RNA–Protein interactions for RNA: ENST00000512069.6

PDE4D-220, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-220ENST00000512069 DDRGK1Q96HY6 314 aa10.52□□□□□ -0.73
PDE4D-220ENST00000512069 MOXD2PA6NHM9 499 aa10.51□□□□□ -0.73
PDE4D-220ENST00000512069 GJA5P36382 358 aa10.51□□□□□ -0.73
PDE4D-220ENST00000512069 ANKLE1Q8NAG6 615 aa10.51□□□□□ -0.73
PDE4D-220ENST00000512069 EMID1Q96A84 441 aaPredicted RBP10.51□□□□□ -0.73
PDE4D-220ENST00000512069 FAM117AQ9C073 453 aa10.51□□□□□ -0.73
PDE4D-220ENST00000512069 PCDHGC3Q9UN70 934 aa10.51□□□□□ -0.73
PDE4D-220ENST00000512069 FDX1P10109 184 aa10.5□□□□□ -0.73
PDE4D-220ENST00000512069 RSPH6AQ9H0K4 717 aa10.5□□□□□ -0.73
PDE4D-220ENST00000512069 PLA2G2CQ5R387 149 aa10.49□□□□□ -0.73
PDE4D-220ENST00000512069 USB1Q9BQ65 265 aaKnown RBP10.49□□□□□ -0.73
PDE4D-220ENST00000512069 SLC19A1P41440 591 aa10.48□□□□□ -0.73
PDE4D-220ENST00000512069 V9GY48 417 aaPredicted RBP10.48□□□□□ -0.73
PDE4D-220ENST00000512069 PLEKHG3A1L390 1219 aa10.47□□□□□ -0.73
PDE4D-220ENST00000512069 SPTLC1O15269 473 aa10.47□□□□□ -0.73
PDE4D-220ENST00000512069 LIAT1Q6ZQX7 453 aa10.47□□□□□ -0.73
PDE4D-220ENST00000512069 MSS51Q4VC12 460 aa10.46□□□□□ -0.73
PDE4D-220ENST00000512069 MYSM1Q5VVJ2 828 aa10.46□□□□□ -0.73
PDE4D-220ENST00000512069 RSBN1LQ6PCB5 846 aaPredicted RBP10.46□□□□□ -0.73
PDE4D-220ENST00000512069 RIC3Q7Z5B4 369 aa10.46□□□□□ -0.73
PDE4D-220ENST00000512069 IRX2Q9BZI1 471 aaPredicted RBP10.46□□□□□ -0.73
PDE4D-220ENST00000512069 FCF1Q9Y324 198 aaKnown RBP10.46□□□□□ -0.73
PDE4D-220ENST00000512069 C6orf229H3BNL8 230 aa10.45□□□□□ -0.74
PDE4D-220ENST00000512069 TUSC1Q2TAM9 212 aa10.45□□□□□ -0.74
PDE4D-220ENST00000512069 SKIV2LQ15477 1246 aaKnown RBP10.43□□□□□ -0.74
PDE4D-220ENST00000512069 PCDHB15Q9Y5E8 787 aa10.43□□□□□ -0.74
PDE4D-220ENST00000512069 MMP16P51512 607 aa10.42□□□□□ -0.74
PDE4D-220ENST00000512069 SH3D19Q5HYK7 790 aa10.42□□□□□ -0.74
PDE4D-220ENST00000512069 SPRYD7Q5W111 196 aa10.42□□□□□ -0.74
PDE4D-220ENST00000512069 IL27Q8NEV9 243 aa10.42□□□□□ -0.74
PDE4D-220ENST00000512069 SPDYE5A6NIY4 337 aa10.4□□□□□ -0.74
PDE4D-220ENST00000512069 DXOO77932 396 aaKnown RBP10.4□□□□□ -0.74
PDE4D-220ENST00000512069 CSPP1Q1MSJ5 1256 aa10.4□□□□□ -0.74
PDE4D-220ENST00000512069 PRPF38BQ5VTL8 546 aaKnown RBP10.4□□□□□ -0.74
PDE4D-220ENST00000512069 RETREG3Q86VR2 466 aa10.4□□□□□ -0.74
PDE4D-220ENST00000512069 GOPCQ9HD26 462 aa10.4□□□□□ -0.74
PDE4D-220ENST00000512069 LIMD1Q9UGP4 676 aa10.4□□□□□ -0.74
PDE4D-220ENST00000512069 GFRA3O60609 400 aa10.39□□□□□ -0.75
PDE4D-220ENST00000512069 POLR3EQ9NVU0 708 aa10.39□□□□□ -0.75
PDE4D-220ENST00000512069 CLK2P49760 499 aaKnown RBP10.38□□□□□ -0.75
PDE4D-220ENST00000512069 MTMR2Q13614 643 aa10.38□□□□□ -0.75
PDE4D-220ENST00000512069 ZNF598Q86UK7 904 aaKnown RBP10.38□□□□□ -0.75
PDE4D-220ENST00000512069 CCDC24Q8N4L8 307 aa10.38□□□□□ -0.75
PDE4D-220ENST00000512069 LILRB3O75022 631 aa10.36□□□□□ -0.75
PDE4D-220ENST00000512069 JUNDP17535 347 aa10.36□□□□□ -0.75
PDE4D-220ENST00000512069 HRCP23327 699 aa10.36□□□□□ -0.75
PDE4D-220ENST00000512069 ZNF697Q5TEC3 545 aa10.36□□□□□ -0.75
PDE4D-220ENST00000512069 PRR7Q8TB68 274 aa10.36□□□□□ -0.75
PDE4D-220ENST00000512069 CABLES1Q8TDN4 633 aa10.36□□□□□ -0.75
PDE4D-220ENST00000512069 ZBTB3Q9H5J0 574 aa10.36□□□□□ -0.75
PDE4D-220ENST00000512069 PDZRN3Q9UPQ7 1066 aa10.36□□□□□ -0.75
PDE4D-220ENST00000512069 TRIM67Q6ZTA4 783 aa10.35□□□□□ -0.75
PDE4D-220ENST00000512069 ZBTB24O43167 697 aaPredicted RBP10.34□□□□□ -0.75
PDE4D-220ENST00000512069 RPIAP49247 311 aa10.34□□□□□ -0.75
PDE4D-220ENST00000512069 PROCA1Q8NCQ7 364 aaPredicted RBP10.34□□□□□ -0.75
PDE4D-220ENST00000512069 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.34□□□□□ -0.75
PDE4D-220ENST00000512069 CD2BP2O95400 341 aaKnown RBP10.33□□□□□ -0.76
PDE4D-220ENST00000512069 QPCTQ16769 361 aa10.33□□□□□ -0.76
PDE4D-220ENST00000512069 CFAP99D6REC4 459 aa10.32□□□□□ -0.76
PDE4D-220ENST00000512069 FOXC1Q12948 553 aa10.32□□□□□ -0.76
PDE4D-220ENST00000512069 DESI1Q6ICB0 168 aa10.32□□□□□ -0.76
PDE4D-220ENST00000512069 NUTM2BA6NNL0 878 aaPredicted RBP10.31□□□□□ -0.76
PDE4D-220ENST00000512069 NUTM2EB1AL46 878 aaPredicted RBP10.31□□□□□ -0.76
PDE4D-220ENST00000512069 TNFRSF10AO00220 468 aa10.31□□□□□ -0.76
PDE4D-220ENST00000512069 NUTM2DQ5VT03 806 aaPredicted RBP10.31□□□□□ -0.76
PDE4D-220ENST00000512069 PTCRAQ6ISU1 281 aaPredicted RBP10.31□□□□□ -0.76
PDE4D-220ENST00000512069 NUTM2AQ8IVF1 878 aaPredicted RBP10.31□□□□□ -0.76
PDE4D-220ENST00000512069 NUDT12Q9BQG2 462 aa10.31□□□□□ -0.76
PDE4D-220ENST00000512069 PPP2R2DQ66LE6 453 aa10.3□□□□□ -0.76
PDE4D-220ENST00000512069 Q6ZNB5 142 aa10.3□□□□□ -0.76
PDE4D-220ENST00000512069 PCMTD1Q96MG8 357 aaPredicted RBP10.3□□□□□ -0.76
PDE4D-220ENST00000512069 NRG2O14511 850 aaPredicted RBP10.29□□□□□ -0.76
PDE4D-220ENST00000512069 GDF9O60383 454 aa10.29□□□□□ -0.76
PDE4D-220ENST00000512069 LAPTM4AQ15012 233 aa10.29□□□□□ -0.76
PDE4D-220ENST00000512069 RTL5Q5HYW3 569 aaPredicted RBP10.29□□□□□ -0.76
PDE4D-220ENST00000512069 PKD2L1Q9P0L9 805 aa10.29□□□□□ -0.76
PDE4D-220ENST00000512069 TRIM32Q13049 653 aa10.28□□□□□ -0.76
PDE4D-220ENST00000512069 TSC1Q92574 1164 aa10.28□□□□□ -0.76
PDE4D-220ENST00000512069 ATP1B4Q9UN42 357 aaPredicted RBP10.28□□□□□ -0.76
PDE4D-220ENST00000512069 CCNYL3P0C7X3 344 aa10.27□□□□□ -0.77
PDE4D-220ENST00000512069 PTPRNQ16849 979 aa10.26□□□□□ -0.77
PDE4D-220ENST00000512069 LYPD8Q6UX82 237 aa10.26□□□□□ -0.77
PDE4D-220ENST00000512069 FBXO31Q5XUX0 539 aaPredicted RBP10.25□□□□□ -0.77
PDE4D-220ENST00000512069 EVA1BQ9NVM1 165 aa10.25□□□□□ -0.77
PDE4D-220ENST00000512069 PER1O15534 1290 aaPredicted RBP10.24□□□□□ -0.77
PDE4D-220ENST00000512069 PRR20EP86478 221 aa10.24□□□□□ -0.77
PDE4D-220ENST00000512069 PRR20CP86479 221 aa10.24□□□□□ -0.77
PDE4D-220ENST00000512069 PRR20DP86480 221 aa10.24□□□□□ -0.77
PDE4D-220ENST00000512069 PRR20BP86481 221 aa10.24□□□□□ -0.77
PDE4D-220ENST00000512069 PRR20AP86496 221 aa10.24□□□□□ -0.77
PDE4D-220ENST00000512069 SKOR1P84550 965 aa10.23□□□□□ -0.77
PDE4D-220ENST00000512069 LCE2BO14633 110 aa10.22□□□□□ -0.77
PDE4D-220ENST00000512069 KCNH2Q12809 1159 aa10.22□□□□□ -0.77
PDE4D-220ENST00000512069 CTHP32929 405 aa10.21□□□□□ -0.77
PDE4D-220ENST00000512069 HELBQ8NG08 1087 aaPredicted RBP10.21□□□□□ -0.77
PDE4D-220ENST00000512069 UNC93B1Q9H1C4 597 aa10.21□□□□□ -0.77
PDE4D-220ENST00000512069 RFC5P40937 340 aa10.2□□□□□ -0.78
PDE4D-220ENST00000512069 MAP10Q9P2G4 905 aa10.2□□□□□ -0.78
PDE4D-220ENST00000512069 WNT7AO00755 349 aa10.19□□□□□ -0.78
PDE4D-220ENST00000512069 CTDSPL2Q05D32 466 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms