RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 ZNF592Q92610 1267 aa15.11■□□□□ 0.01
COL11A1-210ENST00000512756 GNAI3P08754 354 aa15.1■□□□□ 0.01
COL11A1-210ENST00000512756 UBTFL1P0CB47 393 aaPredicted RBP15.1■□□□□ 0.01
COL11A1-210ENST00000512756 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.09■□□□□ 0.01
COL11A1-210ENST00000512756 NINLQ9Y2I6 1382 aa15.09■□□□□ 0.01
COL11A1-210ENST00000512756 MCM2P49736 904 aa15.09■□□□□ 0.01
COL11A1-210ENST00000512756 HOMER1Q86YM7 354 aa15.08■□□□□ 0
COL11A1-210ENST00000512756 PSMA5P28066 241 aa15.08■□□□□ 0
COL11A1-210ENST00000512756 CDCA7LQ96GN5 454 aa15.08■□□□□ 0
COL11A1-210ENST00000512756 CABP2Q9NPB3 220 aa15.08■□□□□ 0
COL11A1-210ENST00000512756 ERICH2A1L162 156 aa15.07■□□□□ 0
COL11A1-210ENST00000512756 SAFBQ15424 915 aaKnown RBP eCLIP15.07■□□□□ 0
COL11A1-210ENST00000512756 NCAPD3P42695 1498 aa15.07■□□□□ 0
COL11A1-210ENST00000512756 ARAP1Q96P48 1450 aa15.07■□□□□ 0
COL11A1-210ENST00000512756 MBD3O95983 291 aa15.07■□□□□ 0
COL11A1-210ENST00000512756 GCC1Q96CN9 775 aa15.07■□□□□ 0
COL11A1-210ENST00000512756 SETQ01105 290 aaPredicted RBP15.07■□□□□ 0
COL11A1-210ENST00000512756 RAPGEF4Q8WZA2 1011 aa15.07■□□□□ 0
COL11A1-210ENST00000512756 NFXL1Q6ZNB6 911 aa15.06■□□□□ 0
COL11A1-210ENST00000512756 OSCARQ8IYS5 282 aa15.06■□□□□ 0
COL11A1-210ENST00000512756 CNTROBQ8N137 903 aa15.06■□□□□ 0
COL11A1-210ENST00000512756 CCDC39Q9UFE4 941 aa15.06■□□□□ 0
COL11A1-210ENST00000512756 LETM1O95202 739 aaPredicted RBP15.06■□□□□ 0
COL11A1-210ENST00000512756 NASPP49321 788 aaPredicted RBP15.06■□□□□ 0
COL11A1-210ENST00000512756 CT47B1P0C2W7 299 aaPredicted RBP15.06■□□□□ 0
COL11A1-210ENST00000512756 TEX35Q5T0J7 233 aa15.06■□□□□ 0
COL11A1-210ENST00000512756 RALYLQ86SE5 291 aaKnown RBP15.06■□□□□ 0
COL11A1-210ENST00000512756 PRDM2Q13029 1718 aa15.05■□□□□ 0
COL11A1-210ENST00000512756 RABEP1Q15276 862 aa15.05■□□□□ 0
COL11A1-210ENST00000512756 FAM13BQ9NYF5 915 aa15.05■□□□□ 0
COL11A1-210ENST00000512756 PDZRN3Q9UPQ7 1066 aa15.05■□□□□ 0
COL11A1-210ENST00000512756 TRAK2O60296 914 aa15.05■□□□□ -0
COL11A1-210ENST00000512756 RIC3Q7Z5B4 369 aa15.05■□□□□ -0
COL11A1-210ENST00000512756 VSIG10Q8N0Z9 540 aa15.05■□□□□ -0
COL11A1-210ENST00000512756 CCDC30Q5VVM6 783 aa15.05■□□□□ -0
COL11A1-210ENST00000512756 CLASRPQ8N2M8 674 aaKnown RBP15.05■□□□□ -0
COL11A1-210ENST00000512756 GAS2L2Q8NHY3 880 aa15.05■□□□□ -0
COL11A1-210ENST00000512756 PCMTD1Q96MG8 357 aaPredicted RBP15.05■□□□□ -0
COL11A1-210ENST00000512756 KIAA1107Q9UPP5 1409 aa15.05■□□□□ -0
COL11A1-210ENST00000512756 NAT10Q9H0A0 1025 aaKnown RBP15.05■□□□□ -0
COL11A1-210ENST00000512756 PDE4CQ08493 712 aa15.04■□□□□ -0
COL11A1-210ENST00000512756 CFAP70Q5T0N1 1121 aa15.04■□□□□ -0
COL11A1-210ENST00000512756 EFCAB5A4FU69 1503 aa15.04■□□□□ -0
COL11A1-210ENST00000512756 TMEM132EQ6IEE7 984 aa15.04■□□□□ -0
COL11A1-210ENST00000512756 VPS37DQ86XT2 251 aa15.04■□□□□ -0
COL11A1-210ENST00000512756 ZNF771Q7L3S4 317 aaPredicted RBP15.04■□□□□ -0
COL11A1-210ENST00000512756 EXOSC9Q06265 439 aaKnown RBP15.03■□□□□ -0
COL11A1-210ENST00000512756 ARGLU1Q9NWB6 273 aaPredicted RBP15.03■□□□□ -0
COL11A1-210ENST00000512756 PNISRQ8TF01 805 aaKnown RBP15.03■□□□□ -0
COL11A1-210ENST00000512756 PDCP20941 246 aa15.03■□□□□ -0
COL11A1-210ENST00000512756 WWC1Q8IX03 1113 aa15.03■□□□□ -0
COL11A1-210ENST00000512756 IFT57Q9NWB7 429 aa15.03■□□□□ -0
COL11A1-210ENST00000512756 HIP1O00291 1037 aa15.02■□□□□ -0
COL11A1-210ENST00000512756 ARHGAP5Q13017 1502 aa15.02■□□□□ -0
COL11A1-210ENST00000512756 CFTRP13569 1480 aa15.02■□□□□ -0
COL11A1-210ENST00000512756 MTERF4Q7Z6M4 381 aaKnown RBP15.02■□□□□ -0
COL11A1-210ENST00000512756 CYB5RLQ6IPT4 315 aa15.02□□□□□ -0.01
COL11A1-210ENST00000512756 EHBP1L1Q8N3D4 1523 aa15.02□□□□□ -0.01
COL11A1-210ENST00000512756 GRIN2BQ13224 1484 aa15.02□□□□□ -0.01
COL11A1-210ENST00000512756 PRKAR2BP31323 418 aa15.01□□□□□ -0.01
COL11A1-210ENST00000512756 WDR63Q8IWG1 891 aa15.01□□□□□ -0.01
COL11A1-210ENST00000512756 SMG6Q86US8 1419 aaKnown RBP15.01□□□□□ -0.01
COL11A1-210ENST00000512756 SYNJ2O15056 1496 aa15.01□□□□□ -0.01
COL11A1-210ENST00000512756 NEUROD6Q96NK8 337 aa15.01□□□□□ -0.01
COL11A1-210ENST00000512756 TWISTNBQ3B726 338 aaPredicted RBP15.01□□□□□ -0.01
COL11A1-210ENST00000512756 AQRO60306 1485 aaKnown RBP eCLIP15.01□□□□□ -0.01
COL11A1-210ENST00000512756 TRIM34Q9BYJ4 488 aa15.01□□□□□ -0.01
COL11A1-210ENST00000512756 SURF6O75683 361 aaKnown RBP15□□□□□ -0.01
COL11A1-210ENST00000512756 MAP7D2Q96T17 732 aa15□□□□□ -0.01
COL11A1-210ENST00000512756 BACH2Q9BYV9 841 aa15□□□□□ -0.01
COL11A1-210ENST00000512756 NEK4P51957 841 aa15□□□□□ -0.01
COL11A1-210ENST00000512756 NLRP6P59044 892 aa15□□□□□ -0.01
COL11A1-210ENST00000512756 MNS1Q8NEH6 495 aa15□□□□□ -0.01
COL11A1-210ENST00000512756 FSD1Q9BTV5 496 aa15□□□□□ -0.01
COL11A1-210ENST00000512756 WASHC4Q2M389 1173 aa14.99□□□□□ -0.01
COL11A1-210ENST00000512756 SDF4Q9BRK5 362 aa14.99□□□□□ -0.01
COL11A1-210ENST00000512756 OLFM4Q6UX06 510 aa14.99□□□□□ -0.01
COL11A1-210ENST00000512756 ERC1Q8IUD2 1116 aa14.99□□□□□ -0.01
COL11A1-210ENST00000512756 ACBD3Q9H3P7 528 aa14.99□□□□□ -0.01
COL11A1-210ENST00000512756 PLEKHH2Q8IVE3 1493 aa14.99□□□□□ -0.01
COL11A1-210ENST00000512756 DHX16O60231 1041 aaKnown RBP14.99□□□□□ -0.01
COL11A1-210ENST00000512756 NBPF1Q3BBV0 1214 aa14.99□□□□□ -0.01
COL11A1-210ENST00000512756 NBPF8Q3BBV2 869 aa14.99□□□□□ -0.01
COL11A1-210ENST00000512756 CWC22Q9HCG8 908 aaKnown RBP14.99□□□□□ -0.01
COL11A1-210ENST00000512756 XBP1P17861 261 aa14.99□□□□□ -0.01
COL11A1-210ENST00000512756 GNAI2P04899 355 aa14.98□□□□□ -0.01
COL11A1-210ENST00000512756 AIMP1Q12904 312 aaKnown RBP14.98□□□□□ -0.01
COL11A1-210ENST00000512756 TCEAL9Q9UHQ7 104 aa14.98□□□□□ -0.01
COL11A1-210ENST00000512756 BRMS1Q9HCU9 246 aa14.98□□□□□ -0.01
COL11A1-210ENST00000512756 AFAP1Q8N556 730 aa14.98□□□□□ -0.01
COL11A1-210ENST00000512756 C9orf84Q5VXU9 1444 aa14.97□□□□□ -0.01
COL11A1-210ENST00000512756 CAVIN1Q6NZI2 390 aaKnown RBP14.97□□□□□ -0.01
COL11A1-210ENST00000512756 NLRP2Q9NX02 1062 aa14.97□□□□□ -0.01
COL11A1-210ENST00000512756 NOB1Q9ULX3 412 aaKnown RBP14.97□□□□□ -0.01
COL11A1-210ENST00000512756 AKNAQ7Z591 1439 aa14.97□□□□□ -0.01
COL11A1-210ENST00000512756 PRXQ9BXM0 1461 aa14.96□□□□□ -0.01
COL11A1-210ENST00000512756 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.96□□□□□ -0.01
COL11A1-210ENST00000512756 TSPY26PQ9H489 355 aa14.96□□□□□ -0.01
COL11A1-210ENST00000512756 CCDC173Q0VFZ6 552 aa14.96□□□□□ -0.01
COL11A1-210ENST00000512756 CCT4P50991 539 aaKnown RBP14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms