -0.7
LINC00616-204ENST00000513895 FAM217BQ9NTX9 383 aaPredicted RBP10.68□□□□□ -0.7
LINC00616-204ENST00000513895 C11orf95C9JLR9 678 aaPredicted RBP10.67□□□□□ -0.7
LINC00616-204ENST00000513895 BAZ1AQ9NRL2 1556 aaPredicted RBP10.67□□□□□ -0.7
LINC00616-204ENST00000513895 J3QL48 77 aa10.66□□□□□ -0.7
LINC00616-204ENST00000513895 SMARCA4P51532 1647 aa10.66□□□□□ -0.7
LINC00616-204ENST00000513895 JUNDP17535 347 aa10.65□□□□□ -0.7
LINC00616-204ENST00000513895 MROH2BQ7Z745 1585 aa10.65□□□□□ -0.71
LINC00616-204ENST00000513895 WNT7BP56706 349 aa10.64□□□□□ -0.71
LINC00616-204ENST00000513895 SKOR1P84550 965 aa10.64□□□□□ -0.71
LINC00616-204ENST00000513895 SYMPKQ92797 1274 aaKnown RBP10.64□□□□□ -0.71
LINC00616-204ENST00000513895 RC3H1Q5TC82 1133 aaKnown RBP10.63□□□□□ -0.71
LINC00616-204ENST00000513895 NUTM1Q86Y26 1132 aa10.63□□□□□ -0.71
LINC00616-204ENST00000513895 ATP13A2Q9NQ11 1180 aa10.63□□□□□ -0.71
LINC00616-204ENST00000513895 RETREG3Q86VR2 466 aa10.62□□□□□ -0.71
LINC00616-204ENST00000513895 RSF1Q96T23 1441 aaPredicted RBP10.6□□□□□ -0.71
LINC00616-204ENST00000513895 KRI1Q8N9T8 703 aaKnown RBP10.6□□□□□ -0.71
LINC00616-204ENST00000513895 HPS1Q92902 700 aa10.6□□□□□ -0.71
LINC00616-204ENST00000513895 NUDT12Q9BQG2 462 aa10.6□□□□□ -0.71
LINC00616-204ENST00000513895 WFS1O76024 890 aa10.59□□□□□ -0.71
LINC00616-204ENST00000513895 CC2D2AQ9P2K1 1620 aa10.58□□□□□ -0.72
LINC00616-204ENST00000513895 PEG3Q9GZU2 1588 aa10.58□□□□□ -0.72
LINC00616-204ENST00000513895 FDX1P10109 184 aa10.58□□□□□ -0.72
LINC00616-204ENST00000513895 NFX1Q12986 1120 aaKnown RBP10.58□□□□□ -0.72
LINC00616-204ENST00000513895 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.58□□□□□ -0.72
LINC00616-204ENST00000513895 PCDHGC3Q9UN70 934 aa10.58□□□□□ -0.72
LINC00616-204ENST00000513895 TRIM47Q96LD4 638 aa10.57□□□□□ -0.72
LINC00616-204ENST00000513895 SNRPBP14678 240 aaKnown RBP10.56□□□□□ -0.72
LINC00616-204ENST00000513895 PTCRAQ6ISU1 281 aaPredicted RBP10.56□□□□□ -0.72
LINC00616-204ENST00000513895 SENP2Q9HC62 589 aa10.56□□□□□ -0.72
LINC00616-204ENST00000513895 C6orf229H3BNL8 230 aa10.55□□□□□ -0.72
LINC00616-204ENST00000513895 ATAD2BQ9ULI0 1458 aa10.55□□□□□ -0.72
LINC00616-204ENST00000513895 ALDH1A1P00352 501 aa10.54□□□□□ -0.72
LINC00616-204ENST00000513895 SSTR3P32745 418 aaPredicted RBP10.54□□□□□ -0.72
LINC00616-204ENST00000513895 SPIRE2Q8WWL2 714 aa10.54□□□□□ -0.72
LINC00616-204ENST00000513895 WIZO95785 1651 aa10.53□□□□□ -0.72
LINC00616-204ENST00000513895 SMARCA2P51531 1590 aa10.53□□□□□ -0.72
LINC00616-204ENST00000513895 CCNYL3P0C7X3 344 aa10.53□□□□□ -0.72
LINC00616-204ENST00000513895 MS4A1P11836 297 aa10.53□□□□□ -0.72
LINC00616-204ENST00000513895 EHBP1Q8NDI1 1231 aa10.53□□□□□ -0.72
LINC00616-204ENST00000513895 SIAH2O43255 324 aa10.52□□□□□ -0.73
LINC00616-204ENST00000513895 KIFC2Q96AC6 838 aa10.52□□□□□ -0.73
LINC00616-204ENST00000513895 NCAPD3P42695 1498 aa10.52□□□□□ -0.73
LINC00616-204ENST00000513895 TTLL12Q14166 644 aaPredicted RBP10.51□□□□□ -0.73
LINC00616-204ENST00000513895 PTPRNQ16849 979 aa10.51□□□□□ -0.73
LINC00616-204ENST00000513895 MOXD2PA6NHM9 499 aa10.5□□□□□ -0.73
LINC00616-204ENST00000513895 WIPF1O43516 503 aa10.5□□□□□ -0.73
LINC00616-204ENST00000513895 NDUFV2P19404 249 aa10.5□□□□□ -0.73
LINC00616-204ENST00000513895 SH3BP2P78314 561 aa10.5□□□□□ -0.73
LINC00616-204ENST00000513895 AMHR2Q16671 573 aa10.5□□□□□ -0.73
LINC00616-204ENST00000513895 BARGINQ6ZT62 677 aa10.5□□□□□ -0.73
LINC00616-204ENST00000513895 TERTO14746 1132 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms