RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 ARHGEF28Q8N1W1 1705 aaKnown RBP15.14■□□□□ 0.01
PFDN1-204ENST00000512707 TMF1P82094 1093 aa15.14■□□□□ 0.01
PFDN1-204ENST00000512707 CDCA8Q53HL2 280 aa15.14■□□□□ 0.01
PFDN1-204ENST00000512707 SIRT1Q96EB6 747 aa15.14■□□□□ 0.01
PFDN1-204ENST00000512707 AMOTL2Q9Y2J4 779 aa15.14■□□□□ 0.01
PFDN1-204ENST00000512707 SBNO2Q9Y2G9 1366 aa15.13■□□□□ 0.01
PFDN1-204ENST00000512707 PTCH1Q13635 1447 aa15.13■□□□□ 0.01
PFDN1-204ENST00000512707 MED1Q15648 1581 aaPredicted RBP15.13■□□□□ 0.01
PFDN1-204ENST00000512707 PRAM1Q96QH2 718 aa15.13■□□□□ 0.01
PFDN1-204ENST00000512707 QRICH2Q9H0J4 1663 aa15.12■□□□□ 0.01
PFDN1-204ENST00000512707 KCNA6P17658 529 aa15.11■□□□□ 0.01
PFDN1-204ENST00000512707 XRN1Q8IZH2 1706 aaKnown RBP15.11■□□□□ 0.01
PFDN1-204ENST00000512707 PTPRUQ92729 1446 aa15.1■□□□□ 0.01
PFDN1-204ENST00000512707 NKTRP30414 1462 aaKnown RBP15.09■□□□□ 0.01
PFDN1-204ENST00000512707 CHD2O14647 1828 aaKnown RBP15.09■□□□□ 0.01
PFDN1-204ENST00000512707 SAFB2Q14151 953 aaKnown RBP eCLIP15.09■□□□□ 0.01
PFDN1-204ENST00000512707 TESK2Q96S53 571 aa15.09■□□□□ 0.01
PFDN1-204ENST00000512707 NWD1Q149M9 1564 aa15.09■□□□□ 0.01
PFDN1-204ENST00000512707 EVC2Q86UK5 1308 aa15.09■□□□□ 0.01
PFDN1-204ENST00000512707 ROBO2Q9HCK4 1378 aa15.09■□□□□ 0.01
PFDN1-204ENST00000512707 TOM1O60784 492 aa15.08■□□□□ 0
PFDN1-204ENST00000512707 HSPA1LP34931 641 aa15.08■□□□□ 0
PFDN1-204ENST00000512707 WAPLQ7Z5K2 1190 aa15.07■□□□□ 0
PFDN1-204ENST00000512707 POLR3GLQ9BT43 218 aa15.06■□□□□ 0
PFDN1-204ENST00000512707 MINK1Q8N4C8 1332 aaPredicted RBP15.06■□□□□ 0
PFDN1-204ENST00000512707 CCDC7Q96M83 1385 aa15.06■□□□□ 0
PFDN1-204ENST00000512707 STRCP1A6NGW2 1772 aa15.06■□□□□ 0
PFDN1-204ENST00000512707 KIF7Q2M1P5 1343 aa15.05■□□□□ -0
PFDN1-204ENST00000512707 PLEKHH1Q9ULM0 1364 aa15.04■□□□□ -0
PFDN1-204ENST00000512707 PIP4K2BP78356 416 aa15.04■□□□□ -0
PFDN1-204ENST00000512707 C14orf37Q86TY3 774 aa15.04■□□□□ -0
PFDN1-204ENST00000512707 PROSER2Q86WR7 435 aaPredicted RBP15.04■□□□□ -0
PFDN1-204ENST00000512707 WASHC2AQ641Q2 1341 aa15.03■□□□□ -0
PFDN1-204ENST00000512707 SRPK2P78362 688 aaKnown RBP15.03■□□□□ -0
PFDN1-204ENST00000512707 PUS7Q96PZ0 661 aaKnown RBP15.03■□□□□ -0
PFDN1-204ENST00000512707 RNF216Q9NWF9 866 aaPredicted RBP15.03■□□□□ -0
PFDN1-204ENST00000512707 ADGRB2O60241 1585 aa15.02□□□□□ -0.01
PFDN1-204ENST00000512707 TULP4Q9NRJ4 1543 aa15.01□□□□□ -0.01
PFDN1-204ENST00000512707 NCOA3Q9Y6Q9 1424 aa15□□□□□ -0.01
PFDN1-204ENST00000512707 ATAD2Q6PL18 1390 aa15□□□□□ -0.01
PFDN1-204ENST00000512707 C11orf95C9JLR9 678 aaPredicted RBP15□□□□□ -0.01
PFDN1-204ENST00000512707 WASLO00401 505 aaPredicted RBP15□□□□□ -0.01
PFDN1-204ENST00000512707 ADGRL3Q9HAR2 1447 aa15□□□□□ -0.01
PFDN1-204ENST00000512707 LRRC7Q96NW7 1537 aa14.99□□□□□ -0.01
PFDN1-204ENST00000512707 CDK19Q9BWU1 502 aa14.99□□□□□ -0.01
PFDN1-204ENST00000512707 NINLQ9Y2I6 1382 aa14.98□□□□□ -0.01
PFDN1-204ENST00000512707 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.97□□□□□ -0.01
PFDN1-204ENST00000512707 DDX10Q13206 875 aaKnown RBP14.97□□□□□ -0.01
PFDN1-204ENST00000512707 CABP2Q9NPB3 220 aa14.97□□□□□ -0.01
PFDN1-204ENST00000512707 CDC42BPGQ6DT37 1551 aa14.97□□□□□ -0.01
PFDN1-204ENST00000512707 TMEM94Q12767 1356 aa14.97□□□□□ -0.01
PFDN1-204ENST00000512707 MSH6P52701 1360 aa14.96□□□□□ -0.02
PFDN1-204ENST00000512707 NALCNQ8IZF0 1738 aa14.95□□□□□ -0.02
PFDN1-204ENST00000512707 XIRP1Q702N8 1843 aaKnown RBP14.95□□□□□ -0.02
PFDN1-204ENST00000512707 TMC1Q8TDI8 760 aa14.95□□□□□ -0.02
PFDN1-204ENST00000512707 C19orf44Q9H6X5 657 aa14.95□□□□□ -0.02
PFDN1-204ENST00000512707 DCCP43146 1447 aa14.94□□□□□ -0.02
PFDN1-204ENST00000512707 ATF3P18847 181 aa14.94□□□□□ -0.02
PFDN1-204ENST00000512707 ANKARQ7Z5J8 1434 aa14.93□□□□□ -0.02
PFDN1-204ENST00000512707 DIEXFQ68CQ4 756 aaKnown RBP14.93□□□□□ -0.02
PFDN1-204ENST00000512707 RBM33Q96EV2 1170 aaKnown RBP14.93□□□□□ -0.02
PFDN1-204ENST00000512707 NUDT16Q96DE0 195 aaKnown RBP14.92□□□□□ -0.02
PFDN1-204ENST00000512707 TERF2IPQ9NYB0 399 aa14.92□□□□□ -0.02
PFDN1-204ENST00000512707 CCDC61Q9Y6R9 512 aa14.92□□□□□ -0.02
PFDN1-204ENST00000512707 ZBTB22O15209 634 aa14.91□□□□□ -0.02
PFDN1-204ENST00000512707 HDGFL2Q7Z4V5 671 aaPredicted RBP14.91□□□□□ -0.02
PFDN1-204ENST00000512707 CADPS2Q86UW7 1296 aa14.91□□□□□ -0.02
PFDN1-204ENST00000512707 FMN2Q9NZ56 1722 aa14.91□□□□□ -0.02
PFDN1-204ENST00000512707 ATP7BP35670 1465 aa14.9□□□□□ -0.02
PFDN1-204ENST00000512707 ITSN1Q15811 1721 aa14.9□□□□□ -0.02
PFDN1-204ENST00000512707 PPIP5K1Q6PFW1 1433 aa14.9□□□□□ -0.02
PFDN1-204ENST00000512707 MYOM1P52179 1685 aa14.9□□□□□ -0.02
PFDN1-204ENST00000512707 ANKRD36BQ8N2N9 1353 aa14.88□□□□□ -0.03
PFDN1-204ENST00000512707 NUTM2FA1L443 756 aa14.88□□□□□ -0.03
PFDN1-204ENST00000512707 SLC12A5Q9H2X9 1139 aa14.88□□□□□ -0.03
PFDN1-204ENST00000512707 PANK3Q9H999 370 aa14.88□□□□□ -0.03
PFDN1-204ENST00000512707 CABP1Q9NZU7 370 aa14.88□□□□□ -0.03
PFDN1-204ENST00000512707 KNSTRNQ9Y448 316 aa14.87□□□□□ -0.03
PFDN1-204ENST00000512707 TOPAZ1Q8N9V7 1692 aa14.86□□□□□ -0.03
PFDN1-204ENST00000512707 PRR36Q9H6K5 1346 aa14.86□□□□□ -0.03
PFDN1-204ENST00000512707 PLEKHG3A1L390 1219 aa14.85□□□□□ -0.03
PFDN1-204ENST00000512707 ZNF692Q9BU19 519 aaPredicted RBP14.85□□□□□ -0.03
PFDN1-204ENST00000512707 ANP32CO43423 234 aa14.84□□□□□ -0.03
PFDN1-204ENST00000512707 ESCO1Q5FWF5 840 aa14.84□□□□□ -0.03
PFDN1-204ENST00000512707 NGDNQ8NEJ9 315 aaKnown RBP14.84□□□□□ -0.03
PFDN1-204ENST00000512707 USP32Q8NFA0 1604 aa14.84□□□□□ -0.03
PFDN1-204ENST00000512707 A0A1W2PP64 1363 aa14.84□□□□□ -0.03
PFDN1-204ENST00000512707 C1orf167Q5SNV9 1468 aa14.83□□□□□ -0.03
PFDN1-204ENST00000512707 PHF8Q9UPP1 1060 aa14.83□□□□□ -0.04
PFDN1-204ENST00000512707 KTN1Q86UP2 1357 aaKnown RBP14.83□□□□□ -0.04
PFDN1-204ENST00000512707 MST1RQ04912 1400 aa14.83□□□□□ -0.04
PFDN1-204ENST00000512707 FOXD4L1Q9NU39 408 aa14.82□□□□□ -0.04
PFDN1-204ENST00000512707 CGNL1Q0VF96 1302 aa14.82□□□□□ -0.04
PFDN1-204ENST00000512707 NSD3Q9BZ95 1437 aa14.82□□□□□ -0.04
PFDN1-204ENST00000512707 KIF1AQ12756 1690 aa14.81□□□□□ -0.04
PFDN1-204ENST00000512707 RGS17Q9UGC6 210 aaPredicted RBP14.81□□□□□ -0.04
PFDN1-204ENST00000512707 ACEP12821 1306 aa14.81□□□□□ -0.04
PFDN1-204ENST00000512707 CPSF1Q10570 1443 aaKnown RBP14.81□□□□□ -0.04
PFDN1-204ENST00000512707 EDC4Q6P2E9 1401 aaKnown RBP14.81□□□□□ -0.04
PFDN1-204ENST00000512707 HOXD11P31277 338 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 233.1 ms