RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.08□□□□□ -0.64
SMAD1-209ENST00000511125 XPCQ01831 940 aaPredicted RBP11.08□□□□□ -0.64
SMAD1-209ENST00000511125 ANP32CO43423 234 aa11.08□□□□□ -0.64
SMAD1-209ENST00000511125 ABCC11Q96J66 1382 aa11.08□□□□□ -0.64
SMAD1-209ENST00000511125 SOX12O15370 315 aa11.07□□□□□ -0.64
SMAD1-209ENST00000511125 WASLO00401 505 aaPredicted RBP11.07□□□□□ -0.64
SMAD1-209ENST00000511125 NUDT16Q96DE0 195 aaKnown RBP11.06□□□□□ -0.64
SMAD1-209ENST00000511125 DDX17Q92841 729 aaKnown RBP11.06□□□□□ -0.64
SMAD1-209ENST00000511125 CDCA8Q53HL2 280 aa11.05□□□□□ -0.64
SMAD1-209ENST00000511125 FBLN1P23142 703 aa11.05□□□□□ -0.64
SMAD1-209ENST00000511125 NUTM2GQ5VZR2 741 aa11.05□□□□□ -0.64
SMAD1-209ENST00000511125 SETBP1Q9Y6X0 1596 aa11.05□□□□□ -0.64
SMAD1-209ENST00000511125 LMOD2Q6P5Q4 547 aa11.04□□□□□ -0.64
SMAD1-209ENST00000511125 CARD14Q9BXL6 1004 aa11.04□□□□□ -0.64
SMAD1-209ENST00000511125 KNSTRNQ9Y448 316 aa11.04□□□□□ -0.64
SMAD1-209ENST00000511125 ESCO1Q5FWF5 840 aa11.04□□□□□ -0.64
SMAD1-209ENST00000511125 CCDC184Q52MB2 194 aa11.04□□□□□ -0.64
SMAD1-209ENST00000511125 PRR36Q9H6K5 1346 aa11.04□□□□□ -0.64
SMAD1-209ENST00000511125 PAK3O75914 559 aaPredicted RBP11.03□□□□□ -0.64
SMAD1-209ENST00000511125 ORAI2Q96SN7 254 aa11.03□□□□□ -0.64
SMAD1-209ENST00000511125 MED14O60244 1454 aa11.03□□□□□ -0.64
SMAD1-209ENST00000511125 NGDNQ8NEJ9 315 aaKnown RBP11.03□□□□□ -0.64
SMAD1-209ENST00000511125 ZRANB1Q9UGI0 708 aa11.03□□□□□ -0.64
SMAD1-209ENST00000511125 SCAF1Q9H7N4 1312 aaKnown RBP11.03□□□□□ -0.64
SMAD1-209ENST00000511125 ZNF142P52746 1687 aaPredicted RBP11.02□□□□□ -0.64
SMAD1-209ENST00000511125 GGNBP2Q9H3C7 697 aa11.02□□□□□ -0.65
SMAD1-209ENST00000511125 TMEM94Q12767 1356 aa11.02□□□□□ -0.65
SMAD1-209ENST00000511125 QRICH2Q9H0J4 1663 aa11.02□□□□□ -0.65
SMAD1-209ENST00000511125 KIAA1210Q9ULL0 1709 aa11.02□□□□□ -0.65
SMAD1-209ENST00000511125 ARHGEF28Q8N1W1 1705 aaKnown RBP11.02□□□□□ -0.65
SMAD1-209ENST00000511125 FOXO3O43524 673 aa11.01□□□□□ -0.65
SMAD1-209ENST00000511125 KDM5AP29375 1690 aaKnown RBP11.01□□□□□ -0.65
SMAD1-209ENST00000511125 TULP4Q9NRJ4 1543 aa11□□□□□ -0.65
SMAD1-209ENST00000511125 ATF3P18847 181 aa11□□□□□ -0.65
SMAD1-209ENST00000511125 CCDC61Q9Y6R9 512 aa11□□□□□ -0.65
SMAD1-209ENST00000511125 SETD1AO15047 1707 aaKnown RBP11□□□□□ -0.65
SMAD1-209ENST00000511125 ZBTB7CA1YPR0 619 aa10.99□□□□□ -0.65
SMAD1-209ENST00000511125 PPM1GO15355 546 aaPredicted RBP10.99□□□□□ -0.65
SMAD1-209ENST00000511125 LAMC1P11047 1609 aa10.99□□□□□ -0.65
SMAD1-209ENST00000511125 PER1O15534 1290 aaPredicted RBP10.99□□□□□ -0.65
SMAD1-209ENST00000511125 FAM9BQ8IZU0 186 aa10.99□□□□□ -0.65
SMAD1-209ENST00000511125 PRKRIP1Q9H875 184 aaPredicted RBP10.99□□□□□ -0.65
SMAD1-209ENST00000511125 ACEP12821 1306 aa10.98□□□□□ -0.65
SMAD1-209ENST00000511125 HDGFL2Q7Z4V5 671 aaPredicted RBP10.98□□□□□ -0.65
SMAD1-209ENST00000511125 STRCQ7RTU9 1775 aa10.98□□□□□ -0.65
SMAD1-209ENST00000511125 PIP4K2BP78356 416 aa10.98□□□□□ -0.65
SMAD1-209ENST00000511125 PPIP5K1Q6PFW1 1433 aa10.98□□□□□ -0.65
SMAD1-209ENST00000511125 NME9Q86XW9 330 aa10.97□□□□□ -0.65
SMAD1-209ENST00000511125 C19orf44Q9H6X5 657 aa10.97□□□□□ -0.65
SMAD1-209ENST00000511125 TERF2IPQ9NYB0 399 aa10.97□□□□□ -0.65
SMAD1-209ENST00000511125 DMRT2Q9Y5R5 561 aa10.97□□□□□ -0.65
SMAD1-209ENST00000511125 POLR1AO95602 1720 aaPredicted RBP10.97□□□□□ -0.65
SMAD1-209ENST00000511125 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.97□□□□□ -0.65
SMAD1-209ENST00000511125 NSD3Q9BZ95 1437 aa10.97□□□□□ -0.65
SMAD1-209ENST00000511125 A0A1W2PP64 1363 aa10.97□□□□□ -0.65
SMAD1-209ENST00000511125 SLC24A1O60721 1099 aa10.96□□□□□ -0.65
SMAD1-209ENST00000511125 PSME1Q06323 249 aa10.96□□□□□ -0.65
SMAD1-209ENST00000511125 MRS2Q9HD23 443 aa10.96□□□□□ -0.65
SMAD1-209ENST00000511125 FAM135BQ49AJ0 1406 aa10.96□□□□□ -0.65
SMAD1-209ENST00000511125 MORC1Q86VD1 984 aa10.96□□□□□ -0.66
SMAD1-209ENST00000511125 SIRT1Q96EB6 747 aa10.96□□□□□ -0.66
SMAD1-209ENST00000511125 KTN1Q86UP2 1357 aaKnown RBP10.95□□□□□ -0.66
SMAD1-209ENST00000511125 TECPR2O15040 1411 aa10.95□□□□□ -0.66
SMAD1-209ENST00000511125 SBNO2Q9Y2G9 1366 aa10.95□□□□□ -0.66
SMAD1-209ENST00000511125 PHF8Q9UPP1 1060 aa10.95□□□□□ -0.66
SMAD1-209ENST00000511125 ATAD2Q6PL18 1390 aa10.95□□□□□ -0.66
SMAD1-209ENST00000511125 PIK3R4Q99570 1358 aa10.95□□□□□ -0.66
SMAD1-209ENST00000511125 AMER1Q5JTC6 1135 aaPredicted RBP10.94□□□□□ -0.66
SMAD1-209ENST00000511125 SALL2Q9Y467 1007 aaPredicted RBP10.94□□□□□ -0.66
SMAD1-209ENST00000511125 CHD2O14647 1828 aaKnown RBP10.93□□□□□ -0.66
SMAD1-209ENST00000511125 FYB1O15117 783 aa10.93□□□□□ -0.66
SMAD1-209ENST00000511125 DLC1Q96QB1 1528 aa10.93□□□□□ -0.66
SMAD1-209ENST00000511125 PTCH1Q13635 1447 aa10.92□□□□□ -0.66
SMAD1-209ENST00000511125 CPS1P31327 1500 aa10.92□□□□□ -0.66
SMAD1-209ENST00000511125 STRCP1A6NGW2 1772 aa10.92□□□□□ -0.66
SMAD1-209ENST00000511125 MSH6P52701 1360 aa10.92□□□□□ -0.66
SMAD1-209ENST00000511125 RRS1Q15050 365 aaKnown RBP10.92□□□□□ -0.66
SMAD1-209ENST00000511125 ABTB2Q8N961 1025 aa10.92□□□□□ -0.66
SMAD1-209ENST00000511125 CGNL1Q0VF96 1302 aa10.91□□□□□ -0.66
SMAD1-209ENST00000511125 NLRP6P59044 892 aa10.91□□□□□ -0.66
SMAD1-209ENST00000511125 SLAIN2Q9P270 581 aa10.91□□□□□ -0.66
SMAD1-209ENST00000511125 DIP2AQ14689 1571 aa10.91□□□□□ -0.66
SMAD1-209ENST00000511125 CABLES1Q8TDN4 633 aa10.91□□□□□ -0.66
SMAD1-209ENST00000511125 CADPS2Q86UW7 1296 aa10.9□□□□□ -0.66
SMAD1-209ENST00000511125 ANKRD36BQ8N2N9 1353 aa10.9□□□□□ -0.66
SMAD1-209ENST00000511125 RGPD8O14715 1765 aaPredicted RBP10.9□□□□□ -0.66
SMAD1-209ENST00000511125 ADGRL3Q9HAR2 1447 aa10.9□□□□□ -0.66
SMAD1-209ENST00000511125 XRN1Q8IZH2 1706 aaKnown RBP10.9□□□□□ -0.66
SMAD1-209ENST00000511125 ATP7BP35670 1465 aa10.9□□□□□ -0.67
SMAD1-209ENST00000511125 KRT28Q7Z3Y7 464 aa10.89□□□□□ -0.67
SMAD1-209ENST00000511125 PPP2R1AP30153 589 aa10.89□□□□□ -0.67
SMAD1-209ENST00000511125 TTC21BQ7Z4L5 1316 aa10.89□□□□□ -0.67
SMAD1-209ENST00000511125 MTHFSP49914 203 aa10.88□□□□□ -0.67
SMAD1-209ENST00000511125 LRRC7Q96NW7 1537 aa10.88□□□□□ -0.67
SMAD1-209ENST00000511125 NKTRP30414 1462 aaKnown RBP10.88□□□□□ -0.67
SMAD1-209ENST00000511125 PLEKHG3A1L390 1219 aa10.88□□□□□ -0.67
SMAD1-209ENST00000511125 UBAP1LF5GYI3 381 aa10.88□□□□□ -0.67
SMAD1-209ENST00000511125 COG3Q96JB2 828 aa10.88□□□□□ -0.67
SMAD1-209ENST00000511125 CD163L1Q9NR16 1453 aa10.88□□□□□ -0.67
SMAD1-209ENST00000511125 NALCNQ8IZF0 1738 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms