RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 SLIT2O94813 1529 aa18.94■□□□□ 0.62
SFXN1-210ENST00000513725 ONECUT3O60422 494 aaPredicted RBP18.93■□□□□ 0.62
SFXN1-210ENST00000513725 NALCNQ8IZF0 1738 aa18.92■□□□□ 0.62
SFXN1-210ENST00000513725 NINLQ9Y2I6 1382 aa18.91■□□□□ 0.62
SFXN1-210ENST00000513725 RGPD1P0DJD0 1748 aa18.9■□□□□ 0.62
SFXN1-210ENST00000513725 VPS72Q15906 364 aa18.89■□□□□ 0.61
SFXN1-210ENST00000513725 CCDC9Q9Y3X0 531 aaKnown RBP18.89■□□□□ 0.61
SFXN1-210ENST00000513725 A0A0G2JS52 829 aa18.88■□□□□ 0.61
SFXN1-210ENST00000513725 MYT1Q01538 1121 aa18.88■□□□□ 0.61
SFXN1-210ENST00000513725 NPHP3Q7Z494 1330 aa18.88■□□□□ 0.61
SFXN1-210ENST00000513725 DISP2A7MBM2 1401 aa18.87■□□□□ 0.61
SFXN1-210ENST00000513725 EZH2Q15910 746 aaKnown RBP18.86■□□□□ 0.61
SFXN1-210ENST00000513725 SPON1Q9HCB6 807 aa18.84■□□□□ 0.61
SFXN1-210ENST00000513725 METP08581 1390 aa18.83■□□□□ 0.61
SFXN1-210ENST00000513725 CROCC2H7BZ55 1655 aa18.83■□□□□ 0.61
SFXN1-210ENST00000513725 PTPN23Q9H3S7 1636 aa18.83■□□□□ 0.61
SFXN1-210ENST00000513725 CEP350Q5VT06 3117 aa18.82■□□□□ 0.6
SFXN1-210ENST00000513725 ABCC5O15440 1437 aa18.82■□□□□ 0.6
SFXN1-210ENST00000513725 NRXN3Q9Y4C0 1643 aa18.82■□□□□ 0.6
SFXN1-210ENST00000513725 PXDNQ92626 1479 aa18.81■□□□□ 0.6
SFXN1-210ENST00000513725 CAMTA1Q9Y6Y1 1673 aa18.8■□□□□ 0.6
SFXN1-210ENST00000513725 KCNQ2O43526 872 aa18.79■□□□□ 0.6
SFXN1-210ENST00000513725 ESCO1Q5FWF5 840 aa18.79■□□□□ 0.6
SFXN1-210ENST00000513725 CAMKK2Q96RR4 588 aa18.79■□□□□ 0.6
SFXN1-210ENST00000513725 ANKRD30AQ9BXX3 1397 aa18.79■□□□□ 0.6
SFXN1-210ENST00000513725 UTRNP46939 3433 aa18.78■□□□□ 0.6
SFXN1-210ENST00000513725 XPCQ01831 940 aaPredicted RBP18.78■□□□□ 0.6
SFXN1-210ENST00000513725 NBPF8Q3BBV2 869 aa18.78■□□□□ 0.6
SFXN1-210ENST00000513725 NBPF14Q5TI25 921 aa18.78■□□□□ 0.6
SFXN1-210ENST00000513725 LRPPRCP42704 1394 aaKnown RBP18.78■□□□□ 0.6
SFXN1-210ENST00000513725 PARD3Q8TEW0 1356 aa18.78■□□□□ 0.6
SFXN1-210ENST00000513725 ADGRL2O95490 1459 aa18.77■□□□□ 0.6
SFXN1-210ENST00000513725 USP32Q8NFA0 1604 aa18.77■□□□□ 0.6
SFXN1-210ENST00000513725 TNS1Q9HBL0 1735 aaKnown RBP18.77■□□□□ 0.59
SFXN1-210ENST00000513725 ADGRB2O60241 1585 aa18.76■□□□□ 0.59
SFXN1-210ENST00000513725 FOXO3O43524 673 aa18.76■□□□□ 0.59
SFXN1-210ENST00000513725 HAP1P54257 671 aaPredicted RBP18.76■□□□□ 0.59
SFXN1-210ENST00000513725 FAM98CQ17RN3 349 aaKnown RBP18.76■□□□□ 0.59
SFXN1-210ENST00000513725 NWD2Q9ULI1 1742 aa18.75■□□□□ 0.59
SFXN1-210ENST00000513725 FAM182BQ5T319 152 aa18.74■□□□□ 0.59
SFXN1-210ENST00000513725 GIGYF1O75420 1035 aaPredicted RBP18.73■□□□□ 0.59
SFXN1-210ENST00000513725 DAPK1P53355 1430 aa18.73■□□□□ 0.59
SFXN1-210ENST00000513725 CHIC2Q9UKJ5 165 aa18.72■□□□□ 0.59
SFXN1-210ENST00000513725 PLCH1Q4KWH8 1693 aa18.72■□□□□ 0.59
SFXN1-210ENST00000513725 APBA3O96018 575 aa18.71■□□□□ 0.59
SFXN1-210ENST00000513725 IQGAP3Q86VI3 1631 aa18.7■□□□□ 0.58
SFXN1-210ENST00000513725 SPATA31A3Q5VYP0 1347 aa18.7■□□□□ 0.58
SFXN1-210ENST00000513725 CHD4Q14839 1912 aa18.69■□□□□ 0.58
SFXN1-210ENST00000513725 TRIM37O94972 964 aa18.69■□□□□ 0.58
SFXN1-210ENST00000513725 ROBO2Q9HCK4 1378 aa18.67■□□□□ 0.58
SFXN1-210ENST00000513725 ZNF326Q5BKZ1 582 aaKnown RBP18.66■□□□□ 0.58
SFXN1-210ENST00000513725 RREB1Q92766 1687 aa18.66■□□□□ 0.58
SFXN1-210ENST00000513725 FAM196AQ6ZSG2 479 aa18.65■□□□□ 0.58
SFXN1-210ENST00000513725 NUP188Q5SRE5 1749 aa18.65■□□□□ 0.58
SFXN1-210ENST00000513725 E9PCH4 1651 aa18.63■□□□□ 0.57
SFXN1-210ENST00000513725 HFM1A2PYH4 1435 aa18.63■□□□□ 0.57
SFXN1-210ENST00000513725 CABLES1Q8TDN4 633 aa18.62■□□□□ 0.57
SFXN1-210ENST00000513725 CDC42BPGQ6DT37 1551 aa18.61■□□□□ 0.57
SFXN1-210ENST00000513725 CCDC144AA2RUR9 1427 aa18.61■□□□□ 0.57
SFXN1-210ENST00000513725 ANKRD50Q9ULJ7 1429 aa18.61■□□□□ 0.57
SFXN1-210ENST00000513725 FAM83GA6ND36 823 aa18.6■□□□□ 0.57
SFXN1-210ENST00000513725 PLEKHG5O94827 1062 aa18.6■□□□□ 0.57
SFXN1-210ENST00000513725 KRT28Q7Z3Y7 464 aa18.59■□□□□ 0.57
SFXN1-210ENST00000513725 BTG4Q9NY30 223 aa18.59■□□□□ 0.57
SFXN1-210ENST00000513725 NRKQ7Z2Y5 1582 aa18.59■□□□□ 0.57
SFXN1-210ENST00000513725 PRAG1Q86YV5 1406 aa18.57■□□□□ 0.56
SFXN1-210ENST00000513725 NRAPQ86VF7 1730 aa18.57■□□□□ 0.56
SFXN1-210ENST00000513725 KANK4Q5T7N3 995 aaPredicted RBP18.57■□□□□ 0.56
SFXN1-210ENST00000513725 THSD7AQ9UPZ6 1657 aa18.57■□□□□ 0.56
SFXN1-210ENST00000513725 SPATA31A5Q5VU36 1347 aa18.56■□□□□ 0.56
SFXN1-210ENST00000513725 SPATA31A7Q8IWB4 1347 aa18.56■□□□□ 0.56
SFXN1-210ENST00000513725 NUTM2FA1L443 756 aa18.56■□□□□ 0.56
SFXN1-210ENST00000513725 TNS3Q68CZ2 1445 aa18.56■□□□□ 0.56
SFXN1-210ENST00000513725 PSME1Q06323 249 aa18.55■□□□□ 0.56
SFXN1-210ENST00000513725 SYT17Q9BSW7 474 aa18.54■□□□□ 0.56
SFXN1-210ENST00000513725 KIF1AQ12756 1690 aa18.54■□□□□ 0.56
SFXN1-210ENST00000513725 LMOD2Q6P5Q4 547 aa18.53■□□□□ 0.56
SFXN1-210ENST00000513725 ABCA3Q99758 1704 aa18.52■□□□□ 0.56
SFXN1-210ENST00000513725 MYOM1P52179 1685 aa18.52■□□□□ 0.56
SFXN1-210ENST00000513725 NEXMIFQ5QGS0 1516 aa18.52■□□□□ 0.56
SFXN1-210ENST00000513725 FHDC1Q9C0D6 1143 aaPredicted RBP18.51■□□□□ 0.55
SFXN1-210ENST00000513725 ARHGEF10O15013 1369 aa18.51■□□□□ 0.55
SFXN1-210ENST00000513725 NAIPQ13075 1403 aa18.49■□□□□ 0.55
SFXN1-210ENST00000513725 ZBTB7AO95365 584 aa18.49■□□□□ 0.55
SFXN1-210ENST00000513725 PTGER2P43116 358 aa18.49■□□□□ 0.55
SFXN1-210ENST00000513725 COL14A1Q05707 1796 aaKnown RBP18.47■□□□□ 0.55
SFXN1-210ENST00000513725 CASZ1Q86V15 1759 aa18.47■□□□□ 0.55
SFXN1-210ENST00000513725 SBNO1A3KN83 1393 aa18.47■□□□□ 0.55
SFXN1-210ENST00000513725 PDE3BQ13370 1112 aa18.47■□□□□ 0.55
SFXN1-210ENST00000513725 RRBP1Q9P2E9 1410 aaKnown RBP18.47■□□□□ 0.55
SFXN1-210ENST00000513725 DLC1Q96QB1 1528 aa18.46■□□□□ 0.55
SFXN1-210ENST00000513725 VGFO15240 615 aaPredicted RBP18.45■□□□□ 0.54
SFXN1-210ENST00000513725 ATF5Q9Y2D1 282 aaPredicted RBP18.45■□□□□ 0.54
SFXN1-210ENST00000513725 HSPA6P17066 643 aa18.44■□□□□ 0.54
SFXN1-210ENST00000513725 GPR162Q16538 588 aa18.43■□□□□ 0.54
SFXN1-210ENST00000513725 SPATA31A1Q5TZJ5 1347 aa18.43■□□□□ 0.54
SFXN1-210ENST00000513725 PDGFDQ9GZP0 370 aaPredicted RBP18.42■□□□□ 0.54
SFXN1-210ENST00000513725 PHF8Q9UPP1 1060 aa18.42■□□□□ 0.54
SFXN1-210ENST00000513725 ANO8Q9HCE9 1232 aaPredicted RBP18.4■□□□□ 0.54
SFXN1-210ENST00000513725 NUP155O75694 1391 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms