RNA–Protein interactions for RNA: ENST00000513448.5

PROM1-215, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-215ENST00000513448 TMEM132EQ6IEE7 984 aa12.22□□□□□ -0.45
PROM1-215ENST00000513448 MORC1Q86VD1 984 aa12.22□□□□□ -0.45
PROM1-215ENST00000513448 ANKRD36BQ8N2N9 1353 aa12.22□□□□□ -0.45
PROM1-215ENST00000513448 AGLP35573 1532 aa12.22□□□□□ -0.45
PROM1-215ENST00000513448 MSH5O43196 834 aa12.21□□□□□ -0.45
PROM1-215ENST00000513448 TMEM131LA2VDJ0 1609 aa12.21□□□□□ -0.45
PROM1-215ENST00000513448 SLC12A5Q9H2X9 1139 aa12.21□□□□□ -0.46
PROM1-215ENST00000513448 NKTRP30414 1462 aaKnown RBP12.21□□□□□ -0.46
PROM1-215ENST00000513448 APAF1O14727 1248 aa12.2□□□□□ -0.46
PROM1-215ENST00000513448 CYB5RLQ6IPT4 315 aa12.19□□□□□ -0.46
PROM1-215ENST00000513448 CFAP53Q96M91 514 aa12.19□□□□□ -0.46
PROM1-215ENST00000513448 TULP4Q9NRJ4 1543 aa12.19□□□□□ -0.46
PROM1-215ENST00000513448 ERICH6Q7L0X2 663 aa12.18□□□□□ -0.46
PROM1-215ENST00000513448 DIP2BQ9P265 1576 aa12.18□□□□□ -0.46
PROM1-215ENST00000513448 ATAD2Q6PL18 1390 aa12.18□□□□□ -0.46
PROM1-215ENST00000513448 RUNDC1Q96C34 613 aa12.18□□□□□ -0.46
PROM1-215ENST00000513448 CRBNQ96SW2 442 aa12.18□□□□□ -0.46
PROM1-215ENST00000513448 PLIN1O60240 522 aa12.17□□□□□ -0.46
PROM1-215ENST00000513448 ANP32AP39687 249 aaKnown RBP12.17□□□□□ -0.46
PROM1-215ENST00000513448 FAM69CQ0P6D2 419 aa12.17□□□□□ -0.46
PROM1-215ENST00000513448 CCDC27Q2M243 656 aa12.16□□□□□ -0.46
PROM1-215ENST00000513448 CCDC146Q8IYE0 955 aa12.16□□□□□ -0.46
PROM1-215ENST00000513448 SHPRHQ149N8 1683 aa12.15□□□□□ -0.46
PROM1-215ENST00000513448 MED14O60244 1454 aa12.15□□□□□ -0.46
PROM1-215ENST00000513448 CENPQQ7L2Z9 268 aaPredicted RBP12.15□□□□□ -0.46
PROM1-215ENST00000513448 WWC1Q8IX03 1113 aa12.15□□□□□ -0.46
PROM1-215ENST00000513448 ABCC11Q96J66 1382 aa12.15□□□□□ -0.46
PROM1-215ENST00000513448 RIMBP3CA6NJZ7 1639 aa12.15□□□□□ -0.46
PROM1-215ENST00000513448 RIMBP3BA6NNM3 1639 aa12.15□□□□□ -0.46
PROM1-215ENST00000513448 RIMBP3Q9UFD9 1639 aa12.15□□□□□ -0.46
PROM1-215ENST00000513448 PTPRMP28827 1452 aa12.15□□□□□ -0.46
PROM1-215ENST00000513448 YTHDC2Q9H6S0 1430 aaKnown RBP12.15□□□□□ -0.47
PROM1-215ENST00000513448 WDR63Q8IWG1 891 aa12.15□□□□□ -0.47
PROM1-215ENST00000513448 CLTCQ00610 1675 aaKnown RBP12.14□□□□□ -0.47
PROM1-215ENST00000513448 TERF2IPQ9NYB0 399 aa12.14□□□□□ -0.47
PROM1-215ENST00000513448 KDM2BQ8NHM5 1336 aa12.14□□□□□ -0.47
PROM1-215ENST00000513448 MTHFSP49914 203 aa12.13□□□□□ -0.47
PROM1-215ENST00000513448 AAMPQ13685 434 aa12.13□□□□□ -0.47
PROM1-215ENST00000513448 PDE3AQ14432 1141 aa12.13□□□□□ -0.47
PROM1-215ENST00000513448 MYO5BQ9ULV0 1848 aa12.13□□□□□ -0.47
PROM1-215ENST00000513448 IPO9Q96P70 1041 aaKnown RBP12.13□□□□□ -0.47
PROM1-215ENST00000513448 SPATA31D1Q6ZQQ2 1576 aa12.13□□□□□ -0.47
PROM1-215ENST00000513448 IQSEC2Q5JU85 1478 aa12.12□□□□□ -0.47
PROM1-215ENST00000513448 NUTM2DQ5VT03 806 aaPredicted RBP12.12□□□□□ -0.47
PROM1-215ENST00000513448 BACH2Q9BYV9 841 aa12.12□□□□□ -0.47
PROM1-215ENST00000513448 ALKQ9UM73 1620 aa12.12□□□□□ -0.47
PROM1-215ENST00000513448 DLC1Q96QB1 1528 aa12.12□□□□□ -0.47
PROM1-215ENST00000513448 PDE4AP27815 886 aa12.11□□□□□ -0.47
PROM1-215ENST00000513448 C20orf194Q5TEA3 1177 aa12.11□□□□□ -0.47
PROM1-215ENST00000513448 CABP2Q9NPB3 220 aa12.11□□□□□ -0.47
PROM1-215ENST00000513448 SPINK5Q9NQ38 1064 aaPredicted RBP12.11□□□□□ -0.47
PROM1-215ENST00000513448 NOP58Q9Y2X3 529 aaKnown RBP12.11□□□□□ -0.47
PROM1-215ENST00000513448 A0A1W2PP64 1363 aa12.11□□□□□ -0.47
PROM1-215ENST00000513448 SRPK2P78362 688 aaKnown RBP12.11□□□□□ -0.47
PROM1-215ENST00000513448 POGKQ9P215 609 aa12.11□□□□□ -0.47
PROM1-215ENST00000513448 STAG3Q9UJ98 1225 aa12.11□□□□□ -0.47
PROM1-215ENST00000513448 TCP11L2Q8N4U5 519 aa12.1□□□□□ -0.47
PROM1-215ENST00000513448 FBXO31Q5XUX0 539 aaPredicted RBP12.1□□□□□ -0.47
PROM1-215ENST00000513448 PRAM1Q96QH2 718 aa12.1□□□□□ -0.47
PROM1-215ENST00000513448 CT47B1P0C2W7 299 aaPredicted RBP12.09□□□□□ -0.47
PROM1-215ENST00000513448 A2ML1A8K2U0 1454 aa12.09□□□□□ -0.47
PROM1-215ENST00000513448 ARHGEF40Q8TER5 1519 aa12.09□□□□□ -0.47
PROM1-215ENST00000513448 ANKRD26Q9UPS8 1709 aa12.09□□□□□ -0.47
PROM1-215ENST00000513448 HDGFL2Q7Z4V5 671 aaPredicted RBP12.08□□□□□ -0.48
PROM1-215ENST00000513448 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.08□□□□□ -0.48
PROM1-215ENST00000513448 PNNQ9H307 717 aaKnown RBP12.08□□□□□ -0.48
PROM1-215ENST00000513448 STK26Q9P289 416 aa12.08□□□□□ -0.48
PROM1-215ENST00000513448 TNNT2P45379 298 aaPredicted RBP12.08□□□□□ -0.48
PROM1-215ENST00000513448 MYH16Q9H6N6 1097 aa12.08□□□□□ -0.48
PROM1-215ENST00000513448 HDGFP51858 240 aaKnown RBP12.07□□□□□ -0.48
PROM1-215ENST00000513448 ADGRB2O60241 1585 aa12.07□□□□□ -0.48
PROM1-215ENST00000513448 CD163L1Q9NR16 1453 aa12.07□□□□□ -0.48
PROM1-215ENST00000513448 SIRT1Q96EB6 747 aa12.06□□□□□ -0.48
PROM1-215ENST00000513448 ZBTB47Q9UFB7 747 aaPredicted RBP12.06□□□□□ -0.48
PROM1-215ENST00000513448 RIMS2Q9UQ26 1411 aa12.06□□□□□ -0.48
PROM1-215ENST00000513448 FYB1O15117 783 aa12.06□□□□□ -0.48
PROM1-215ENST00000513448 BCAR3O75815 825 aa12.06□□□□□ -0.48
PROM1-215ENST00000513448 SAFB2Q14151 953 aaKnown RBP eCLIP12.06□□□□□ -0.48
PROM1-215ENST00000513448 DMRT2Q9Y5R5 561 aa12.06□□□□□ -0.48
PROM1-215ENST00000513448 PNPLA6Q8IY17 1366 aa12.06□□□□□ -0.48
PROM1-215ENST00000513448 ATP7BP35670 1465 aa12.06□□□□□ -0.48
PROM1-215ENST00000513448 NLRP1Q9C000 1473 aa12.06□□□□□ -0.48
PROM1-215ENST00000513448 U2AF1L5P0DN76 240 aaPredicted RBP12.05□□□□□ -0.48
PROM1-215ENST00000513448 U2AF1Q01081 240 aaKnown RBP eCLIP12.05□□□□□ -0.48
PROM1-215ENST00000513448 CDK19Q9BWU1 502 aa12.05□□□□□ -0.48
PROM1-215ENST00000513448 MINK1Q8N4C8 1332 aaPredicted RBP12.05□□□□□ -0.48
PROM1-215ENST00000513448 TSPOAP1O95153 1857 aa12.05□□□□□ -0.48
PROM1-215ENST00000513448 COL3A1P02461 1466 aaPredicted RBP12.04□□□□□ -0.48
PROM1-215ENST00000513448 IL16Q14005 1332 aa12.04□□□□□ -0.48
PROM1-215ENST00000513448 RARSP54136 660 aaKnown RBP12.04□□□□□ -0.48
PROM1-215ENST00000513448 SETD1AO15047 1707 aaKnown RBP12.03□□□□□ -0.48
PROM1-215ENST00000513448 PLEKHF1Q96S99 279 aa12.03□□□□□ -0.48
PROM1-215ENST00000513448 CANXP27824 592 aaKnown RBP12.02□□□□□ -0.49
PROM1-215ENST00000513448 NEUROD2Q15784 382 aa12.02□□□□□ -0.49
PROM1-215ENST00000513448 CLUAP1Q96AJ1 413 aa12.02□□□□□ -0.49
PROM1-215ENST00000513448 GGNBP2Q9H3C7 697 aa12.02□□□□□ -0.49
PROM1-215ENST00000513448 ESF1Q9H501 851 aaKnown RBP12.02□□□□□ -0.49
PROM1-215ENST00000513448 FAM135BQ49AJ0 1406 aa12.02□□□□□ -0.49
PROM1-215ENST00000513448 DDRGK1Q96HY6 314 aa12.01□□□□□ -0.49
PROM1-215ENST00000513448 CABP1Q9NZU7 370 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms