RNA–Protein interactions for RNA: ENST00000511092.5

CLCN3-207, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-207ENST00000511092 PROSER2Q86WR7 435 aaPredicted RBP10.88□□□□□ -0.67
CLCN3-207ENST00000511092 TNS1Q9HBL0 1735 aaKnown RBP10.88□□□□□ -0.67
CLCN3-207ENST00000511092 SCUBE2Q9NQ36 999 aa10.88□□□□□ -0.67
CLCN3-207ENST00000511092 PPP1R1BQ9UD71 204 aaPredicted RBP10.88□□□□□ -0.67
CLCN3-207ENST00000511092 ABCC3O15438 1527 aa10.88□□□□□ -0.67
CLCN3-207ENST00000511092 CAMSAP2Q08AD1 1489 aa10.87□□□□□ -0.67
CLCN3-207ENST00000511092 NCOA2Q15596 1464 aa10.87□□□□□ -0.67
CLCN3-207ENST00000511092 RGPD1P0DJD0 1748 aa10.87□□□□□ -0.67
CLCN3-207ENST00000511092 SAMD9Q5K651 1589 aa10.87□□□□□ -0.67
CLCN3-207ENST00000511092 SAMD9LQ8IVG5 1584 aa10.87□□□□□ -0.67
CLCN3-207ENST00000511092 TNS2Q63HR2 1409 aa10.87□□□□□ -0.67
CLCN3-207ENST00000511092 HSPA6P17066 643 aa10.87□□□□□ -0.67
CLCN3-207ENST00000511092 IRX5P78411 483 aaPredicted RBP10.87□□□□□ -0.67
CLCN3-207ENST00000511092 MYOM1P52179 1685 aa10.87□□□□□ -0.67
CLCN3-207ENST00000511092 ARHGAP23Q9P227 1491 aa10.87□□□□□ -0.67
CLCN3-207ENST00000511092 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.87□□□□□ -0.67
CLCN3-207ENST00000511092 NRKQ7Z2Y5 1582 aa10.86□□□□□ -0.67
CLCN3-207ENST00000511092 EN1Q05925 392 aaPredicted RBP10.85□□□□□ -0.67
CLCN3-207ENST00000511092 PNPLA6Q8IY17 1366 aa10.85□□□□□ -0.67
CLCN3-207ENST00000511092 SETD5Q9C0A6 1442 aa10.84□□□□□ -0.67
CLCN3-207ENST00000511092 LTKP29376 864 aa10.84□□□□□ -0.67
CLCN3-207ENST00000511092 NKTRP30414 1462 aaKnown RBP10.84□□□□□ -0.67
CLCN3-207ENST00000511092 RALGAPBQ86X10 1494 aa10.84□□□□□ -0.67
CLCN3-207ENST00000511092 NUP188Q5SRE5 1749 aa10.84□□□□□ -0.67
CLCN3-207ENST00000511092 MIA2Q96PC5 1412 aa10.84□□□□□ -0.67
CLCN3-207ENST00000511092 A2MP01023 1474 aa10.83□□□□□ -0.68
CLCN3-207ENST00000511092 PLCG2P16885 1265 aa10.83□□□□□ -0.68
CLCN3-207ENST00000511092 BAG6P46379 1132 aa10.83□□□□□ -0.68
CLCN3-207ENST00000511092 MARF1Q9Y4F3 1742 aaKnown RBP10.83□□□□□ -0.68
CLCN3-207ENST00000511092 PSEN1P49768 467 aa10.82□□□□□ -0.68
CLCN3-207ENST00000511092 PDAP1Q13442 181 aaKnown RBP10.82□□□□□ -0.68
CLCN3-207ENST00000511092 OCEL1Q9H607 264 aa10.81□□□□□ -0.68
CLCN3-207ENST00000511092 RREB1Q92766 1687 aa10.81□□□□□ -0.68
CLCN3-207ENST00000511092 INO80Q9ULG1 1556 aaPredicted RBP10.81□□□□□ -0.68
CLCN3-207ENST00000511092 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.81□□□□□ -0.68
CLCN3-207ENST00000511092 CFAP65Q6ZU64 1925 aaKnown RBP10.8□□□□□ -0.68
CLCN3-207ENST00000511092 ASXL1Q8IXJ9 1541 aa10.8□□□□□ -0.68
CLCN3-207ENST00000511092 ECM2O94769 699 aaPredicted RBP10.79□□□□□ -0.68
CLCN3-207ENST00000511092 KCNA6P17658 529 aa10.79□□□□□ -0.68
CLCN3-207ENST00000511092 PREX2Q70Z35 1606 aa10.79□□□□□ -0.68
CLCN3-207ENST00000511092 SLIT1O75093 1534 aa10.79□□□□□ -0.68
CLCN3-207ENST00000511092 BRINP3Q76B58 766 aa10.78□□□□□ -0.68
CLCN3-207ENST00000511092 PCNTO95613 3336 aa10.78□□□□□ -0.68
CLCN3-207ENST00000511092 GPATCH8Q9UKJ3 1502 aaKnown RBP10.78□□□□□ -0.68
CLCN3-207ENST00000511092 FNBP4Q8N3X1 1017 aaPredicted RBP10.77□□□□□ -0.69
CLCN3-207ENST00000511092 CHD2O14647 1828 aaKnown RBP10.77□□□□□ -0.69
CLCN3-207ENST00000511092 MROH1Q8NDA8 1641 aa10.76□□□□□ -0.69
CLCN3-207ENST00000511092 DDX17Q92841 729 aaKnown RBP10.76□□□□□ -0.69
CLCN3-207ENST00000511092 RIOK3O14730 519 aaKnown RBP10.75□□□□□ -0.69
CLCN3-207ENST00000511092 GOLGA2Q08379 1002 aa10.75□□□□□ -0.69
CLCN3-207ENST00000511092 EZH2Q15910 746 aaKnown RBP10.75□□□□□ -0.69
CLCN3-207ENST00000511092 FAM161AQ3B820 660 aa10.75□□□□□ -0.69
CLCN3-207ENST00000511092 GJD4Q96KN9 370 aaPredicted RBP10.75□□□□□ -0.69
CLCN3-207ENST00000511092 WWC3Q9ULE0 1092 aa10.75□□□□□ -0.69
CLCN3-207ENST00000511092 TET3O43151 1660 aa10.74□□□□□ -0.69
CLCN3-207ENST00000511092 MKRN3Q13064 507 aaKnown RBP10.74□□□□□ -0.69
CLCN3-207ENST00000511092 DNAJC5GQ8N7S2 189 aa10.74□□□□□ -0.69
CLCN3-207ENST00000511092 SPON1Q9HCB6 807 aa10.74□□□□□ -0.69
CLCN3-207ENST00000511092 CASZ1Q86V15 1759 aa10.73□□□□□ -0.69
CLCN3-207ENST00000511092 TXNDC2Q86VQ3 553 aa10.73□□□□□ -0.69
CLCN3-207ENST00000511092 PDCD7Q8N8D1 485 aaKnown RBP10.73□□□□□ -0.69
CLCN3-207ENST00000511092 WDR90Q96KV7 1748 aa10.72□□□□□ -0.69
CLCN3-207ENST00000511092 KIAA1210Q9ULL0 1709 aa10.72□□□□□ -0.69
CLCN3-207ENST00000511092 KCNQ2O43526 872 aa10.72□□□□□ -0.69
CLCN3-207ENST00000511092 FAM9AQ8IZU1 332 aaPredicted RBP10.72□□□□□ -0.69
CLCN3-207ENST00000511092 RNF25Q96BH1 459 aaPredicted RBP10.72□□□□□ -0.69
CLCN3-207ENST00000511092 SLC26A8Q96RN1 970 aa10.72□□□□□ -0.69
CLCN3-207ENST00000511092 SYCP2Q9BX26 1530 aa10.72□□□□□ -0.69
CLCN3-207ENST00000511092 GOLGB1Q14789 3259 aaKnown RBP10.71□□□□□ -0.7
CLCN3-207ENST00000511092 CDC42BPAQ5VT25 1732 aa10.7□□□□□ -0.7
CLCN3-207ENST00000511092 DISP2A7MBM2 1401 aa10.7□□□□□ -0.7
CLCN3-207ENST00000511092 PTCH1Q13635 1447 aa10.69□□□□□ -0.7
CLCN3-207ENST00000511092 VGFO15240 615 aaPredicted RBP10.69□□□□□ -0.7
CLCN3-207ENST00000511092 TAOK2Q9UL54 1235 aa10.69□□□□□ -0.7
CLCN3-207ENST00000511092 SEPT12Q8IYM1 358 aa10.68□□□□□ -0.7
CLCN3-207ENST00000511092 CABP2Q9NPB3 220 aa10.68□□□□□ -0.7
CLCN3-207ENST00000511092 COL22A1Q8NFW1 1626 aaPredicted RBP10.68□□□□□ -0.7
CLCN3-207ENST00000511092 SUPT5HO00267 1087 aaKnown RBP10.67□□□□□ -0.7
CLCN3-207ENST00000511092 LRRC59Q96AG4 307 aaKnown RBP10.67□□□□□ -0.7
CLCN3-207ENST00000511092 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.67□□□□□ -0.78e-7■■□□□ 12.5
CLCN3-207ENST00000511092 DLC1Q96QB1 1528 aa10.67□□□□□ -0.7
CLCN3-207ENST00000511092 ERVK-7P63135 1459 aa10.67□□□□□ -0.7
CLCN3-207ENST00000511092 ARHGAP35Q9NRY4 1499 aa10.67□□□□□ -0.7
CLCN3-207ENST00000511092 PIK3C2BO00750 1634 aa10.66□□□□□ -0.7
CLCN3-207ENST00000511092 SPAG9O60271 1321 aaKnown RBP10.66□□□□□ -0.7
CLCN3-207ENST00000511092 RGL2O15211 777 aa10.66□□□□□ -0.7
CLCN3-207ENST00000511092 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.65□□□□□ -0.7
CLCN3-207ENST00000511092 LCE2DQ5TA82 110 aaPredicted RBP10.65□□□□□ -0.7
CLCN3-207ENST00000511092 KRT27Q7Z3Y8 459 aa10.65□□□□□ -0.7
CLCN3-207ENST00000511092 SLAIN1Q8ND83 568 aa10.65□□□□□ -0.7
CLCN3-207ENST00000511092 ZFP91Q96JP5 570 aaPredicted RBP10.65□□□□□ -0.7
CLCN3-207ENST00000511092 ATP10DQ9P241 1426 aa10.65□□□□□ -0.7
CLCN3-207ENST00000511092 ADGRB2O60241 1585 aa10.65□□□□□ -0.71
CLCN3-207ENST00000511092 FAM182BQ5T319 152 aa10.64□□□□□ -0.71
CLCN3-207ENST00000511092 L3MBTL3Q96JM7 780 aaPredicted RBP10.64□□□□□ -0.71
CLCN3-207ENST00000511092 FAM83GA6ND36 823 aa10.63□□□□□ -0.71
CLCN3-207ENST00000511092 POTEMA6NI47 508 aa10.63□□□□□ -0.71
CLCN3-207ENST00000511092 CAMKK2Q96RR4 588 aa10.63□□□□□ -0.71
CLCN3-207ENST00000511092 LRRIQ1Q96JM4 1722 aa10.62□□□□□ -0.71
CLCN3-207ENST00000511092 C14orf37Q86TY3 774 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms