RNA–Protein interactions for RNA: ENST00000512701.6

TTC39B-208, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS P3 TSL 2 BASIC

Gene TTC39B, Length 10,483 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-208ENST00000512701 AK7Q96M32 723 aa9.27□□□□□ -0.93
TTC39B-208ENST00000512701 TRIM29Q14134 588 aa9.27□□□□□ -0.93
TTC39B-208ENST00000512701 RAPGEF2Q9Y4G8 1499 aa9.27□□□□□ -0.93
TTC39B-208ENST00000512701 G3V3G9 751 aa9.27□□□□□ -0.93
TTC39B-208ENST00000512701 NOM1Q5C9Z4 860 aaKnown RBP9.27□□□□□ -0.93
TTC39B-208ENST00000512701 DCAF8Q5TAQ9 597 aa9.27□□□□□ -0.93
TTC39B-208ENST00000512701 ZKSCAN1P17029 563 aaPredicted RBP9.27□□□□□ -0.93
TTC39B-208ENST00000512701 NEK4P51957 841 aa9.27□□□□□ -0.93
TTC39B-208ENST00000512701 INTS3Q68E01 1043 aaKnown RBP9.27□□□□□ -0.93
TTC39B-208ENST00000512701 CDC45O75419 566 aa9.27□□□□□ -0.93
TTC39B-208ENST00000512701 ANKRD30AQ9BXX3 1397 aa9.27□□□□□ -0.93
TTC39B-208ENST00000512701 HSP90B2PQ58FF3 399 aa9.26□□□□□ -0.93
TTC39B-208ENST00000512701 RRP12Q5JTH9 1297 aaKnown RBP9.26□□□□□ -0.93
TTC39B-208ENST00000512701 TRIM34Q9BYJ4 488 aa9.26□□□□□ -0.93
TTC39B-208ENST00000512701 WASHC2AQ641Q2 1341 aa9.26□□□□□ -0.93
TTC39B-208ENST00000512701 PHLDB1Q86UU1 1377 aa9.26□□□□□ -0.93
TTC39B-208ENST00000512701 GTF2E1P29083 439 aaPredicted RBP9.26□□□□□ -0.93
TTC39B-208ENST00000512701 CENPHQ9H3R5 247 aa9.26□□□□□ -0.93
TTC39B-208ENST00000512701 CCDC173Q0VFZ6 552 aa9.26□□□□□ -0.93
TTC39B-208ENST00000512701 NEUROD6Q96NK8 337 aa9.26□□□□□ -0.93
TTC39B-208ENST00000512701 NUCB2P80303 420 aa9.25□□□□□ -0.93
TTC39B-208ENST00000512701 IPO7O95373 1038 aaKnown RBP9.25□□□□□ -0.93
TTC39B-208ENST00000512701 CCDC18Q5T9S5 1454 aa9.25□□□□□ -0.93
TTC39B-208ENST00000512701 CAMK4Q16566 473 aa9.25□□□□□ -0.93
TTC39B-208ENST00000512701 SPDYE4A6NLX3 237 aa9.25□□□□□ -0.93
TTC39B-208ENST00000512701 DNAJC2Q99543 621 aaKnown RBP9.25□□□□□ -0.93
TTC39B-208ENST00000512701 KIF3AQ9Y496 699 aa9.25□□□□□ -0.93
TTC39B-208ENST00000512701 CCDC7Q96M83 1385 aa9.25□□□□□ -0.93
TTC39B-208ENST00000512701 SDF4Q9BRK5 362 aa9.25□□□□□ -0.93
TTC39B-208ENST00000512701 SYNE3Q6ZMZ3 975 aa9.25□□□□□ -0.93
TTC39B-208ENST00000512701 SRRTQ9BXP5 876 aaKnown RBP9.24□□□□□ -0.93
TTC39B-208ENST00000512701 DDX54Q8TDD1 881 aaKnown RBP9.24□□□□□ -0.93
TTC39B-208ENST00000512701 TDRD9Q8NDG6 1382 aaKnown RBP9.24□□□□□ -0.93
TTC39B-208ENST00000512701 CHMP4AQ9BY43 222 aa9.24□□□□□ -0.93
TTC39B-208ENST00000512701 GGNBP2Q9H3C7 697 aa9.24□□□□□ -0.93
TTC39B-208ENST00000512701 LMOD3Q0VAK6 560 aa9.24□□□□□ -0.93
TTC39B-208ENST00000512701 SYCE3A1L190 88 aa9.24□□□□□ -0.93
TTC39B-208ENST00000512701 WASHC4Q2M389 1173 aa9.23□□□□□ -0.93
TTC39B-208ENST00000512701 CABP2Q9NPB3 220 aa9.23□□□□□ -0.93
TTC39B-208ENST00000512701 CNTLNQ9NXG0 1405 aa9.23□□□□□ -0.93
TTC39B-208ENST00000512701 BACH2Q9BYV9 841 aa9.23□□□□□ -0.93
TTC39B-208ENST00000512701 FAM177BA6PVY3 158 aa9.23□□□□□ -0.93
TTC39B-208ENST00000512701 COG3Q96JB2 828 aa9.23□□□□□ -0.93
TTC39B-208ENST00000512701 NOB1Q9ULX3 412 aaKnown RBP9.23□□□□□ -0.93
TTC39B-208ENST00000512701 ERCC6Q03468 1493 aa9.23□□□□□ -0.93
TTC39B-208ENST00000512701 CGNQ9P2M7 1197 aaKnown RBP9.23□□□□□ -0.93
TTC39B-208ENST00000512701 RDXP35241 583 aaKnown RBP9.22□□□□□ -0.93
TTC39B-208ENST00000512701 RUFY2Q8WXA3 655 aa9.22□□□□□ -0.93
TTC39B-208ENST00000512701 SYTL4Q96C24 671 aaPredicted RBP9.22□□□□□ -0.93
TTC39B-208ENST00000512701 DIAPH1O60610 1272 aaKnown RBP9.22□□□□□ -0.93
TTC39B-208ENST00000512701 G3BP1Q13283 466 aaKnown RBP eCLIP9.22□□□□□ -0.93
TTC39B-208ENST00000512701 ZFYVE27Q5T4F4 411 aa9.22□□□□□ -0.93
TTC39B-208ENST00000512701 LARP6Q9BRS8 491 aaKnown RBP9.22□□□□□ -0.93
TTC39B-208ENST00000512701 FSD1Q9BTV5 496 aa9.22□□□□□ -0.93
TTC39B-208ENST00000512701 TSPYL4Q9UJ04 414 aa9.22□□□□□ -0.93
TTC39B-208ENST00000512701 OLFM4Q6UX06 510 aa9.22□□□□□ -0.93
TTC39B-208ENST00000512701 ESPNB1AK53 854 aa9.21□□□□□ -0.93
TTC39B-208ENST00000512701 LEKR1Q6ZMV7 388 aa9.21□□□□□ -0.93
TTC39B-208ENST00000512701 CWC15Q9P013 229 aaKnown RBP9.21□□□□□ -0.93
TTC39B-208ENST00000512701 HSP90AB2PQ58FF8 381 aa9.21□□□□□ -0.93
TTC39B-208ENST00000512701 ANKRD20A12PQ8NF67 263 aa9.21□□□□□ -0.93
TTC39B-208ENST00000512701 CCDC66A2RUB6 948 aa9.21□□□□□ -0.94
TTC39B-208ENST00000512701 TNNT1P13805 278 aa9.21□□□□□ -0.94
TTC39B-208ENST00000512701 EXOSC9Q06265 439 aaKnown RBP9.21□□□□□ -0.94
TTC39B-208ENST00000512701 CCDC144AA2RUR9 1427 aa9.21□□□□□ -0.94
TTC39B-208ENST00000512701 C20orf194Q5TEA3 1177 aa9.21□□□□□ -0.94
TTC39B-208ENST00000512701 C1orf141Q5JVX7 400 aa9.21□□□□□ -0.94
TTC39B-208ENST00000512701 SPINK5Q9NQ38 1064 aaPredicted RBP9.21□□□□□ -0.94
TTC39B-208ENST00000512701 POLR3GO15318 223 aaPredicted RBP9.2□□□□□ -0.94
TTC39B-208ENST00000512701 CCDC112Q8NEF3 446 aa9.2□□□□□ -0.94
TTC39B-208ENST00000512701 RUNDC1Q96C34 613 aa9.2□□□□□ -0.94
TTC39B-208ENST00000512701 ZNF644Q9H582 1327 aaPredicted RBP9.2□□□□□ -0.94
TTC39B-208ENST00000512701 PIBF1Q8WXW3 757 aa9.2□□□□□ -0.94
TTC39B-208ENST00000512701 SIL1Q9H173 461 aa9.2□□□□□ -0.94
TTC39B-208ENST00000512701 WASHC2CQ9Y4E1 1318 aa9.2□□□□□ -0.94
TTC39B-208ENST00000512701 TCEAL9Q9UHQ7 104 aa9.2□□□□□ -0.94
TTC39B-208ENST00000512701 CT47A1Q5JQC4 288 aaPredicted RBP9.2□□□□□ -0.94
TTC39B-208ENST00000512701 ZMYND15Q9H091 742 aa9.2□□□□□ -0.94
TTC39B-208ENST00000512701 TMEM132EQ6IEE7 984 aa9.19□□□□□ -0.94
TTC39B-208ENST00000512701 PPFIA3O75145 1194 aa9.19□□□□□ -0.94
TTC39B-208ENST00000512701 FILIP1Q7Z7B0 1213 aa9.19□□□□□ -0.94
TTC39B-208ENST00000512701 GPATCH11Q8N954 259 aa9.19□□□□□ -0.94
TTC39B-208ENST00000512701 TNMDQ9H2S6 317 aa9.19□□□□□ -0.94
TTC39B-208ENST00000512701 TEFQ10587 303 aa9.19□□□□□ -0.94
TTC39B-208ENST00000512701 TAF3Q5VWG9 929 aa9.19□□□□□ -0.94
TTC39B-208ENST00000512701 ACBD3Q9H3P7 528 aa9.19□□□□□ -0.94
TTC39B-208ENST00000512701 SERPINC1P01008 464 aa9.19□□□□□ -0.94
TTC39B-208ENST00000512701 CT47B1P0C2W7 299 aaPredicted RBP9.18□□□□□ -0.94
TTC39B-208ENST00000512701 CCDC102AQ96A19 550 aa9.18□□□□□ -0.94
TTC39B-208ENST00000512701 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.18□□□□□ -0.94
TTC39B-208ENST00000512701 RBM27Q9P2N5 1060 aaKnown RBP9.18□□□□□ -0.94
TTC39B-208ENST00000512701 SMARCA5O60264 1052 aaPredicted RBP9.18□□□□□ -0.94
TTC39B-208ENST00000512701 MROH2BQ7Z745 1585 aa9.18□□□□□ -0.94
TTC39B-208ENST00000512701 PDCL2Q8N4E4 241 aa9.18□□□□□ -0.94
TTC39B-208ENST00000512701 MCM4P33991 863 aa9.18□□□□□ -0.94
TTC39B-208ENST00000512701 ZNF526Q8TF50 670 aaPredicted RBP9.18□□□□□ -0.94
TTC39B-208ENST00000512701 RRP9O43818 475 aaKnown RBP9.18□□□□□ -0.94
TTC39B-208ENST00000512701 KINO60870 393 aaKnown RBP9.18□□□□□ -0.94
TTC39B-208ENST00000512701 API5Q9BZZ5 524 aaKnown RBP9.18□□□□□ -0.94
TTC39B-208ENST00000512701 FERMT3Q86UX7 667 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms