RNA–Protein interactions for RNA: ENST00000513316.1

RAB3C-204, Transcript of RAB3C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB3C, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-204ENST00000513316 FMNL1O95466 1100 aaPredicted RBP11.2□□□□□ -0.62
RAB3C-204ENST00000513316 PROCA1Q8NCQ7 364 aaPredicted RBP11.2□□□□□ -0.62
RAB3C-204ENST00000513316 ZBTB3Q9H5J0 574 aa11.2□□□□□ -0.62
RAB3C-204ENST00000513316 ATP1B4Q9UN42 357 aaPredicted RBP11.2□□□□□ -0.62
RAB3C-204ENST00000513316 MTMR2Q13614 643 aa11.19□□□□□ -0.62
RAB3C-204ENST00000513316 BRICD5Q6PL45 260 aa11.19□□□□□ -0.62
RAB3C-204ENST00000513316 PCDHB15Q9Y5E8 787 aa11.19□□□□□ -0.62
RAB3C-204ENST00000513316 LILRB3O75022 631 aa11.18□□□□□ -0.62
RAB3C-204ENST00000513316 KCNC4Q03721 635 aa11.18□□□□□ -0.62
RAB3C-204ENST00000513316 THAP11Q96EK4 314 aa11.18□□□□□ -0.62
RAB3C-204ENST00000513316 C6orf229H3BNL8 230 aa11.17□□□□□ -0.62
RAB3C-204ENST00000513316 HRCP23327 699 aa11.17□□□□□ -0.62
RAB3C-204ENST00000513316 CSPP1Q1MSJ5 1256 aa11.17□□□□□ -0.62
RAB3C-204ENST00000513316 PPP2R2DQ66LE6 453 aa11.17□□□□□ -0.62
RAB3C-204ENST00000513316 RETREG3Q86VR2 466 aa11.17□□□□□ -0.62
RAB3C-204ENST00000513316 NUTM2BA6NNL0 878 aaPredicted RBP11.15□□□□□ -0.62
RAB3C-204ENST00000513316 NUTM2EB1AL46 878 aaPredicted RBP11.15□□□□□ -0.62
RAB3C-204ENST00000513316 QPCTQ16769 361 aa11.15□□□□□ -0.62
RAB3C-204ENST00000513316 NUTM2DQ5VT03 806 aaPredicted RBP11.15□□□□□ -0.62
RAB3C-204ENST00000513316 RNF19BQ6ZMZ0 732 aa11.15□□□□□ -0.62
RAB3C-204ENST00000513316 NUTM2AQ8IVF1 878 aaPredicted RBP11.15□□□□□ -0.62
RAB3C-204ENST00000513316 ZNF516Q92618 1163 aa11.15□□□□□ -0.62
RAB3C-204ENST00000513316 SPSB2Q99619 263 aa11.15□□□□□ -0.62
RAB3C-204ENST00000513316 USB1Q9BQ65 265 aaKnown RBP11.15□□□□□ -0.62
RAB3C-204ENST00000513316 ADH1BP00325 375 aa11.14□□□□□ -0.63
RAB3C-204ENST00000513316 MSS51Q4VC12 460 aa11.13□□□□□ -0.63
RAB3C-204ENST00000513316 IFFO2Q5TF58 517 aa11.13□□□□□ -0.63
RAB3C-204ENST00000513316 CABLES1Q8TDN4 633 aa11.12□□□□□ -0.63
RAB3C-204ENST00000513316 SYMPKQ92797 1274 aaKnown RBP11.12□□□□□ -0.63
RAB3C-204ENST00000513316 TLL1O43897 1013 aa11.1□□□□□ -0.63
RAB3C-204ENST00000513316 RTL5Q5HYW3 569 aaPredicted RBP11.1□□□□□ -0.63
RAB3C-204ENST00000513316 DESI1Q6ICB0 168 aa11.1□□□□□ -0.63
RAB3C-204ENST00000513316 RFC5P40937 340 aa11.09□□□□□ -0.63
RAB3C-204ENST00000513316 PRR7Q8TB68 274 aa11.09□□□□□ -0.63
RAB3C-204ENST00000513316 PLSCR2Q9NRY7 297 aa11.09□□□□□ -0.63
RAB3C-204ENST00000513316 TMEM259Q4ZIN3 620 aa11.08□□□□□ -0.64
RAB3C-204ENST00000513316 FAM160A2Q8N612 972 aaPredicted RBP11.08□□□□□ -0.64
RAB3C-204ENST00000513316 HELBQ8NG08 1087 aaPredicted RBP11.08□□□□□ -0.64
RAB3C-204ENST00000513316 FBXO31Q5XUX0 539 aaPredicted RBP11.07□□□□□ -0.64
RAB3C-204ENST00000513316 SLC6A16Q9GZN6 736 aa11.07□□□□□ -0.64
RAB3C-204ENST00000513316 CFAP99D6REC4 459 aa11.06□□□□□ -0.64
RAB3C-204ENST00000513316 NKX2-3Q8TAU0 364 aa11.06□□□□□ -0.64
RAB3C-204ENST00000513316 JUNDP17535 347 aa11.05□□□□□ -0.64
RAB3C-204ENST00000513316 MMP16P51512 607 aa11.05□□□□□ -0.64
RAB3C-204ENST00000513316 PLA2G2EQ9NZK7 142 aa11.05□□□□□ -0.64
RAB3C-204ENST00000513316 DXOO77932 396 aaKnown RBP11.04□□□□□ -0.64
RAB3C-204ENST00000513316 GGCXP38435 758 aa11.04□□□□□ -0.64
RAB3C-204ENST00000513316 BANK1Q8NDB2 785 aa11.04□□□□□ -0.64
RAB3C-204ENST00000513316 AP1G2O75843 785 aa11.01□□□□□ -0.65
RAB3C-204ENST00000513316 S1PR4O95977 384 aa11.01□□□□□ -0.65
RAB3C-204ENST00000513316 LYPD8Q6UX82 237 aa11.01□□□□□ -0.65
RAB3C-204ENST00000513316 TSC1Q92574 1164 aa11.01□□□□□ -0.65
RAB3C-204ENST00000513316 PRDM9Q9NQV7 894 aa11.01□□□□□ -0.65
RAB3C-204ENST00000513316 GTF3C3Q9Y5Q9 886 aa11.01□□□□□ -0.65
RAB3C-204ENST00000513316 PTPRNQ16849 979 aa11□□□□□ -0.65
RAB3C-204ENST00000513316 SOCS7O14512 581 aa10.99□□□□□ -0.65
RAB3C-204ENST00000513316 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.99□□□□□ -0.65
RAB3C-204ENST00000513316 CTDSPL2Q05D32 466 aa10.98□□□□□ -0.65
RAB3C-204ENST00000513316 FLIIQ13045 1269 aa10.98□□□□□ -0.65
RAB3C-204ENST00000513316 CCDC180Q9P1Z9 1646 aa10.98□□□□□ -0.65
RAB3C-204ENST00000513316 USP17L8P0C7I0 530 aa10.97□□□□□ -0.65
RAB3C-204ENST00000513316 PPP1R18Q6NYC8 613 aa10.97□□□□□ -0.65
RAB3C-204ENST00000513316 CCNYL3P0C7X3 344 aa10.96□□□□□ -0.65
RAB3C-204ENST00000513316 ANKLE1Q8NAG6 615 aa10.96□□□□□ -0.65
RAB3C-204ENST00000513316 NUDT12Q9BQG2 462 aa10.96□□□□□ -0.65
RAB3C-204ENST00000513316 A0A0G2JS52 829 aa10.95□□□□□ -0.66
RAB3C-204ENST00000513316 RNF223E7ERA6 249 aa10.95□□□□□ -0.66
RAB3C-204ENST00000513316 APBB1O00213 710 aa10.95□□□□□ -0.66
RAB3C-204ENST00000513316 PER1O15534 1290 aaPredicted RBP10.94□□□□□ -0.66
RAB3C-204ENST00000513316 EVA1BQ9NVM1 165 aa10.94□□□□□ -0.66
RAB3C-204ENST00000513316 FCF1Q9Y324 198 aaKnown RBP10.94□□□□□ -0.66
RAB3C-204ENST00000513316 F12P00748 615 aaPredicted RBP10.91□□□□□ -0.66
RAB3C-204ENST00000513316 MCM6Q14566 821 aa10.91□□□□□ -0.66
RAB3C-204ENST00000513316 LRRN4Q8WUT4 740 aa10.91□□□□□ -0.66
RAB3C-204ENST00000513316 PPEF1O14829 653 aaPredicted RBP10.9□□□□□ -0.66
RAB3C-204ENST00000513316 KCNH2Q12809 1159 aa10.9□□□□□ -0.66
RAB3C-204ENST00000513316 CCDC24Q8N4L8 307 aa10.9□□□□□ -0.66
RAB3C-204ENST00000513316 SNRKQ9NRH2 765 aa10.9□□□□□ -0.66
RAB3C-204ENST00000513316 MTMR14Q8NCE2 650 aa10.89□□□□□ -0.67
RAB3C-204ENST00000513316 CTHP32929 405 aa10.88□□□□□ -0.67
RAB3C-204ENST00000513316 PRM3Q9NNZ6 103 aa10.87□□□□□ -0.67
RAB3C-204ENST00000513316 HMX1Q9NP08 348 aaPredicted RBP10.87□□□□□ -0.67
RAB3C-204ENST00000513316 ZBTB24O43167 697 aaPredicted RBP10.86□□□□□ -0.67
RAB3C-204ENST00000513316 PNMA1Q8ND90 353 aa10.86□□□□□ -0.67
RAB3C-204ENST00000513316 MAP10Q9P2G4 905 aa10.86□□□□□ -0.67
RAB3C-204ENST00000513316 RPIAP49247 311 aa10.85□□□□□ -0.67
RAB3C-204ENST00000513316 ARMC2Q8NEN0 867 aa10.85□□□□□ -0.67
RAB3C-204ENST00000513316 GJD4Q96KN9 370 aaPredicted RBP10.85□□□□□ -0.67
RAB3C-204ENST00000513316 TRIM34Q9BYJ4 488 aa10.85□□□□□ -0.67
RAB3C-204ENST00000513316 UNC93B1Q9H1C4 597 aa10.85□□□□□ -0.67
RAB3C-204ENST00000513316 NR6A1Q15406 480 aa10.84□□□□□ -0.67
RAB3C-204ENST00000513316 PLA2G2CQ5R387 149 aa10.84□□□□□ -0.67
RAB3C-204ENST00000513316 PTCRAQ6ISU1 281 aaPredicted RBP10.83□□□□□ -0.68
RAB3C-204ENST00000513316 ERICH6Q7L0X2 663 aa10.83□□□□□ -0.68
RAB3C-204ENST00000513316 NDUFB9Q9Y6M9 179 aa10.83□□□□□ -0.68
RAB3C-204ENST00000513316 ZC3H4Q9UPT8 1303 aaKnown RBP10.83□□□□□ -0.68
RAB3C-204ENST00000513316 GPKOWQ92917 476 aaPredicted RBP eCLIP10.82□□□□□ -0.68
RAB3C-204ENST00000513316 RGS20O76081 388 aa10.81□□□□□ -0.68
RAB3C-204ENST00000513316 UBTFP17480 764 aaKnown RBP10.81□□□□□ -0.68
RAB3C-204ENST00000513316 FKBPLQ9UIM3 349 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms