RNA–Protein interactions for RNA: ENST00000513595.1

FOXD1-201, Transcript of forkhead box D1, humanhuman

TSL 3

Gene FOXD1, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD1-201ENST00000513595 RIMS2Q9UQ26 1411 aa19.67■□□□□ 0.74
FOXD1-201ENST00000513595 ANKRD30AQ9BXX3 1397 aa19.66■□□□□ 0.74
FOXD1-201ENST00000513595 BLMP54132 1417 aaPredicted RBP19.66■□□□□ 0.74
FOXD1-201ENST00000513595 NAIPQ13075 1403 aa19.66■□□□□ 0.74
FOXD1-201ENST00000513595 CHIC2Q9UKJ5 165 aa19.65■□□□□ 0.74
FOXD1-201ENST00000513595 RAB3GAP2Q9H2M9 1393 aa19.65■□□□□ 0.74
FOXD1-201ENST00000513595 DCCP43146 1447 aa19.65■□□□□ 0.74
FOXD1-201ENST00000513595 GCC2Q8IWJ2 1684 aa19.65■□□□□ 0.74
FOXD1-201ENST00000513595 SF3B2Q13435 895 aaKnown RBP19.64■□□□□ 0.73
FOXD1-201ENST00000513595 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.64■□□□□ 0.73
FOXD1-201ENST00000513595 DDX17Q92841 729 aaKnown RBP19.64■□□□□ 0.73
FOXD1-201ENST00000513595 ACIN1Q9UKV3 1341 aaKnown RBP19.64■□□□□ 0.73
FOXD1-201ENST00000513595 ADAMTS13Q76LX8 1427 aa19.64■□□□□ 0.73
FOXD1-201ENST00000513595 NHSL1Q5SYE7 1610 aa19.64■□□□□ 0.73
FOXD1-201ENST00000513595 ATRNO75882 1429 aa19.63■□□□□ 0.73
FOXD1-201ENST00000513595 AMOTL2Q9Y2J4 779 aa19.63■□□□□ 0.73
FOXD1-201ENST00000513595 FNBP4Q8N3X1 1017 aaPredicted RBP19.62■□□□□ 0.73
FOXD1-201ENST00000513595 MST1RQ04912 1400 aa19.6■□□□□ 0.73
FOXD1-201ENST00000513595 PTPRUQ92729 1446 aa19.56■□□□□ 0.72
FOXD1-201ENST00000513595 CCER1Q8TC90 406 aaPredicted RBP19.55■□□□□ 0.72
FOXD1-201ENST00000513595 RPRD2Q5VT52 1461 aaKnown RBP19.54■□□□□ 0.72
FOXD1-201ENST00000513595 PTCH1Q13635 1447 aa19.53■□□□□ 0.72
FOXD1-201ENST00000513595 RBM42Q9BTD8 480 aaKnown RBP19.53■□□□□ 0.72
FOXD1-201ENST00000513595 TMEM131LA2VDJ0 1609 aa19.53■□□□□ 0.72
FOXD1-201ENST00000513595 SENP3-EIF4A1A0A087X0R7 540 aa19.52■□□□□ 0.72
FOXD1-201ENST00000513595 BCL9LQ86UU0 1499 aa19.52■□□□□ 0.72
FOXD1-201ENST00000513595 ANKRD50Q9ULJ7 1429 aa19.51■□□□□ 0.71
FOXD1-201ENST00000513595 TRPM2O94759 1503 aa19.51■□□□□ 0.71
FOXD1-201ENST00000513595 GJD4Q96KN9 370 aaPredicted RBP19.51■□□□□ 0.71
FOXD1-201ENST00000513595 DHX57Q6P158 1386 aaKnown RBP19.5■□□□□ 0.71
FOXD1-201ENST00000513595 CHGAP10645 457 aaKnown RBP19.5■□□□□ 0.71
FOXD1-201ENST00000513595 CLSPNQ9HAW4 1339 aa19.5■□□□□ 0.71
FOXD1-201ENST00000513595 SOS2Q07890 1332 aaPredicted RBP19.49■□□□□ 0.71
FOXD1-201ENST00000513595 MYO5BQ9ULV0 1848 aa19.47■□□□□ 0.71
FOXD1-201ENST00000513595 ZEB1P37275 1124 aaPredicted RBP19.46■□□□□ 0.71
FOXD1-201ENST00000513595 R3HDM1Q15032 1099 aaKnown RBP19.46■□□□□ 0.71
FOXD1-201ENST00000513595 UNC13BO14795 1591 aa19.45■□□□□ 0.7
FOXD1-201ENST00000513595 BAG6P46379 1132 aa19.44■□□□□ 0.7
FOXD1-201ENST00000513595 ADGRL3Q9HAR2 1447 aa19.43■□□□□ 0.7
FOXD1-201ENST00000513595 C1orf167Q5SNV9 1468 aa19.43■□□□□ 0.7
FOXD1-201ENST00000513595 XRN1Q8IZH2 1706 aaKnown RBP19.41■□□□□ 0.7
FOXD1-201ENST00000513595 LAMC1P11047 1609 aa19.4■□□□□ 0.7
FOXD1-201ENST00000513595 RALGAPBQ86X10 1494 aa19.4■□□□□ 0.7
FOXD1-201ENST00000513595 ORAI2Q96SN7 254 aa19.39■□□□□ 0.69
FOXD1-201ENST00000513595 METP08581 1390 aa19.38■□□□□ 0.69
FOXD1-201ENST00000513595 GLI3P10071 1580 aa19.38■□□□□ 0.69
FOXD1-201ENST00000513595 BRWD3Q6RI45 1802 aa19.38■□□□□ 0.69
FOXD1-201ENST00000513595 SEPT12Q8IYM1 358 aa19.38■□□□□ 0.69
FOXD1-201ENST00000513595 MYOM2P54296 1465 aa19.37■□□□□ 0.69
FOXD1-201ENST00000513595 SPHKAPQ2M3C7 1700 aa19.36■□□□□ 0.69
FOXD1-201ENST00000513595 COL22A1Q8NFW1 1626 aaPredicted RBP19.36■□□□□ 0.69
FOXD1-201ENST00000513595 UNC5CLQ8IV45 518 aa19.35■□□□□ 0.69
FOXD1-201ENST00000513595 EN1Q05925 392 aaPredicted RBP19.34■□□□□ 0.69
FOXD1-201ENST00000513595 KRT27Q7Z3Y8 459 aa19.33■□□□□ 0.68
FOXD1-201ENST00000513595 MPHOSPH9Q99550 1183 aa19.33■□□□□ 0.68
FOXD1-201ENST00000513595 NUP155O75694 1391 aa19.32■□□□□ 0.68
FOXD1-201ENST00000513595 ATXN8OSP0DMR3 200 aa19.31■□□□□ 0.68
FOXD1-201ENST00000513595 NRXN3Q9Y4C0 1643 aa19.31■□□□□ 0.68
FOXD1-201ENST00000513595 ZNF784Q8NCA9 323 aaPredicted RBP19.3■□□□□ 0.68
FOXD1-201ENST00000513595 NALCNQ8IZF0 1738 aa19.29■□□□□ 0.68
FOXD1-201ENST00000513595 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.29■□□□□ 0.68
FOXD1-201ENST00000513595 A0A0G2JS52 829 aa19.29■□□□□ 0.68
FOXD1-201ENST00000513595 ONECUT3O60422 494 aaPredicted RBP19.29■□□□□ 0.68
FOXD1-201ENST00000513595 MYT1Q01538 1121 aa19.29■□□□□ 0.68
FOXD1-201ENST00000513595 PPP1R1BQ9UD71 204 aaPredicted RBP19.29■□□□□ 0.68
FOXD1-201ENST00000513595 ZBTB12Q9Y330 459 aaPredicted RBP19.29■□□□□ 0.68
FOXD1-201ENST00000513595 MARF1Q9Y4F3 1742 aaKnown RBP19.28■□□□□ 0.68
FOXD1-201ENST00000513595 C1QTNF8P60827 252 aa19.28■□□□□ 0.68
FOXD1-201ENST00000513595 CCDC9Q9Y3X0 531 aaKnown RBP19.28■□□□□ 0.68
FOXD1-201ENST00000513595 NPHP3Q7Z494 1330 aa19.27■□□□□ 0.68
FOXD1-201ENST00000513595 SLIT2O94813 1529 aa19.27■□□□□ 0.68
FOXD1-201ENST00000513595 IQGAP3Q86VI3 1631 aa19.27■□□□□ 0.68
FOXD1-201ENST00000513595 VPS72Q15906 364 aa19.23■□□□□ 0.67
FOXD1-201ENST00000513595 PXDNQ92626 1479 aa19.22■□□□□ 0.67
FOXD1-201ENST00000513595 ZNF326Q5BKZ1 582 aaKnown RBP19.22■□□□□ 0.67
FOXD1-201ENST00000513595 ESCO1Q5FWF5 840 aa19.22■□□□□ 0.67
FOXD1-201ENST00000513595 CEP350Q5VT06 3117 aa19.21■□□□□ 0.67
FOXD1-201ENST00000513595 E9PCH4 1651 aa19.21■□□□□ 0.67
FOXD1-201ENST00000513595 FOXO3O43524 673 aa19.21■□□□□ 0.67
FOXD1-201ENST00000513595 XPCQ01831 940 aaPredicted RBP19.21■□□□□ 0.67
FOXD1-201ENST00000513595 EZH2Q15910 746 aaKnown RBP19.21■□□□□ 0.67
FOXD1-201ENST00000513595 ROBO2Q9HCK4 1378 aa19.2■□□□□ 0.66
FOXD1-201ENST00000513595 ANKRD30BQ9BXX2 1392 aa19.19■□□□□ 0.66
FOXD1-201ENST00000513595 CHRDL2Q6WN34 429 aa19.19■□□□□ 0.66
FOXD1-201ENST00000513595 TIMELESSQ9UNS1 1208 aa19.19■□□□□ 0.66
FOXD1-201ENST00000513595 UTRNP46939 3433 aa19.18■□□□□ 0.66
FOXD1-201ENST00000513595 LRPPRCP42704 1394 aaKnown RBP19.18■□□□□ 0.66
FOXD1-201ENST00000513595 NINLQ9Y2I6 1382 aa19.18■□□□□ 0.66
FOXD1-201ENST00000513595 RGPD1P0DJD0 1748 aa19.17■□□□□ 0.66
FOXD1-201ENST00000513595 FAM182BQ5T319 152 aa19.16■□□□□ 0.66
FOXD1-201ENST00000513595 CAMTA1Q9Y6Y1 1673 aa19.16■□□□□ 0.66
FOXD1-201ENST00000513595 AKT1S1Q96B36 256 aa19.14■□□□□ 0.65
FOXD1-201ENST00000513595 SPON1Q9HCB6 807 aa19.14■□□□□ 0.65
FOXD1-201ENST00000513595 SPATA31A3Q5VYP0 1347 aa19.14■□□□□ 0.65
FOXD1-201ENST00000513595 PRAG1Q86YV5 1406 aa19.14■□□□□ 0.65
FOXD1-201ENST00000513595 HAP1P54257 671 aaPredicted RBP19.13■□□□□ 0.65
FOXD1-201ENST00000513595 SIN3AQ96ST3 1273 aa19.13■□□□□ 0.65
FOXD1-201ENST00000513595 DISP2A7MBM2 1401 aa19.13■□□□□ 0.65
FOXD1-201ENST00000513595 FAM98CQ17RN3 349 aaKnown RBP19.12■□□□□ 0.65
FOXD1-201ENST00000513595 NEUROD1Q13562 356 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms