RNA–Protein interactions for RNA: ENST00000511129.2

SCARB2-205, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-205ENST00000511129 Q6ZNB5 142 aa8.88□□□□□ -0.99
SCARB2-205ENST00000511129 NUTM2AQ8IVF1 878 aaPredicted RBP8.88□□□□□ -0.99
SCARB2-205ENST00000511129 PCDHB3Q9Y5E6 796 aa8.87□□□□□ -0.99
SCARB2-205ENST00000511129 ERICH6Q7L0X2 663 aa8.86□□□□□ -0.99
SCARB2-205ENST00000511129 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.86□□□□□ -0.99
SCARB2-205ENST00000511129 TIMELESSQ9UNS1 1208 aa8.86□□□□□ -0.99
SCARB2-205ENST00000511129 GUCA2AQ02747 115 aa8.85□□□□□ -0.99
SCARB2-205ENST00000511129 Q3C1V9 767 aa8.85□□□□□ -0.99
SCARB2-205ENST00000511129 PUS10Q3MIT2 529 aaKnown RBP8.85□□□□□ -0.99
SCARB2-205ENST00000511129 PRPF38BQ5VTL8 546 aaKnown RBP8.85□□□□□ -0.99
SCARB2-205ENST00000511129 NKX2-3Q8TAU0 364 aa8.85□□□□□ -0.99
SCARB2-205ENST00000511129 PRKD2Q9BZL6 878 aa8.85□□□□□ -0.99
SCARB2-205ENST00000511129 ZBTB3Q9H5J0 574 aa8.85□□□□□ -0.99
SCARB2-205ENST00000511129 PCDHB15Q9Y5E8 787 aa8.85□□□□□ -0.99
SCARB2-205ENST00000511129 C6orf229H3BNL8 230 aa8.84□□□□□ -0.99
SCARB2-205ENST00000511129 NR1I2O75469 434 aa8.84□□□□□ -0.99
SCARB2-205ENST00000511129 LAPTM4AQ15012 233 aa8.84□□□□□ -0.99
SCARB2-205ENST00000511129 MORN1Q5T089 497 aa8.84□□□□□ -0.99
SCARB2-205ENST00000511129 HLA-CQ95604 372 aa8.84□□□□□ -0.99
SCARB2-205ENST00000511129 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.84□□□□□ -0.99
SCARB2-205ENST00000511129 TTBK1Q5TCY1 1321 aaPredicted RBP8.83□□□□□ -1
SCARB2-205ENST00000511129 GFRA3O60609 400 aa8.83□□□□□ -1
SCARB2-205ENST00000511129 COPS2P61201 443 aa8.83□□□□□ -1
SCARB2-205ENST00000511129 MTMR2Q13614 643 aa8.83□□□□□ -1
SCARB2-205ENST00000511129 PCDHGC3Q9UN70 934 aa8.83□□□□□ -1
SCARB2-205ENST00000511129 SLC27A5Q9Y2P5 690 aa8.83□□□□□ -1
SCARB2-205ENST00000511129 SPDYE5A6NIY4 337 aa8.82□□□□□ -1
SCARB2-205ENST00000511129 LILRB3O75022 631 aa8.82□□□□□ -1
SCARB2-205ENST00000511129 HRCP23327 699 aa8.82□□□□□ -1
SCARB2-205ENST00000511129 RFC5P40937 340 aa8.81□□□□□ -1
SCARB2-205ENST00000511129 QPCTQ16769 361 aa8.81□□□□□ -1
SCARB2-205ENST00000511129 TMEM259Q4ZIN3 620 aa8.81□□□□□ -1
SCARB2-205ENST00000511129 PPP2R2DQ66LE6 453 aa8.81□□□□□ -1
SCARB2-205ENST00000511129 SCUBE3Q8IX30 993 aa8.81□□□□□ -1
SCARB2-205ENST00000511129 CABLES1Q8TDN4 633 aa8.81□□□□□ -1
SCARB2-205ENST00000511129 V9GY48 417 aaPredicted RBP8.81□□□□□ -1
SCARB2-205ENST00000511129 BLOC1S3Q6QNY0 202 aa8.8□□□□□ -1
SCARB2-205ENST00000511129 HOMEZQ8IX15 550 aa8.8□□□□□ -1
SCARB2-205ENST00000511129 LCE2BO14633 110 aa8.79□□□□□ -1
SCARB2-205ENST00000511129 ZPR1O75312 459 aa8.79□□□□□ -1
SCARB2-205ENST00000511129 FMNL1O95466 1100 aaPredicted RBP8.79□□□□□ -1
SCARB2-205ENST00000511129 FLIIQ13045 1269 aa8.79□□□□□ -1
SCARB2-205ENST00000511129 RTL5Q5HYW3 569 aaPredicted RBP8.78□□□□□ -1
SCARB2-205ENST00000511129 C14orf37Q86TY3 774 aa8.78□□□□□ -1
SCARB2-205ENST00000511129 TSC1Q92574 1164 aa8.78□□□□□ -1
SCARB2-205ENST00000511129 SALL2Q9Y467 1007 aaPredicted RBP8.78□□□□□ -1
SCARB2-205ENST00000511129 AP1G2O75843 785 aa8.77□□□□□ -1.01
SCARB2-205ENST00000511129 GGCXP38435 758 aa8.77□□□□□ -1.01
SCARB2-205ENST00000511129 RETREG3Q86VR2 466 aa8.77□□□□□ -1.01
SCARB2-205ENST00000511129 HELBQ8NG08 1087 aaPredicted RBP8.77□□□□□ -1.01
SCARB2-205ENST00000511129 SYMPKQ92797 1274 aaKnown RBP8.77□□□□□ -1.01
SCARB2-205ENST00000511129 NRG2O14511 850 aaPredicted RBP8.76□□□□□ -1.01
SCARB2-205ENST00000511129 BANK1Q8NDB2 785 aa8.76□□□□□ -1.01
SCARB2-205ENST00000511129 USB1Q9BQ65 265 aaKnown RBP8.76□□□□□ -1.01
SCARB2-205ENST00000511129 BRICD5Q6PL45 260 aa8.75□□□□□ -1.01
SCARB2-205ENST00000511129 TRAF7Q6Q0C0 670 aa8.75□□□□□ -1.01
SCARB2-205ENST00000511129 PRR7Q8TB68 274 aa8.75□□□□□ -1.01
SCARB2-205ENST00000511129 CCDC180Q9P1Z9 1646 aa8.75□□□□□ -1.01
SCARB2-205ENST00000511129 FBXO31Q5XUX0 539 aaPredicted RBP8.74□□□□□ -1.01
SCARB2-205ENST00000511129 RNF19BQ6ZMZ0 732 aa8.74□□□□□ -1.01
SCARB2-205ENST00000511129 SPSB2Q99619 263 aa8.74□□□□□ -1.01
SCARB2-205ENST00000511129 RANGAP1P46060 587 aaPredicted RBP8.72□□□□□ -1.01
SCARB2-205ENST00000511129 CFAP99D6REC4 459 aa8.71□□□□□ -1.02
SCARB2-205ENST00000511129 APBB1O00213 710 aa8.71□□□□□ -1.02
SCARB2-205ENST00000511129 TLL1O43897 1013 aa8.71□□□□□ -1.02
SCARB2-205ENST00000511129 THAP11Q96EK4 314 aa8.71□□□□□ -1.02
SCARB2-205ENST00000511129 RNF223E7ERA6 249 aa8.7□□□□□ -1.02
SCARB2-205ENST00000511129 USP17L8P0C7I0 530 aa8.7□□□□□ -1.02
SCARB2-205ENST00000511129 CTDSPL2Q05D32 466 aa8.7□□□□□ -1.02
SCARB2-205ENST00000511129 DESI1Q6ICB0 168 aa8.7□□□□□ -1.02
SCARB2-205ENST00000511129 PRM3Q9NNZ6 103 aa8.7□□□□□ -1.02
SCARB2-205ENST00000511129 PDZRN3Q9UPQ7 1066 aa8.7□□□□□ -1.02
SCARB2-205ENST00000511129 ADH1BP00325 375 aa8.69□□□□□ -1.02
SCARB2-205ENST00000511129 UBTFP17480 764 aaKnown RBP8.69□□□□□ -1.02
SCARB2-205ENST00000511129 MCM6Q14566 821 aa8.69□□□□□ -1.02
SCARB2-205ENST00000511129 SNRKQ9NRH2 765 aa8.69□□□□□ -1.02
SCARB2-205ENST00000511129 MSS51Q4VC12 460 aa8.68□□□□□ -1.02
SCARB2-205ENST00000511129 EMID1Q96A84 441 aaPredicted RBP8.68□□□□□ -1.02
SCARB2-205ENST00000511129 RAD21O60216 631 aa8.67□□□□□ -1.02
SCARB2-205ENST00000511129 JUNDP17535 347 aa8.67□□□□□ -1.02
SCARB2-205ENST00000511129 SLC19A1P41440 591 aa8.66□□□□□ -1.02
SCARB2-205ENST00000511129 MYT1Q01538 1121 aa8.66□□□□□ -1.02
SCARB2-205ENST00000511129 LYPD8Q6UX82 237 aa8.66□□□□□ -1.02
SCARB2-205ENST00000511129 FAM160A2Q8N612 972 aaPredicted RBP8.66□□□□□ -1.02
SCARB2-205ENST00000511129 SLC6A16Q9GZN6 736 aa8.66□□□□□ -1.02
SCARB2-205ENST00000511129 PPEF1O14829 653 aaPredicted RBP8.65□□□□□ -1.02
SCARB2-205ENST00000511129 S1PR4O95977 384 aa8.65□□□□□ -1.02
SCARB2-205ENST00000511129 TRIM67Q6ZTA4 783 aa8.65□□□□□ -1.02
SCARB2-205ENST00000511129 ANKLE1Q8NAG6 615 aa8.65□□□□□ -1.02
SCARB2-205ENST00000511129 ZMYND15Q9H091 742 aa8.65□□□□□ -1.02
SCARB2-205ENST00000511129 SOCS7O14512 581 aa8.64□□□□□ -1.03
SCARB2-205ENST00000511129 LRRN4Q8WUT4 740 aa8.64□□□□□ -1.03
SCARB2-205ENST00000511129 PER1O15534 1290 aaPredicted RBP8.63□□□□□ -1.03
SCARB2-205ENST00000511129 DXOO77932 396 aaKnown RBP8.63□□□□□ -1.03
SCARB2-205ENST00000511129 MMP16P51512 607 aa8.63□□□□□ -1.03
SCARB2-205ENST00000511129 PTPRNQ16849 979 aa8.63□□□□□ -1.03
SCARB2-205ENST00000511129 SPRYD7Q5W111 196 aa8.63□□□□□ -1.03
SCARB2-205ENST00000511129 MTMR14Q8NCE2 650 aa8.63□□□□□ -1.03
SCARB2-205ENST00000511129 CTHP32929 405 aa8.62□□□□□ -1.03
SCARB2-205ENST00000511129 LIAT1Q6ZQX7 453 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms