RNA–Protein interactions for RNA: ENST00000513719.1

SNCAIP-218, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 2,303 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-218ENST00000513719 BCANQ96GW7 911 aa17.66■□□□□ 0.42
SNCAIP-218ENST00000513719 ADAMTS8Q9UP79 889 aa17.66■□□□□ 0.42
SNCAIP-218ENST00000513719 ABCC11Q96J66 1382 aa17.65■□□□□ 0.42
SNCAIP-218ENST00000513719 C3P01024 1663 aa17.64■□□□□ 0.42
SNCAIP-218ENST00000513719 BLMP54132 1417 aaPredicted RBP17.64■□□□□ 0.42
SNCAIP-218ENST00000513719 SMG6Q86US8 1419 aaKnown RBP17.64■□□□□ 0.42
SNCAIP-218ENST00000513719 LTKP29376 864 aa17.64■□□□□ 0.41
SNCAIP-218ENST00000513719 SRPK2P78362 688 aaKnown RBP17.64■□□□□ 0.41
SNCAIP-218ENST00000513719 PLPPR3Q6T4P5 718 aa17.64■□□□□ 0.41
SNCAIP-218ENST00000513719 DLC1Q96QB1 1528 aa17.63■□□□□ 0.41
SNCAIP-218ENST00000513719 SALL2Q9Y467 1007 aaPredicted RBP17.63■□□□□ 0.41
SNCAIP-218ENST00000513719 INSRP06213 1382 aa17.63■□□□□ 0.41
SNCAIP-218ENST00000513719 ANKRD36BQ8N2N9 1353 aa17.63■□□□□ 0.41
SNCAIP-218ENST00000513719 NEFLP07196 543 aa17.63■□□□□ 0.41
SNCAIP-218ENST00000513719 IRX6P78412 446 aaPredicted RBP17.62■□□□□ 0.41
SNCAIP-218ENST00000513719 CDK19Q9BWU1 502 aa17.62■□□□□ 0.41
SNCAIP-218ENST00000513719 NLRP1Q9C000 1473 aa17.62■□□□□ 0.41
SNCAIP-218ENST00000513719 DNAJC5Q9H3Z4 198 aa17.61■□□□□ 0.41
SNCAIP-218ENST00000513719 NUDCQ9Y266 331 aa17.61■□□□□ 0.41
SNCAIP-218ENST00000513719 HDGFP51858 240 aaKnown RBP17.61■□□□□ 0.41
SNCAIP-218ENST00000513719 FER1L4A9Z1Z3 1794 aa17.6■□□□□ 0.41
SNCAIP-218ENST00000513719 ADAMTS13Q76LX8 1427 aa17.6■□□□□ 0.41
SNCAIP-218ENST00000513719 A0A1W2PP64 1363 aa17.6■□□□□ 0.41
SNCAIP-218ENST00000513719 TXNDC2Q86VQ3 553 aa17.6■□□□□ 0.41
SNCAIP-218ENST00000513719 CD163L1Q9NR16 1453 aa17.6■□□□□ 0.41
SNCAIP-218ENST00000513719 USP32Q8NFA0 1604 aa17.59■□□□□ 0.41
SNCAIP-218ENST00000513719 MORC1Q86VD1 984 aa17.58■□□□□ 0.41
SNCAIP-218ENST00000513719 ATAD2Q6PL18 1390 aa17.58■□□□□ 0.4
SNCAIP-218ENST00000513719 CGNL1Q0VF96 1302 aa17.57■□□□□ 0.4
SNCAIP-218ENST00000513719 TNNT2P45379 298 aaPredicted RBP17.57■□□□□ 0.4
SNCAIP-218ENST00000513719 NINLQ9Y2I6 1382 aa17.57■□□□□ 0.4
SNCAIP-218ENST00000513719 WDR43Q15061 677 aaKnown RBP eCLIP17.56■□□□□ 0.4
SNCAIP-218ENST00000513719 CABP1Q9NZU7 370 aa17.56■□□□□ 0.4
SNCAIP-218ENST00000513719 TECPR2O15040 1411 aa17.56■□□□□ 0.4
SNCAIP-218ENST00000513719 PLEKHG1Q9ULL1 1385 aa17.55■□□□□ 0.4
SNCAIP-218ENST00000513719 CDCA7LQ96GN5 454 aa17.55■□□□□ 0.4
SNCAIP-218ENST00000513719 ARHGAP23Q9P227 1491 aa17.54■□□□□ 0.4
SNCAIP-218ENST00000513719 SIRT1Q96EB6 747 aa17.54■□□□□ 0.4
SNCAIP-218ENST00000513719 MED14O60244 1454 aa17.53■□□□□ 0.4
SNCAIP-218ENST00000513719 POLR3AO14802 1390 aaPredicted RBP17.53■□□□□ 0.4
SNCAIP-218ENST00000513719 SLIT1O75093 1534 aa17.53■□□□□ 0.4
SNCAIP-218ENST00000513719 FAM135BQ49AJ0 1406 aa17.53■□□□□ 0.4
SNCAIP-218ENST00000513719 SLC26A8Q96RN1 970 aa17.53■□□□□ 0.4
SNCAIP-218ENST00000513719 ROBO2Q9HCK4 1378 aa17.52■□□□□ 0.4
SNCAIP-218ENST00000513719 WASLO00401 505 aaPredicted RBP17.52■□□□□ 0.4
SNCAIP-218ENST00000513719 KNDC1Q76NI1 1749 aa17.52■□□□□ 0.39
SNCAIP-218ENST00000513719 RNF123Q5XPI4 1314 aa17.51■□□□□ 0.39
SNCAIP-218ENST00000513719 FYB1O15117 783 aa17.51■□□□□ 0.39
SNCAIP-218ENST00000513719 CCDC146Q8IYE0 955 aa17.51■□□□□ 0.39
SNCAIP-218ENST00000513719 TERF2IPQ9NYB0 399 aa17.51■□□□□ 0.39
SNCAIP-218ENST00000513719 CPS1P31327 1500 aa17.51■□□□□ 0.39
SNCAIP-218ENST00000513719 PTPRUQ92729 1446 aa17.51■□□□□ 0.39
SNCAIP-218ENST00000513719 GGNBP2Q9H3C7 697 aa17.5■□□□□ 0.39
SNCAIP-218ENST00000513719 NSD2O96028 1365 aa17.5■□□□□ 0.39
SNCAIP-218ENST00000513719 MTHFSP49914 203 aa17.5■□□□□ 0.39
SNCAIP-218ENST00000513719 PDE3BQ13370 1112 aa17.5■□□□□ 0.39
SNCAIP-218ENST00000513719 EID1Q9Y6B2 187 aa17.49■□□□□ 0.39
SNCAIP-218ENST00000513719 NCKAP5LQ9HCH0 1330 aa17.49■□□□□ 0.39
SNCAIP-218ENST00000513719 THEMISQ8N1K5 641 aaPredicted RBP17.48■□□□□ 0.39
SNCAIP-218ENST00000513719 ZNF521Q96K83 1311 aa17.48■□□□□ 0.39
SNCAIP-218ENST00000513719 SHPRHQ149N8 1683 aa17.47■□□□□ 0.39
SNCAIP-218ENST00000513719 HDGFL2Q7Z4V5 671 aaPredicted RBP17.47■□□□□ 0.39
SNCAIP-218ENST00000513719 RIMS1Q86UR5 1692 aaKnown RBP17.46■□□□□ 0.39
SNCAIP-218ENST00000513719 NUDT16Q96DE0 195 aaKnown RBP17.46■□□□□ 0.38
SNCAIP-218ENST00000513719 PRR36Q9H6K5 1346 aa17.45■□□□□ 0.38
SNCAIP-218ENST00000513719 APAF1O14727 1248 aa17.45■□□□□ 0.38
SNCAIP-218ENST00000513719 TBX22Q9Y458 520 aa17.45■□□□□ 0.38
SNCAIP-218ENST00000513719 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.45■□□□□ 0.38
SNCAIP-218ENST00000513719 ATP7BP35670 1465 aa17.44■□□□□ 0.38
SNCAIP-218ENST00000513719 CPSF1Q10570 1443 aaKnown RBP17.44■□□□□ 0.38
SNCAIP-218ENST00000513719 PPIP5K1Q6PFW1 1433 aa17.44■□□□□ 0.38
SNCAIP-218ENST00000513719 ERICH6BQ5W0A0 696 aa17.43■□□□□ 0.38
SNCAIP-218ENST00000513719 AMOTL2Q9Y2J4 779 aa17.43■□□□□ 0.38
SNCAIP-218ENST00000513719 ADAMTSL3P82987 1691 aa17.42■□□□□ 0.38
SNCAIP-218ENST00000513719 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.42■□□□□ 0.38
SNCAIP-218ENST00000513719 CEP170BQ9Y4F5 1589 aaPredicted RBP17.42■□□□□ 0.38
SNCAIP-218ENST00000513719 CCDC61Q9Y6R9 512 aa17.42■□□□□ 0.38
SNCAIP-218ENST00000513719 RCAN3Q9UKA8 241 aa17.41■□□□□ 0.38
SNCAIP-218ENST00000513719 ANKRD26Q9UPS8 1709 aa17.4■□□□□ 0.38
SNCAIP-218ENST00000513719 FBLN1P23142 703 aa17.4■□□□□ 0.38
SNCAIP-218ENST00000513719 SPINK5Q9NQ38 1064 aaPredicted RBP17.39■□□□□ 0.38
SNCAIP-218ENST00000513719 DUSP27Q5VZP5 1158 aa17.39■□□□□ 0.37
SNCAIP-218ENST00000513719 ADGRB2O60241 1585 aa17.38■□□□□ 0.37
SNCAIP-218ENST00000513719 PPP4R2Q9NY27 417 aa17.38■□□□□ 0.37
SNCAIP-218ENST00000513719 ZRANB1Q9UGI0 708 aa17.38■□□□□ 0.37
SNCAIP-218ENST00000513719 DMRT2Q9Y5R5 561 aa17.38■□□□□ 0.37
SNCAIP-218ENST00000513719 CFAP53Q96M91 514 aa17.38■□□□□ 0.37
SNCAIP-218ENST00000513719 COL3A1P02461 1466 aaPredicted RBP17.38■□□□□ 0.37
SNCAIP-218ENST00000513719 NUTM2FA1L443 756 aa17.37■□□□□ 0.37
SNCAIP-218ENST00000513719 GOLGA2Q08379 1002 aa17.37■□□□□ 0.37
SNCAIP-218ENST00000513719 CDC42BPGQ6DT37 1551 aa17.37■□□□□ 0.37
SNCAIP-218ENST00000513719 KIF20BQ96Q89 1820 aa17.37■□□□□ 0.37
SNCAIP-218ENST00000513719 NME9Q86XW9 330 aa17.37■□□□□ 0.37
SNCAIP-218ENST00000513719 EDC4Q6P2E9 1401 aaKnown RBP17.36■□□□□ 0.37
SNCAIP-218ENST00000513719 RRP1P56182 461 aaKnown RBP17.36■□□□□ 0.37
SNCAIP-218ENST00000513719 SLFN5Q08AF3 891 aa17.36■□□□□ 0.37
SNCAIP-218ENST00000513719 TRMT2AQ8IZ69 625 aaKnown RBP17.36■□□□□ 0.37
SNCAIP-218ENST00000513719 RUNDC1Q96C34 613 aa17.35■□□□□ 0.37
SNCAIP-218ENST00000513719 PTCH1Q13635 1447 aa17.35■□□□□ 0.37
SNCAIP-218ENST00000513719 DIP2AQ14689 1571 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms