RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 ROBO2Q9HCK4 1378 aa28.12■■■□□ 2.09
SMAD1-211ENST00000512019 PTCH1Q13635 1447 aa28.12■■■□□ 2.09
SMAD1-211ENST00000512019 C1orf167Q5SNV9 1468 aa28.1■■■□□ 2.09
SMAD1-211ENST00000512019 ZNF772Q68DY9 489 aaPredicted RBP28.1■■■□□ 2.09
SMAD1-211ENST00000512019 NRXN1Q9ULB1 1477 aa28.08■■■□□ 2.09
SMAD1-211ENST00000512019 KDM2AQ9Y2K7 1162 aa28.08■■■□□ 2.09
SMAD1-211ENST00000512019 LAMC1P11047 1609 aa28.07■■■□□ 2.08
SMAD1-211ENST00000512019 LRRC59Q96AG4 307 aaKnown RBP28.06■■■□□ 2.08
SMAD1-211ENST00000512019 ADGRF5Q8IZF2 1346 aa28.06■■■□□ 2.08
SMAD1-211ENST00000512019 PNPLA6Q8IY17 1366 aa28.06■■■□□ 2.08
SMAD1-211ENST00000512019 PRAG1Q86YV5 1406 aa28.06■■■□□ 2.08
SMAD1-211ENST00000512019 PIK3C2GO75747 1445 aa28.05■■■□□ 2.08
SMAD1-211ENST00000512019 AFF2P51816 1311 aa28.03■■■□□ 2.08
SMAD1-211ENST00000512019 ORAI2Q96SN7 254 aa28.02■■■□□ 2.08
SMAD1-211ENST00000512019 RXRBP28702 533 aa27.98■■■□□ 2.07
SMAD1-211ENST00000512019 C8orf37Q96NL8 207 aa27.97■■■□□ 2.07
SMAD1-211ENST00000512019 CDC42BPGQ6DT37 1551 aa27.95■■■□□ 2.07
SMAD1-211ENST00000512019 SOS2Q07890 1332 aaPredicted RBP27.94■■■□□ 2.06
SMAD1-211ENST00000512019 UPF1Q92900 1129 aaKnown RBP eCLIP27.94■■■□□ 2.06
SMAD1-211ENST00000512019 KIAA1210Q9ULL0 1709 aa27.94■■■□□ 2.06
SMAD1-211ENST00000512019 KNDC1Q76NI1 1749 aa27.93■■■□□ 2.06
SMAD1-211ENST00000512019 CDK12Q9NYV4 1490 aaPredicted RBP27.93■■■□□ 2.06
SMAD1-211ENST00000512019 C14orf93Q9H972 538 aaKnown RBP27.92■■■□□ 2.06
SMAD1-211ENST00000512019 ADAMTS2O95450 1211 aa27.91■■■□□ 2.06
SMAD1-211ENST00000512019 TRPM1Q7Z4N2 1603 aa27.9■■■□□ 2.06
SMAD1-211ENST00000512019 COL22A1Q8NFW1 1626 aaPredicted RBP27.9■■■□□ 2.06
SMAD1-211ENST00000512019 STK26Q9P289 416 aa27.9■■■□□ 2.06
SMAD1-211ENST00000512019 CFAP70Q5T0N1 1121 aa27.89■■■□□ 2.06
SMAD1-211ENST00000512019 TECPR2O15040 1411 aa27.88■■■□□ 2.05
SMAD1-211ENST00000512019 WAPLQ7Z5K2 1190 aa27.88■■■□□ 2.05
SMAD1-211ENST00000512019 QTRT2Q9H974 415 aaKnown RBP27.88■■■□□ 2.05
SMAD1-211ENST00000512019 RGS12O14924 1447 aa27.87■■■□□ 2.05
SMAD1-211ENST00000512019 NBPF8Q3BBV2 869 aa27.87■■■□□ 2.05
SMAD1-211ENST00000512019 TMEM132EQ6IEE7 984 aa27.87■■■□□ 2.05
SMAD1-211ENST00000512019 LRPPRCP42704 1394 aaKnown RBP27.86■■■□□ 2.05
SMAD1-211ENST00000512019 PLEKHH1Q9ULM0 1364 aa27.86■■■□□ 2.05
SMAD1-211ENST00000512019 RALGAPBQ86X10 1494 aa27.86■■■□□ 2.05
SMAD1-211ENST00000512019 FMN2Q9NZ56 1722 aa27.85■■■□□ 2.05
SMAD1-211ENST00000512019 ZEB1P37275 1124 aaPredicted RBP27.85■■■□□ 2.05
SMAD1-211ENST00000512019 ESCO1Q5FWF5 840 aa27.85■■■□□ 2.05
SMAD1-211ENST00000512019 NGLY1Q96IV0 654 aa27.85■■■□□ 2.05
SMAD1-211ENST00000512019 MARF1Q9Y4F3 1742 aaKnown RBP27.84■■■□□ 2.05
SMAD1-211ENST00000512019 PXDNQ92626 1479 aa27.84■■■□□ 2.05
SMAD1-211ENST00000512019 ADGRB1O14514 1584 aa27.83■■■□□ 2.05
SMAD1-211ENST00000512019 NUTM2FA1L443 756 aa27.83■■■□□ 2.05
SMAD1-211ENST00000512019 RBM6P78332 1123 aaKnown RBP27.83■■■□□ 2.05
SMAD1-211ENST00000512019 RGPD8O14715 1765 aaPredicted RBP27.82■■■□□ 2.04
SMAD1-211ENST00000512019 ROCK2O75116 1388 aaKnown RBP27.82■■■□□ 2.04
SMAD1-211ENST00000512019 XPCQ01831 940 aaPredicted RBP27.81■■■□□ 2.04
SMAD1-211ENST00000512019 ABCC11Q96J66 1382 aa27.81■■■□□ 2.04
SMAD1-211ENST00000512019 NPHP3Q7Z494 1330 aa27.8■■■□□ 2.04
SMAD1-211ENST00000512019 YTHDC2Q9H6S0 1430 aaKnown RBP27.8■■■□□ 2.04
SMAD1-211ENST00000512019 FOXO3O43524 673 aa27.78■■■□□ 2.04
SMAD1-211ENST00000512019 GPRASP1Q5JY77 1395 aa27.77■■■□□ 2.04
SMAD1-211ENST00000512019 USP21Q9UK80 565 aa27.77■■■□□ 2.04
SMAD1-211ENST00000512019 NBPF1Q3BBV0 1214 aa27.76■■■□□ 2.03
SMAD1-211ENST00000512019 KIF1AQ12756 1690 aa27.75■■■□□ 2.03
SMAD1-211ENST00000512019 FNBP4Q8N3X1 1017 aaPredicted RBP27.73■■■□□ 2.03
SMAD1-211ENST00000512019 CARD11Q9BXL7 1154 aa27.72■■■□□ 2.03
SMAD1-211ENST00000512019 ATRNO75882 1429 aa27.71■■■□□ 2.03
SMAD1-211ENST00000512019 TRPC5Q9UL62 973 aaPredicted RBP27.7■■■□□ 2.02
SMAD1-211ENST00000512019 DLC1Q96QB1 1528 aa27.7■■■□□ 2.02
SMAD1-211ENST00000512019 BCL9LQ86UU0 1499 aa27.67■■■□□ 2.02
SMAD1-211ENST00000512019 EIF3AQ14152 1382 aaKnown RBP27.66■■■□□ 2.02
SMAD1-211ENST00000512019 SIRT1Q96EB6 747 aa27.66■■■□□ 2.02
SMAD1-211ENST00000512019 TRAK1Q9UPV9 953 aa27.65■■■□□ 2.02
SMAD1-211ENST00000512019 ARHGEF28Q8N1W1 1705 aaKnown RBP27.64■■■□□ 2.02
SMAD1-211ENST00000512019 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.64■■■□□ 2.02
SMAD1-211ENST00000512019 SPATA31A3Q5VYP0 1347 aa27.64■■■□□ 2.01
SMAD1-211ENST00000512019 SAFB2Q14151 953 aaKnown RBP eCLIP27.63■■■□□ 2.01
SMAD1-211ENST00000512019 USP32Q8NFA0 1604 aa27.63■■■□□ 2.01
SMAD1-211ENST00000512019 KRT28Q7Z3Y7 464 aa27.62■■■□□ 2.01
SMAD1-211ENST00000512019 PRAM1Q96QH2 718 aa27.61■■■□□ 2.01
SMAD1-211ENST00000512019 ABCA3Q99758 1704 aa27.6■■■□□ 2.01
SMAD1-211ENST00000512019 ATAD2Q6PL18 1390 aa27.6■■■□□ 2.01
SMAD1-211ENST00000512019 PHF8Q9UPP1 1060 aa27.59■■■□□ 2.01
SMAD1-211ENST00000512019 USP47Q96K76 1375 aa27.59■■■□□ 2.01
SMAD1-211ENST00000512019 POGKQ9P215 609 aa27.58■■■□□ 2.01
SMAD1-211ENST00000512019 GLI3P10071 1580 aa27.57■■■□□ 2
SMAD1-211ENST00000512019 SLIT2O94813 1529 aa27.57■■■□□ 2
SMAD1-211ENST00000512019 ADGRB2O60241 1585 aa27.56■■■□□ 2
SMAD1-211ENST00000512019 TNS3Q68CZ2 1445 aa27.56■■■□□ 2
SMAD1-211ENST00000512019 CENPJQ9HC77 1338 aaPredicted RBP27.55■■■□□ 2
SMAD1-211ENST00000512019 PLCH1Q4KWH8 1693 aa27.55■■■□□ 2
SMAD1-211ENST00000512019 PLEKHG5O94827 1062 aa27.54■■■□□ 2
SMAD1-211ENST00000512019 GJD4Q96KN9 370 aaPredicted RBP27.54■■■□□ 2
SMAD1-211ENST00000512019 BRWD3Q6RI45 1802 aa27.53■■■□□ 2
SMAD1-211ENST00000512019 QRICH2Q9H0J4 1663 aa27.52■■■□□ 2
SMAD1-211ENST00000512019 CABLES1Q8TDN4 633 aa27.52■■■□□ 2
SMAD1-211ENST00000512019 TRPM3Q9HCF6 1732 aaPredicted RBP27.51■■□□□ 1.99
SMAD1-211ENST00000512019 EIF4G2P78344 907 aaKnown RBP eCLIP27.51■■□□□ 1.99
SMAD1-211ENST00000512019 UNC5CLQ8IV45 518 aa27.5■■□□□ 1.99
SMAD1-211ENST00000512019 PMFBP1Q8TBY8 1022 aa27.5■■□□□ 1.99
SMAD1-211ENST00000512019 SBNO1A3KN83 1393 aa27.49■■□□□ 1.99
SMAD1-211ENST00000512019 PSME1Q06323 249 aa27.49■■□□□ 1.99
SMAD1-211ENST00000512019 HIRIP3Q9BW71 556 aaPredicted RBP27.49■■□□□ 1.99
SMAD1-211ENST00000512019 NWD2Q9ULI1 1742 aa27.49■■□□□ 1.99
SMAD1-211ENST00000512019 ANKARQ7Z5J8 1434 aa27.49■■□□□ 1.99
SMAD1-211ENST00000512019 EP400Q96L91 3159 aa27.48■■□□□ 1.99
SMAD1-211ENST00000512019 LMOD2Q6P5Q4 547 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms