RNA–Protein interactions for RNA: ENST00000511423.5

CDH18-211, Transcript of cadherin 18, humanhuman

TSL 4

Gene CDH18, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH18-211ENST00000511423 SPIRE2Q8WWL2 714 aa7.08□□□□□ -1.28
CDH18-211ENST00000511423 PCDHGC3Q9UN70 934 aa7.08□□□□□ -1.28
CDH18-211ENST00000511423 TTLL12Q14166 644 aaPredicted RBP7.07□□□□□ -1.28
CDH18-211ENST00000511423 TRIM67Q6ZTA4 783 aa7.07□□□□□ -1.28
CDH18-211ENST00000511423 MMP16P51512 607 aa7.06□□□□□ -1.28
CDH18-211ENST00000511423 GRIPAP1Q4V328 841 aa7.06□□□□□ -1.28
CDH18-211ENST00000511423 MOXD2PA6NHM9 499 aa7.05□□□□□ -1.28
CDH18-211ENST00000511423 LCE2BO14633 110 aa7.05□□□□□ -1.28
CDH18-211ENST00000511423 IRX2Q9BZI1 471 aaPredicted RBP7.05□□□□□ -1.28
CDH18-211ENST00000511423 DXOO77932 396 aaKnown RBP7.04□□□□□ -1.28
CDH18-211ENST00000511423 Q3C1V9 767 aa7.04□□□□□ -1.28
CDH18-211ENST00000511423 SPRYD7Q5W111 196 aa7.04□□□□□ -1.28
CDH18-211ENST00000511423 BEGAINQ9BUH8 593 aa7.04□□□□□ -1.28
CDH18-211ENST00000511423 NDUFV2P19404 249 aa7.03□□□□□ -1.28
CDH18-211ENST00000511423 SLC19A1P41440 591 aa7.03□□□□□ -1.28
CDH18-211ENST00000511423 SYMPKQ92797 1274 aaKnown RBP7.03□□□□□ -1.28
CDH18-211ENST00000511423 USB1Q9BQ65 265 aaKnown RBP7.03□□□□□ -1.28
CDH18-211ENST00000511423 FDX1P10109 184 aa7.02□□□□□ -1.29
CDH18-211ENST00000511423 GJA5P36382 358 aa7.02□□□□□ -1.29
CDH18-211ENST00000511423 TBC1D2Q9BYX2 928 aa7.02□□□□□ -1.29
CDH18-211ENST00000511423 FCF1Q9Y324 198 aaKnown RBP7.02□□□□□ -1.29
CDH18-211ENST00000511423 SHROOM4Q9ULL8 1493 aa7.01□□□□□ -1.29
CDH18-211ENST00000511423 ZNF598Q86UK7 904 aaKnown RBP7.01□□□□□ -1.29
CDH18-211ENST00000511423 NUTM1Q86Y26 1132 aa7.01□□□□□ -1.29
CDH18-211ENST00000511423 SPTLC1O15269 473 aa7□□□□□ -1.29
CDH18-211ENST00000511423 GDF9O60383 454 aa7□□□□□ -1.29
CDH18-211ENST00000511423 RSBN1LQ6PCB5 846 aaPredicted RBP7□□□□□ -1.29
CDH18-211ENST00000511423 RETREG3Q86VR2 466 aa6.99□□□□□ -1.29
CDH18-211ENST00000511423 EIF4G1Q04637 1599 aaKnown RBP6.99□□□□□ -1.29
CDH18-211ENST00000511423 NRG2O14511 850 aaPredicted RBP6.98□□□□□ -1.29
CDH18-211ENST00000511423 JUNDP17535 347 aa6.98□□□□□ -1.29
CDH18-211ENST00000511423 RPIAP49247 311 aa6.98□□□□□ -1.29
CDH18-211ENST00000511423 PRR20EP86478 221 aa6.98□□□□□ -1.29
CDH18-211ENST00000511423 PRR20CP86479 221 aa6.98□□□□□ -1.29
CDH18-211ENST00000511423 PRR20DP86480 221 aa6.98□□□□□ -1.29
CDH18-211ENST00000511423 PRR20BP86481 221 aa6.98□□□□□ -1.29
CDH18-211ENST00000511423 PRR20AP86496 221 aa6.98□□□□□ -1.29
CDH18-211ENST00000511423 MYSM1Q5VVJ2 828 aa6.98□□□□□ -1.29
CDH18-211ENST00000511423 PKD2L1Q9P0L9 805 aa6.98□□□□□ -1.29
CDH18-211ENST00000511423 PCDHB15Q9Y5E8 787 aa6.98□□□□□ -1.29
CDH18-211ENST00000511423 TUSC1Q2TAM9 212 aa6.97□□□□□ -1.29
CDH18-211ENST00000511423 ZNF697Q5TEC3 545 aa6.97□□□□□ -1.29
CDH18-211ENST00000511423 LIMD1Q9UGP4 676 aa6.97□□□□□ -1.29
CDH18-211ENST00000511423 GFRA3O60609 400 aa6.96□□□□□ -1.3
CDH18-211ENST00000511423 LAPTM4AQ15012 233 aa6.96□□□□□ -1.3
CDH18-211ENST00000511423 GPBP1L1Q9HC44 474 aaPredicted RBP6.96□□□□□ -1.3
CDH18-211ENST00000511423 DIXDC1Q155Q3 683 aa6.95□□□□□ -1.3
CDH18-211ENST00000511423 PDZRN3Q9UPQ7 1066 aa6.95□□□□□ -1.3
CDH18-211ENST00000511423 PLEKHG3A1L390 1219 aa6.94□□□□□ -1.3
CDH18-211ENST00000511423 DESI1Q6ICB0 168 aa6.94□□□□□ -1.3
CDH18-211ENST00000511423 PTCRAQ6ISU1 281 aaPredicted RBP6.94□□□□□ -1.3
CDH18-211ENST00000511423 RIC3Q7Z5B4 369 aa6.94□□□□□ -1.3
CDH18-211ENST00000511423 KDM4CQ9H3R0 1056 aa6.94□□□□□ -1.3
CDH18-211ENST00000511423 CFAP99D6REC4 459 aa6.93□□□□□ -1.3
CDH18-211ENST00000511423 C6orf229H3BNL8 230 aa6.93□□□□□ -1.3
CDH18-211ENST00000511423 HRCP23327 699 aa6.93□□□□□ -1.3
CDH18-211ENST00000511423 MTMR2Q13614 643 aa6.93□□□□□ -1.3
CDH18-211ENST00000511423 PRPF38BQ5VTL8 546 aaKnown RBP6.93□□□□□ -1.3
CDH18-211ENST00000511423 FBXO31Q5XUX0 539 aaPredicted RBP6.93□□□□□ -1.3
CDH18-211ENST00000511423 PRR7Q8TB68 274 aa6.93□□□□□ -1.3
CDH18-211ENST00000511423 LILRB3O75022 631 aa6.92□□□□□ -1.3
CDH18-211ENST00000511423 TRIM32Q13049 653 aa6.92□□□□□ -1.3
CDH18-211ENST00000511423 QPCTQ16769 361 aa6.92□□□□□ -1.3
CDH18-211ENST00000511423 CABLES1Q8TDN4 633 aa6.92□□□□□ -1.3
CDH18-211ENST00000511423 FAM117AQ9C073 453 aa6.92□□□□□ -1.3
CDH18-211ENST00000511423 TOR4AQ9NXH8 423 aa6.92□□□□□ -1.3
CDH18-211ENST00000511423 SPDYE5A6NIY4 337 aa6.91□□□□□ -1.3
CDH18-211ENST00000511423 SKOR1P84550 965 aa6.91□□□□□ -1.3
CDH18-211ENST00000511423 PTPRNQ16849 979 aa6.91□□□□□ -1.3
CDH18-211ENST00000511423 NUDT12Q9BQG2 462 aa6.91□□□□□ -1.3
CDH18-211ENST00000511423 Q6ZNB5 142 aa6.9□□□□□ -1.3
CDH18-211ENST00000511423 ZBTB3Q9H5J0 574 aa6.9□□□□□ -1.3
CDH18-211ENST00000511423 TNFRSF10AO00220 468 aa6.89□□□□□ -1.31
CDH18-211ENST00000511423 CD2BP2O95400 341 aaKnown RBP6.89□□□□□ -1.31
CDH18-211ENST00000511423 CCNYL3P0C7X3 344 aa6.89□□□□□ -1.31
CDH18-211ENST00000511423 LYPD8Q6UX82 237 aa6.89□□□□□ -1.31
CDH18-211ENST00000511423 EVA1BQ9NVM1 165 aa6.89□□□□□ -1.31
CDH18-211ENST00000511423 WNT7AO00755 349 aa6.88□□□□□ -1.31
CDH18-211ENST00000511423 F12P00748 615 aaPredicted RBP6.88□□□□□ -1.31
CDH18-211ENST00000511423 CLK2P49760 499 aaKnown RBP6.88□□□□□ -1.31
CDH18-211ENST00000511423 SH3D19Q5HYK7 790 aa6.88□□□□□ -1.31
CDH18-211ENST00000511423 RTL5Q5HYW3 569 aaPredicted RBP6.88□□□□□ -1.31
CDH18-211ENST00000511423 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.88□□□□□ -1.31
CDH18-211ENST00000511423 ERCC6Q03468 1493 aa6.87□□□□□ -1.31
CDH18-211ENST00000511423 PER1O15534 1290 aaPredicted RBP6.87□□□□□ -1.31
CDH18-211ENST00000511423 TRAF7Q6Q0C0 670 aa6.87□□□□□ -1.31
CDH18-211ENST00000511423 DGAT1O75907 488 aa6.86□□□□□ -1.31
CDH18-211ENST00000511423 BRPF1P55201 1214 aaPredicted RBP6.86□□□□□ -1.31
CDH18-211ENST00000511423 WNT7BP56706 349 aa6.86□□□□□ -1.31
CDH18-211ENST00000511423 MYT1Q01538 1121 aa6.86□□□□□ -1.31
CDH18-211ENST00000511423 KCNH2Q12809 1159 aa6.86□□□□□ -1.31
CDH18-211ENST00000511423 FOXC1Q12948 553 aa6.86□□□□□ -1.31
CDH18-211ENST00000511423 SKIV2LQ15477 1246 aaKnown RBP6.86□□□□□ -1.31
CDH18-211ENST00000511423 CSPP1Q1MSJ5 1256 aa6.86□□□□□ -1.31
CDH18-211ENST00000511423 CCDC24Q8N4L8 307 aa6.86□□□□□ -1.31
CDH18-211ENST00000511423 DDRGK1Q96HY6 314 aa6.86□□□□□ -1.31
CDH18-211ENST00000511423 RSPH6AQ9H0K4 717 aa6.86□□□□□ -1.31
CDH18-211ENST00000511423 POLR3EQ9NVU0 708 aa6.86□□□□□ -1.31
CDH18-211ENST00000511423 ZBTB24O43167 697 aaPredicted RBP6.85□□□□□ -1.31
CDH18-211ENST00000511423 AVPP01185 164 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms