RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 USP47Q96K76 1375 aa16.05■□□□□ 0.16
HTT-213ENST00000513806 NUTM2FA1L443 756 aa16.05■□□□□ 0.16
HTT-213ENST00000513806 CENPJQ9HC77 1338 aaPredicted RBP16.04■□□□□ 0.16
HTT-213ENST00000513806 FMN2Q9NZ56 1722 aa16.04■□□□□ 0.16
HTT-213ENST00000513806 MSH6P52701 1360 aa16.03■□□□□ 0.16
HTT-213ENST00000513806 SIRT1Q96EB6 747 aa16.03■□□□□ 0.16
HTT-213ENST00000513806 ST20-MTHFSA0A0A6YYL1 179 aa16.02■□□□□ 0.16
HTT-213ENST00000513806 ADGRB2O60241 1585 aa16.01■□□□□ 0.15
HTT-213ENST00000513806 TULP4Q9NRJ4 1543 aa16.01■□□□□ 0.15
HTT-213ENST00000513806 HSPA5P11021 654 aaKnown RBP16.01■□□□□ 0.15
HTT-213ENST00000513806 USP32Q8NFA0 1604 aa16.01■□□□□ 0.15
HTT-213ENST00000513806 EIF3AQ14152 1382 aaKnown RBP16■□□□□ 0.15
HTT-213ENST00000513806 CDC42BPGQ6DT37 1551 aa16■□□□□ 0.15
HTT-213ENST00000513806 C19orf44Q9H6X5 657 aa16■□□□□ 0.15
HTT-213ENST00000513806 NCOA3Q9Y6Q9 1424 aa16■□□□□ 0.15
HTT-213ENST00000513806 UBAP1LF5GYI3 381 aa15.99■□□□□ 0.15
HTT-213ENST00000513806 IQSEC2Q5JU85 1478 aa15.98■□□□□ 0.15
HTT-213ENST00000513806 ATF3P18847 181 aa15.98■□□□□ 0.15
HTT-213ENST00000513806 MST1RQ04912 1400 aa15.97■□□□□ 0.15
HTT-213ENST00000513806 ZEB1P37275 1124 aaPredicted RBP15.97■□□□□ 0.15
HTT-213ENST00000513806 PIP4K2BP78356 416 aa15.97■□□□□ 0.15
HTT-213ENST00000513806 TESK2Q96S53 571 aa15.97■□□□□ 0.15
HTT-213ENST00000513806 SCAF1Q9H7N4 1312 aaKnown RBP15.96■□□□□ 0.15
HTT-213ENST00000513806 WASLO00401 505 aaPredicted RBP15.96■□□□□ 0.15
HTT-213ENST00000513806 EIF4G2P78344 907 aaKnown RBP eCLIP15.96■□□□□ 0.15
HTT-213ENST00000513806 CDK19Q9BWU1 502 aa15.96■□□□□ 0.15
HTT-213ENST00000513806 CABP2Q9NPB3 220 aa15.96■□□□□ 0.15
HTT-213ENST00000513806 ROBO1Q9Y6N7 1651 aa15.95■□□□□ 0.14
HTT-213ENST00000513806 DISP3Q9P2K9 1392 aa15.95■□□□□ 0.14
HTT-213ENST00000513806 PRR36Q9H6K5 1346 aa15.94■□□□□ 0.14
HTT-213ENST00000513806 DCCP43146 1447 aa15.94■□□□□ 0.14
HTT-213ENST00000513806 CADPS2Q86UW7 1296 aa15.94■□□□□ 0.14
HTT-213ENST00000513806 TOPAZ1Q8N9V7 1692 aa15.93■□□□□ 0.14
HTT-213ENST00000513806 C1orf167Q5SNV9 1468 aa15.93■□□□□ 0.14
HTT-213ENST00000513806 ORAI2Q96SN7 254 aa15.93■□□□□ 0.14
HTT-213ENST00000513806 ITSN1Q15811 1721 aa15.92■□□□□ 0.14
HTT-213ENST00000513806 SRPK2P78362 688 aaKnown RBP15.92■□□□□ 0.14
HTT-213ENST00000513806 DDX17Q92841 729 aaKnown RBP15.92■□□□□ 0.14
HTT-213ENST00000513806 SLAIN2Q9P270 581 aa15.92■□□□□ 0.14
HTT-213ENST00000513806 ATP7BP35670 1465 aa15.91■□□□□ 0.14
HTT-213ENST00000513806 C11orf95C9JLR9 678 aaPredicted RBP15.91■□□□□ 0.14
HTT-213ENST00000513806 TOM1O60784 492 aa15.91■□□□□ 0.14
HTT-213ENST00000513806 EVC2Q86UK5 1308 aa15.91■□□□□ 0.14
HTT-213ENST00000513806 SBNO2Q9Y2G9 1366 aa15.9■□□□□ 0.14
HTT-213ENST00000513806 NUDT16Q96DE0 195 aaKnown RBP15.9■□□□□ 0.14
HTT-213ENST00000513806 POLR3GLQ9BT43 218 aa15.9■□□□□ 0.14
HTT-213ENST00000513806 ESCO1Q5FWF5 840 aa15.89■□□□□ 0.13
HTT-213ENST00000513806 PMFBP1Q8TBY8 1022 aa15.89■□□□□ 0.13
HTT-213ENST00000513806 BRINP3Q76B58 766 aa15.88■□□□□ 0.13
HTT-213ENST00000513806 MYOM1P52179 1685 aa15.88■□□□□ 0.13
HTT-213ENST00000513806 TMF1P82094 1093 aa15.87■□□□□ 0.13
HTT-213ENST00000513806 PHLPP1O60346 1717 aa15.87■□□□□ 0.13
HTT-213ENST00000513806 NHSL1Q5SYE7 1610 aa15.86■□□□□ 0.13
HTT-213ENST00000513806 ANKARQ7Z5J8 1434 aa15.86■□□□□ 0.13
HTT-213ENST00000513806 XPCQ01831 940 aaPredicted RBP15.86■□□□□ 0.13
HTT-213ENST00000513806 KIF1AQ12756 1690 aa15.86■□□□□ 0.13
HTT-213ENST00000513806 PPIP5K1Q6PFW1 1433 aa15.85■□□□□ 0.13
HTT-213ENST00000513806 AKAP12Q02952 1782 aa15.85■□□□□ 0.13
HTT-213ENST00000513806 CABP1Q9NZU7 370 aa15.84■□□□□ 0.13
HTT-213ENST00000513806 PHF8Q9UPP1 1060 aa15.84■□□□□ 0.13
HTT-213ENST00000513806 FOXO3O43524 673 aa15.83■□□□□ 0.12
HTT-213ENST00000513806 TMC1Q8TDI8 760 aa15.83■□□□□ 0.12
HTT-213ENST00000513806 FBXO41Q8TF61 875 aa15.82■□□□□ 0.12
HTT-213ENST00000513806 SLC12A5Q9H2X9 1139 aa15.82■□□□□ 0.12
HTT-213ENST00000513806 KIF7Q2M1P5 1343 aa15.81■□□□□ 0.12
HTT-213ENST00000513806 CCDC61Q9Y6R9 512 aa15.81■□□□□ 0.12
HTT-213ENST00000513806 COL16A1Q07092 1604 aaPredicted RBP15.8■□□□□ 0.12
HTT-213ENST00000513806 AHDC1Q5TGY3 1603 aaPredicted RBP15.8■□□□□ 0.12
HTT-213ENST00000513806 ATAD2Q6PL18 1390 aa15.8■□□□□ 0.12
HTT-213ENST00000513806 ACEP12821 1306 aa15.8■□□□□ 0.12
HTT-213ENST00000513806 HSPA1LP34931 641 aa15.8■□□□□ 0.12
HTT-213ENST00000513806 NGDNQ8NEJ9 315 aaKnown RBP15.8■□□□□ 0.12
HTT-213ENST00000513806 TRPM3Q9HCF6 1732 aaPredicted RBP15.8■□□□□ 0.12
HTT-213ENST00000513806 CD163L1Q9NR16 1453 aa15.79■□□□□ 0.12
HTT-213ENST00000513806 MON2Q7Z3U7 1717 aa15.79■□□□□ 0.12
HTT-213ENST00000513806 PXDNQ92626 1479 aa15.78■□□□□ 0.12
HTT-213ENST00000513806 WASHC2AQ641Q2 1341 aa15.78■□□□□ 0.12
HTT-213ENST00000513806 CCDC7Q96M83 1385 aa15.77■□□□□ 0.12
HTT-213ENST00000513806 PLEKHG3A1L390 1219 aa15.77■□□□□ 0.12
HTT-213ENST00000513806 PLEKHG5O94827 1062 aa15.77■□□□□ 0.12
HTT-213ENST00000513806 PSME1Q06323 249 aa15.76■□□□□ 0.11
HTT-213ENST00000513806 KRT28Q7Z3Y7 464 aa15.76■□□□□ 0.11
HTT-213ENST00000513806 ILDR1Q86SU0 546 aaPredicted RBP15.76■□□□□ 0.11
HTT-213ENST00000513806 POLR3AO14802 1390 aaPredicted RBP15.75■□□□□ 0.11
HTT-213ENST00000513806 NRKQ7Z2Y5 1582 aa15.75■□□□□ 0.11
HTT-213ENST00000513806 A0A1W2PP64 1363 aa15.75■□□□□ 0.11
HTT-213ENST00000513806 NPHP3Q7Z494 1330 aa15.74■□□□□ 0.11
HTT-213ENST00000513806 CDCA8Q53HL2 280 aa15.74■□□□□ 0.11
HTT-213ENST00000513806 ALS2Q96Q42 1657 aa15.73■□□□□ 0.11
HTT-213ENST00000513806 SOS2Q07890 1332 aaPredicted RBP15.73■□□□□ 0.11
HTT-213ENST00000513806 SLC24A1O60721 1099 aa15.73■□□□□ 0.11
HTT-213ENST00000513806 PAK3O75914 559 aaPredicted RBP15.73■□□□□ 0.11
HTT-213ENST00000513806 PUS7Q96PZ0 661 aaKnown RBP15.73■□□□□ 0.11
HTT-213ENST00000513806 CPSF1Q10570 1443 aaKnown RBP15.73■□□□□ 0.11
HTT-213ENST00000513806 USP6P35125 1406 aa15.72■□□□□ 0.11
HTT-213ENST00000513806 NUTM2GQ5VZR2 741 aa15.72■□□□□ 0.11
HTT-213ENST00000513806 LMOD2Q6P5Q4 547 aa15.72■□□□□ 0.11
HTT-213ENST00000513806 PIK3C2AO00443 1686 aa15.72■□□□□ 0.11
HTT-213ENST00000513806 KTN1Q86UP2 1357 aaKnown RBP15.72■□□□□ 0.11
HTT-213ENST00000513806 MARF1Q9Y4F3 1742 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms