RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 MORN1Q5T089 497 aa7□□□□□ -1.29
TRAPPC11-207ENST00000511409 ZNF598Q86UK7 904 aaKnown RBP7□□□□□ -1.29
TRAPPC11-207ENST00000511409 FUT2Q10981 343 aa6.99□□□□□ -1.29
TRAPPC11-207ENST00000511409 GRIPAP1Q4V328 841 aa6.99□□□□□ -1.29
TRAPPC11-207ENST00000511409 PKDCCQ504Y2 493 aa6.99□□□□□ -1.29
TRAPPC11-207ENST00000511409 SPRYD7Q5W111 196 aa6.99□□□□□ -1.29
TRAPPC11-207ENST00000511409 PCMTD1Q96MG8 357 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC11-207ENST00000511409 RSPH6AQ9H0K4 717 aa6.99□□□□□ -1.29
TRAPPC11-207ENST00000511409 SCUBE3Q8IX30 993 aa6.98□□□□□ -1.29
TRAPPC11-207ENST00000511409 KDM4AO75164 1064 aa6.97□□□□□ -1.29
TRAPPC11-207ENST00000511409 C14orf37Q86TY3 774 aa6.97□□□□□ -1.29
TRAPPC11-207ENST00000511409 TIMELESSQ9UNS1 1208 aa6.97□□□□□ -1.29
TRAPPC11-207ENST00000511409 ADH1BP00325 375 aa6.96□□□□□ -1.3
TRAPPC11-207ENST00000511409 SH3D19Q5HYK7 790 aa6.96□□□□□ -1.3
TRAPPC11-207ENST00000511409 NUTM1Q86Y26 1132 aa6.96□□□□□ -1.3
TRAPPC11-207ENST00000511409 THAP11Q96EK4 314 aa6.96□□□□□ -1.3
TRAPPC11-207ENST00000511409 GOPCQ9HD26 462 aa6.96□□□□□ -1.3
TRAPPC11-207ENST00000511409 POLR3EQ9NVU0 708 aa6.96□□□□□ -1.3
TRAPPC11-207ENST00000511409 TLL1O43897 1013 aa6.95□□□□□ -1.3
TRAPPC11-207ENST00000511409 GDF9O60383 454 aa6.95□□□□□ -1.3
TRAPPC11-207ENST00000511409 DIXDC1Q155Q3 683 aa6.95□□□□□ -1.3
TRAPPC11-207ENST00000511409 PUS10Q3MIT2 529 aaKnown RBP6.95□□□□□ -1.3
TRAPPC11-207ENST00000511409 ERICH6Q7L0X2 663 aa6.95□□□□□ -1.3
TRAPPC11-207ENST00000511409 TBC1D2Q9BYX2 928 aa6.95□□□□□ -1.3
TRAPPC11-207ENST00000511409 SKIV2LQ15477 1246 aaKnown RBP6.94□□□□□ -1.3
TRAPPC11-207ENST00000511409 LCE2AQ5TA79 106 aaPredicted RBP6.94□□□□□ -1.3
TRAPPC11-207ENST00000511409 ZNF697Q5TEC3 545 aa6.94□□□□□ -1.3
TRAPPC11-207ENST00000511409 BRICD5Q6PL45 260 aa6.94□□□□□ -1.3
TRAPPC11-207ENST00000511409 SLC27A5Q9Y2P5 690 aa6.94□□□□□ -1.3
TRAPPC11-207ENST00000511409 HOXA2O43364 376 aa6.93□□□□□ -1.3
TRAPPC11-207ENST00000511409 GJA5P36382 358 aa6.93□□□□□ -1.3
TRAPPC11-207ENST00000511409 Q3C1V9 767 aa6.93□□□□□ -1.3
TRAPPC11-207ENST00000511409 MYSM1Q5VVJ2 828 aa6.93□□□□□ -1.3
TRAPPC11-207ENST00000511409 LIAT1Q6ZQX7 453 aa6.93□□□□□ -1.3
TRAPPC11-207ENST00000511409 FMNL1O95466 1100 aaPredicted RBP6.92□□□□□ -1.3
TRAPPC11-207ENST00000511409 S1PR4O95977 384 aa6.92□□□□□ -1.3
TRAPPC11-207ENST00000511409 CRIPAKQ8N1N5 446 aa6.92□□□□□ -1.3
TRAPPC11-207ENST00000511409 SPIRE2Q8WWL2 714 aa6.92□□□□□ -1.3
TRAPPC11-207ENST00000511409 SPSB2Q99619 263 aa6.92□□□□□ -1.3
TRAPPC11-207ENST00000511409 FAM187AA6NFU0 413 aa6.91□□□□□ -1.3
TRAPPC11-207ENST00000511409 CLK2P49760 499 aaKnown RBP6.91□□□□□ -1.3
TRAPPC11-207ENST00000511409 MSS51Q4VC12 460 aa6.91□□□□□ -1.3
TRAPPC11-207ENST00000511409 PROCA1Q8NCQ7 364 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC11-207ENST00000511409 POTECB2RU33 542 aa6.9□□□□□ -1.3
TRAPPC11-207ENST00000511409 CSPP1Q1MSJ5 1256 aa6.9□□□□□ -1.3
TRAPPC11-207ENST00000511409 TREML4Q6UXN2 200 aa6.9□□□□□ -1.3
TRAPPC11-207ENST00000511409 RIC3Q7Z5B4 369 aa6.9□□□□□ -1.3
TRAPPC11-207ENST00000511409 SLC6A16Q9GZN6 736 aa6.9□□□□□ -1.3
TRAPPC11-207ENST00000511409 FAM160A2Q8N612 972 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC11-207ENST00000511409 MOXD2PA6NHM9 499 aa6.88□□□□□ -1.31
TRAPPC11-207ENST00000511409 PPEF1O14829 653 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC11-207ENST00000511409 NDUFV2P19404 249 aa6.88□□□□□ -1.31
TRAPPC11-207ENST00000511409 AAASQ9NRG9 546 aa6.88□□□□□ -1.31
TRAPPC11-207ENST00000511409 LIMD1Q9UGP4 676 aa6.88□□□□□ -1.31
TRAPPC11-207ENST00000511409 TNFRSF10AO00220 468 aa6.87□□□□□ -1.31
TRAPPC11-207ENST00000511409 AVPP01185 164 aa6.87□□□□□ -1.31
TRAPPC11-207ENST00000511409 MMP16P51512 607 aa6.87□□□□□ -1.31
TRAPPC11-207ENST00000511409 TUSC1Q2TAM9 212 aa6.87□□□□□ -1.31
TRAPPC11-207ENST00000511409 RNF19BQ6ZMZ0 732 aa6.87□□□□□ -1.31
TRAPPC11-207ENST00000511409 USB1Q9BQ65 265 aaKnown RBP6.87□□□□□ -1.31
TRAPPC11-207ENST00000511409 FDX1P10109 184 aa6.86□□□□□ -1.31
TRAPPC11-207ENST00000511409 PLA2G2CQ5R387 149 aa6.86□□□□□ -1.31
TRAPPC11-207ENST00000511409 RSBN1LQ6PCB5 846 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC11-207ENST00000511409 HLA-CQ95604 372 aa6.86□□□□□ -1.31
TRAPPC11-207ENST00000511409 PKD2L1Q9P0L9 805 aa6.86□□□□□ -1.31
TRAPPC11-207ENST00000511409 NUTM2BA6NNL0 878 aaPredicted RBP6.85□□□□□ -1.31
TRAPPC11-207ENST00000511409 NUTM2EB1AL46 878 aaPredicted RBP6.85□□□□□ -1.31
TRAPPC11-207ENST00000511409 SPTLC1O15269 473 aa6.85□□□□□ -1.31
TRAPPC11-207ENST00000511409 ST8SIA5O15466 376 aa6.85□□□□□ -1.31
TRAPPC11-207ENST00000511409 NUTM2DQ5VT03 806 aaPredicted RBP6.85□□□□□ -1.31
TRAPPC11-207ENST00000511409 RETREG3Q86VR2 466 aa6.85□□□□□ -1.31
TRAPPC11-207ENST00000511409 NUTM2AQ8IVF1 878 aaPredicted RBP6.85□□□□□ -1.31
TRAPPC11-207ENST00000511409 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.85□□□□□ -1.31
TRAPPC11-207ENST00000511409 PCDHGC3Q9UN70 934 aa6.85□□□□□ -1.31
TRAPPC11-207ENST00000511409 SPDYE5A6NIY4 337 aa6.84□□□□□ -1.31
TRAPPC11-207ENST00000511409 DXOO77932 396 aaKnown RBP6.84□□□□□ -1.31
TRAPPC11-207ENST00000511409 RPIAP49247 311 aa6.84□□□□□ -1.31
TRAPPC11-207ENST00000511409 GUCA2AQ02747 115 aa6.84□□□□□ -1.31
TRAPPC11-207ENST00000511409 FLIIQ13045 1269 aa6.84□□□□□ -1.31
TRAPPC11-207ENST00000511409 PCDHB15Q9Y5E8 787 aa6.84□□□□□ -1.31
TRAPPC11-207ENST00000511409 SMCPP49901 116 aaPredicted RBP6.83□□□□□ -1.32
TRAPPC11-207ENST00000511409 CTC1Q2NKJ3 1217 aa6.83□□□□□ -1.32
TRAPPC11-207ENST00000511409 PRPF38BQ5VTL8 546 aaKnown RBP6.83□□□□□ -1.32
TRAPPC11-207ENST00000511409 RFC5P40937 340 aa6.82□□□□□ -1.32
TRAPPC11-207ENST00000511409 QPCTQ16769 361 aa6.82□□□□□ -1.32
TRAPPC11-207ENST00000511409 DESI1Q6ICB0 168 aa6.82□□□□□ -1.32
TRAPPC11-207ENST00000511409 CABLES1Q8TDN4 633 aa6.82□□□□□ -1.32
TRAPPC11-207ENST00000511409 TOR4AQ9NXH8 423 aa6.82□□□□□ -1.32
TRAPPC11-207ENST00000511409 WIPF1O43516 503 aa6.81□□□□□ -1.32
TRAPPC11-207ENST00000511409 ZBTB3Q9H5J0 574 aa6.81□□□□□ -1.32
TRAPPC11-207ENST00000511409 PRDM9Q9NQV7 894 aa6.81□□□□□ -1.32
TRAPPC11-207ENST00000511409 C6orf229H3BNL8 230 aa6.8□□□□□ -1.32
TRAPPC11-207ENST00000511409 JUNDP17535 347 aa6.8□□□□□ -1.32
TRAPPC11-207ENST00000511409 HRCP23327 699 aa6.8□□□□□ -1.32
TRAPPC11-207ENST00000511409 MTMR2Q13614 643 aa6.8□□□□□ -1.32
TRAPPC11-207ENST00000511409 FBXO31Q5XUX0 539 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC11-207ENST00000511409 TSC1Q92574 1164 aa6.8□□□□□ -1.32
TRAPPC11-207ENST00000511409 STK17AQ9UEE5 414 aa6.8□□□□□ -1.32
TRAPPC11-207ENST00000511409 FCF1Q9Y324 198 aaKnown RBP6.8□□□□□ -1.32
TRAPPC11-207ENST00000511409 LILRB3O75022 631 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms