RNA–Protein interactions for RNA: ENST00000511241.5

LINC01088-207, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 679 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-207ENST00000511241 THSD4Q6ZMP0 1018 aa13.77□□□□□ -0.21
LINC01088-207ENST00000511241 PCDH10Q9P2E7 1040 aa13.77□□□□□ -0.21
LINC01088-207ENST00000511241 WIZO95785 1651 aa13.76□□□□□ -0.21
LINC01088-207ENST00000511241 LILRB3O75022 631 aa13.75□□□□□ -0.21
LINC01088-207ENST00000511241 FLIIQ13045 1269 aa13.75□□□□□ -0.21
LINC01088-207ENST00000511241 PCDHB15Q9Y5E8 787 aa13.75□□□□□ -0.21
LINC01088-207ENST00000511241 C14orf37Q86TY3 774 aa13.74□□□□□ -0.21
LINC01088-207ENST00000511241 KCTD12Q96CX2 325 aaKnown RBP13.74□□□□□ -0.21
LINC01088-207ENST00000511241 CSPP1Q1MSJ5 1256 aa13.73□□□□□ -0.21
LINC01088-207ENST00000511241 ZBTB3Q9H5J0 574 aa13.73□□□□□ -0.21
LINC01088-207ENST00000511241 TIMELESSQ9UNS1 1208 aa13.73□□□□□ -0.21
LINC01088-207ENST00000511241 RFC5P40937 340 aa13.72□□□□□ -0.21
LINC01088-207ENST00000511241 APLP1P51693 650 aa13.72□□□□□ -0.21
LINC01088-207ENST00000511241 TMEM259Q4ZIN3 620 aa13.72□□□□□ -0.21
LINC01088-207ENST00000511241 MORN1Q5T089 497 aa13.72□□□□□ -0.21
LINC01088-207ENST00000511241 NYAP1Q6ZVC0 841 aa13.72□□□□□ -0.21
LINC01088-207ENST00000511241 WBP1LQ9NX94 342 aa13.72□□□□□ -0.21
LINC01088-207ENST00000511241 PCDHGC3Q9UN70 934 aa13.72□□□□□ -0.21
LINC01088-207ENST00000511241 LAMC3Q9Y6N6 1575 aa13.71□□□□□ -0.21
LINC01088-207ENST00000511241 THOC2Q8NI27 1593 aaKnown RBP13.71□□□□□ -0.22
LINC01088-207ENST00000511241 SPDYE5A6NIY4 337 aa13.7□□□□□ -0.22
LINC01088-207ENST00000511241 NUTM2BA6NNL0 878 aaPredicted RBP13.7□□□□□ -0.22
LINC01088-207ENST00000511241 NUTM2EB1AL46 878 aaPredicted RBP13.7□□□□□ -0.22
LINC01088-207ENST00000511241 GUCA2AQ02747 115 aa13.7□□□□□ -0.22
LINC01088-207ENST00000511241 QPCTQ16769 361 aa13.7□□□□□ -0.22
LINC01088-207ENST00000511241 NUTM2DQ5VT03 806 aaPredicted RBP13.7□□□□□ -0.22
LINC01088-207ENST00000511241 NUTM2AQ8IVF1 878 aaPredicted RBP13.7□□□□□ -0.22
LINC01088-207ENST00000511241 BANK1Q8NDB2 785 aa13.7□□□□□ -0.22
LINC01088-207ENST00000511241 HLA-CQ95604 372 aa13.7□□□□□ -0.22
LINC01088-207ENST00000511241 HRCP23327 699 aa13.69□□□□□ -0.22
LINC01088-207ENST00000511241 MTMR2Q13614 643 aa13.68□□□□□ -0.22
LINC01088-207ENST00000511241 Q3C1V9 767 aa13.68□□□□□ -0.22
LINC01088-207ENST00000511241 PCDHB3Q9Y5E6 796 aa13.68□□□□□ -0.22
LINC01088-207ENST00000511241 CADPSQ9ULU8 1353 aa13.68□□□□□ -0.22
LINC01088-207ENST00000511241 RSF1Q96T23 1441 aaPredicted RBP13.67□□□□□ -0.22
LINC01088-207ENST00000511241 KIF21AQ7Z4S6 1674 aa13.67□□□□□ -0.22
LINC01088-207ENST00000511241 PUS10Q3MIT2 529 aaKnown RBP13.67□□□□□ -0.22
LINC01088-207ENST00000511241 FBXO31Q5XUX0 539 aaPredicted RBP13.67□□□□□ -0.22
LINC01088-207ENST00000511241 MYT1LQ9UL68 1186 aa13.67□□□□□ -0.22
LINC01088-207ENST00000511241 PDS5BQ9NTI5 1447 aa13.66□□□□□ -0.22
LINC01088-207ENST00000511241 RTL5Q5HYW3 569 aaPredicted RBP13.66□□□□□ -0.22
LINC01088-207ENST00000511241 CABLES1Q8TDN4 633 aa13.66□□□□□ -0.22
LINC01088-207ENST00000511241 SLC27A5Q9Y2P5 690 aa13.66□□□□□ -0.22
LINC01088-207ENST00000511241 C6orf229H3BNL8 230 aa13.65□□□□□ -0.22
LINC01088-207ENST00000511241 NR1I2O75469 434 aa13.65□□□□□ -0.22
LINC01088-207ENST00000511241 SALL2Q9Y467 1007 aaPredicted RBP13.65□□□□□ -0.22
LINC01088-207ENST00000511241 SCUBE3Q8IX30 993 aa13.62□□□□□ -0.23
LINC01088-207ENST00000511241 PTPN5P54829 565 aa13.61□□□□□ -0.23
LINC01088-207ENST00000511241 RETREG3Q86VR2 466 aa13.61□□□□□ -0.23
LINC01088-207ENST00000511241 MCM6Q14566 821 aa13.6□□□□□ -0.23
LINC01088-207ENST00000511241 BLOC1S3Q6QNY0 202 aa13.59□□□□□ -0.23
LINC01088-207ENST00000511241 SOCS7O14512 581 aa13.58□□□□□ -0.24
LINC01088-207ENST00000511241 AP1G2O75843 785 aa13.58□□□□□ -0.24
LINC01088-207ENST00000511241 FMNL1O95466 1100 aaPredicted RBP13.58□□□□□ -0.24
LINC01088-207ENST00000511241 BRICD5Q6PL45 260 aa13.58□□□□□ -0.24
LINC01088-207ENST00000511241 HELBQ8NG08 1087 aaPredicted RBP13.58□□□□□ -0.24
LINC01088-207ENST00000511241 SYMPKQ92797 1274 aaKnown RBP13.58□□□□□ -0.24
LINC01088-207ENST00000511241 MRC2Q9UBG0 1479 aa13.56□□□□□ -0.24
LINC01088-207ENST00000511241 PRR7Q8TB68 274 aa13.56□□□□□ -0.24
LINC01088-207ENST00000511241 USB1Q9BQ65 265 aaKnown RBP13.56□□□□□ -0.24
LINC01088-207ENST00000511241 ZMYND15Q9H091 742 aa13.56□□□□□ -0.24
LINC01088-207ENST00000511241 TOP2AP11388 1531 aaKnown RBP13.55□□□□□ -0.24
LINC01088-207ENST00000511241 DESI1Q6ICB0 168 aa13.55□□□□□ -0.24
LINC01088-207ENST00000511241 SPNS2Q8IVW8 549 aa13.55□□□□□ -0.24
LINC01088-207ENST00000511241 THAP11Q96EK4 314 aa13.55□□□□□ -0.24
LINC01088-207ENST00000511241 CFAP99D6REC4 459 aa13.54□□□□□ -0.24
LINC01088-207ENST00000511241 APBB1O00213 710 aa13.54□□□□□ -0.24
LINC01088-207ENST00000511241 RNF19BQ6ZMZ0 732 aa13.54□□□□□ -0.24
LINC01088-207ENST00000511241 USP17L8P0C7I0 530 aa13.53□□□□□ -0.24
LINC01088-207ENST00000511241 UBTFP17480 764 aaKnown RBP13.53□□□□□ -0.24
LINC01088-207ENST00000511241 COPS2P61201 443 aa13.53□□□□□ -0.24
LINC01088-207ENST00000511241 SNRKQ9NRH2 765 aa13.53□□□□□ -0.24
LINC01088-207ENST00000511241 FANCD2Q9BXW9 1451 aa13.53□□□□□ -0.24
LINC01088-207ENST00000511241 RNF166Q96A37 237 aaPredicted RBP13.52□□□□□ -0.25
LINC01088-207ENST00000511241 HCSTQ9UBK5 93 aa13.52□□□□□ -0.25
LINC01088-207ENST00000511241 CFTRP13569 1480 aa13.52□□□□□ -0.25
LINC01088-207ENST00000511241 WDR62O43379 1518 aa13.52□□□□□ -0.25
LINC01088-207ENST00000511241 CEP164Q9UPV0 1460 aa13.51□□□□□ -0.25
LINC01088-207ENST00000511241 CTDSPL2Q05D32 466 aa13.51□□□□□ -0.25
LINC01088-207ENST00000511241 TSC1Q92574 1164 aa13.51□□□□□ -0.25
LINC01088-207ENST00000511241 MTRQ99707 1265 aa13.51□□□□□ -0.25
LINC01088-207ENST00000511241 IL21Q9HBE4 155 aa13.51□□□□□ -0.25
LINC01088-207ENST00000511241 ZPR1O75312 459 aa13.5□□□□□ -0.25
LINC01088-207ENST00000511241 SPSB2Q99619 263 aa13.49□□□□□ -0.25
LINC01088-207ENST00000511241 A6NJR5 290 aa13.48□□□□□ -0.25
LINC01088-207ENST00000511241 MSS51Q4VC12 460 aa13.48□□□□□ -0.25
LINC01088-207ENST00000511241 TJAP1Q5JTD0 557 aa13.48□□□□□ -0.25
LINC01088-207ENST00000511241 MTMR14Q8NCE2 650 aa13.48□□□□□ -0.25
LINC01088-207ENST00000511241 PRM3Q9NNZ6 103 aa13.48□□□□□ -0.25
LINC01088-207ENST00000511241 RAD21O60216 631 aa13.47□□□□□ -0.25
LINC01088-207ENST00000511241 URB2Q14146 1524 aaKnown RBP13.45□□□□□ -0.26
LINC01088-207ENST00000511241 CCDC88BA6NC98 1476 aa13.45□□□□□ -0.26
LINC01088-207ENST00000511241 LYPD8Q6UX82 237 aa13.45□□□□□ -0.26
LINC01088-207ENST00000511241 ADH1BP00325 375 aa13.44□□□□□ -0.26
LINC01088-207ENST00000511241 JUNDP17535 347 aa13.44□□□□□ -0.26
LINC01088-207ENST00000511241 FAM160A2Q8N612 972 aaPredicted RBP13.43□□□□□ -0.26
LINC01088-207ENST00000511241 COG6Q9Y2V7 657 aa13.42□□□□□ -0.26
LINC01088-207ENST00000511241 LRRN4Q8WUT4 740 aa13.41□□□□□ -0.26
LINC01088-207ENST00000511241 CLUAP1Q96AJ1 413 aa13.41□□□□□ -0.26
LINC01088-207ENST00000511241 MMP16P51512 607 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms