RNA–Protein interactions for RNA: ENST00000510576.6

CLMAT3-201, colorectal liver metastasis associated transcript 3, humanhuman

TSL 1 (best) BASIC

Gene CLMAT3, Length 1,973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-201ENST00000510576 CCDC146Q8IYE0 955 aa21.85■■□□□ 1.09
CLMAT3-201ENST00000510576 PPP6R1Q9UPN7 881 aa21.85■■□□□ 1.09
CLMAT3-201ENST00000510576 SHPRHQ149N8 1683 aa21.85■■□□□ 1.09
CLMAT3-201ENST00000510576 CGNL1Q0VF96 1302 aa21.84■■□□□ 1.09
CLMAT3-201ENST00000510576 DUSP27Q5VZP5 1158 aa21.83■■□□□ 1.09
CLMAT3-201ENST00000510576 FBXO31Q5XUX0 539 aaPredicted RBP21.83■■□□□ 1.09
CLMAT3-201ENST00000510576 ANKRD36BQ8N2N9 1353 aa21.83■■□□□ 1.09
CLMAT3-201ENST00000510576 PTPRMP28827 1452 aa21.81■■□□□ 1.08
CLMAT3-201ENST00000510576 NGEFQ8N5V2 710 aa21.81■■□□□ 1.08
CLMAT3-201ENST00000510576 STK26Q9P289 416 aa21.81■■□□□ 1.08
CLMAT3-201ENST00000510576 NSD2O96028 1365 aa21.8■■□□□ 1.08
CLMAT3-201ENST00000510576 APAF1O14727 1248 aa21.8■■□□□ 1.08
CLMAT3-201ENST00000510576 ALKQ9UM73 1620 aa21.8■■□□□ 1.08
CLMAT3-201ENST00000510576 SPATA31D1Q6ZQQ2 1576 aa21.8■■□□□ 1.08
CLMAT3-201ENST00000510576 NINLQ9Y2I6 1382 aa21.8■■□□□ 1.08
CLMAT3-201ENST00000510576 PLIN1O60240 522 aa21.79■■□□□ 1.08
CLMAT3-201ENST00000510576 YTHDC2Q9H6S0 1430 aaKnown RBP21.79■■□□□ 1.08
CLMAT3-201ENST00000510576 ARHGEF40Q8TER5 1519 aa21.79■■□□□ 1.08
CLMAT3-201ENST00000510576 SLFN5Q08AF3 891 aa21.79■■□□□ 1.08
CLMAT3-201ENST00000510576 CABP2Q9NPB3 220 aa21.79■■□□□ 1.08
CLMAT3-201ENST00000510576 STAG3Q9UJ98 1225 aa21.79■■□□□ 1.08
CLMAT3-201ENST00000510576 SAFB2Q14151 953 aaKnown RBP eCLIP21.78■■□□□ 1.08
CLMAT3-201ENST00000510576 TNNT2P45379 298 aaPredicted RBP21.77■■□□□ 1.08
CLMAT3-201ENST00000510576 SENP3Q9H4L4 574 aaPredicted RBP21.77■■□□□ 1.08
CLMAT3-201ENST00000510576 ANP32EQ9BTT0 268 aa21.76■■□□□ 1.07
CLMAT3-201ENST00000510576 TRMT2AQ8IZ69 625 aaKnown RBP21.75■■□□□ 1.07
CLMAT3-201ENST00000510576 CRBNQ96SW2 442 aa21.75■■□□□ 1.07
CLMAT3-201ENST00000510576 SRPK2P78362 688 aaKnown RBP21.74■■□□□ 1.07
CLMAT3-201ENST00000510576 ATAD2Q6PL18 1390 aa21.74■■□□□ 1.07
CLMAT3-201ENST00000510576 CFAP53Q96M91 514 aa21.74■■□□□ 1.07
CLMAT3-201ENST00000510576 POGKQ9P215 609 aa21.74■■□□□ 1.07
CLMAT3-201ENST00000510576 A2ML1A8K2U0 1454 aa21.74■■□□□ 1.07
CLMAT3-201ENST00000510576 NKTRP30414 1462 aaKnown RBP21.74■■□□□ 1.07
CLMAT3-201ENST00000510576 PRAM1Q96QH2 718 aa21.73■■□□□ 1.07
CLMAT3-201ENST00000510576 ANKRD26Q9UPS8 1709 aa21.73■■□□□ 1.07
CLMAT3-201ENST00000510576 E9PSI1 815 aa21.72■■□□□ 1.07
CLMAT3-201ENST00000510576 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.72■■□□□ 1.07
CLMAT3-201ENST00000510576 A0A1W2PP64 1363 aa21.71■■□□□ 1.07
CLMAT3-201ENST00000510576 MINK1Q8N4C8 1332 aaPredicted RBP21.71■■□□□ 1.07
CLMAT3-201ENST00000510576 SETD1AO15047 1707 aaKnown RBP21.71■■□□□ 1.07
CLMAT3-201ENST00000510576 ABCC11Q96J66 1382 aa21.71■■□□□ 1.07
CLMAT3-201ENST00000510576 MTHFSP49914 203 aa21.7■■□□□ 1.07
CLMAT3-201ENST00000510576 RIMS2Q9UQ26 1411 aa21.7■■□□□ 1.06
CLMAT3-201ENST00000510576 MSH5O43196 834 aa21.69■■□□□ 1.06
CLMAT3-201ENST00000510576 MLECQ14165 292 aa21.69■■□□□ 1.06
CLMAT3-201ENST00000510576 RUNDC1Q96C34 613 aa21.69■■□□□ 1.06
CLMAT3-201ENST00000510576 IQSEC2Q5JU85 1478 aa21.69■■□□□ 1.06
CLMAT3-201ENST00000510576 DLC1Q96QB1 1528 aa21.69■■□□□ 1.06
CLMAT3-201ENST00000510576 SPINK5Q9NQ38 1064 aaPredicted RBP21.68■■□□□ 1.06
CLMAT3-201ENST00000510576 C20orf194Q5TEA3 1177 aa21.67■■□□□ 1.06
CLMAT3-201ENST00000510576 TERF2IPQ9NYB0 399 aa21.67■■□□□ 1.06
CLMAT3-201ENST00000510576 KIF20BQ96Q89 1820 aa21.65■■□□□ 1.06
CLMAT3-201ENST00000510576 WWC1Q8IX03 1113 aa21.65■■□□□ 1.06
CLMAT3-201ENST00000510576 TCERG1O14776 1098 aaKnown RBP21.65■■□□□ 1.06
CLMAT3-201ENST00000510576 MED14O60244 1454 aa21.64■■□□□ 1.05
CLMAT3-201ENST00000510576 CD163L1Q9NR16 1453 aa21.64■■□□□ 1.05
CLMAT3-201ENST00000510576 ESF1Q9H501 851 aaKnown RBP21.63■■□□□ 1.05
CLMAT3-201ENST00000510576 DMRT2Q9Y5R5 561 aa21.63■■□□□ 1.05
CLMAT3-201ENST00000510576 CDK19Q9BWU1 502 aa21.62■■□□□ 1.05
CLMAT3-201ENST00000510576 HDGFL2Q7Z4V5 671 aaPredicted RBP21.61■■□□□ 1.05
CLMAT3-201ENST00000510576 TCP11L2Q8N4U5 519 aa21.61■■□□□ 1.05
CLMAT3-201ENST00000510576 NRXN3Q9Y4C0 1643 aa21.61■■□□□ 1.05
CLMAT3-201ENST00000510576 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.59■■□□□ 1.05
CLMAT3-201ENST00000510576 GGNBP2Q9H3C7 697 aa21.59■■□□□ 1.05
CLMAT3-201ENST00000510576 ADGRB2O60241 1585 aa21.59■■□□□ 1.05
CLMAT3-201ENST00000510576 ZMYM3Q14202 1370 aa21.59■■□□□ 1.05
CLMAT3-201ENST00000510576 ERICH6Q7L0X2 663 aa21.59■■□□□ 1.05
CLMAT3-201ENST00000510576 NLRP1Q9C000 1473 aa21.58■■□□□ 1.05
CLMAT3-201ENST00000510576 NEUROD2Q15784 382 aa21.58■■□□□ 1.05
CLMAT3-201ENST00000510576 RRP7AQ9Y3A4 280 aaKnown RBP21.58■■□□□ 1.05
CLMAT3-201ENST00000510576 U2AF1L5P0DN76 240 aaPredicted RBP21.57■■□□□ 1.04
CLMAT3-201ENST00000510576 MS4A1P11836 297 aa21.57■■□□□ 1.04
CLMAT3-201ENST00000510576 U2AF1Q01081 240 aaKnown RBP eCLIP21.57■■□□□ 1.04
CLMAT3-201ENST00000510576 PHF23Q9BUL5 403 aaPredicted RBP21.57■■□□□ 1.04
CLMAT3-201ENST00000510576 FYB1O15117 783 aa21.57■■□□□ 1.04
CLMAT3-201ENST00000510576 CCDC27Q2M243 656 aa21.57■■□□□ 1.04
CLMAT3-201ENST00000510576 WDR63Q8IWG1 891 aa21.57■■□□□ 1.04
CLMAT3-201ENST00000510576 KNDC1Q76NI1 1749 aa21.57■■□□□ 1.04
CLMAT3-201ENST00000510576 COL3A1P02461 1466 aaPredicted RBP21.56■■□□□ 1.04
CLMAT3-201ENST00000510576 NCBP3Q53F19 620 aaKnown RBP21.56■■□□□ 1.04
CLMAT3-201ENST00000510576 ATP7BP35670 1465 aa21.56■■□□□ 1.04
CLMAT3-201ENST00000510576 BCAR3O75815 825 aa21.56■■□□□ 1.04
CLMAT3-201ENST00000510576 WAPLQ7Z5K2 1190 aa21.54■■□□□ 1.04
CLMAT3-201ENST00000510576 CABP1Q9NZU7 370 aa21.54■■□□□ 1.04
CLMAT3-201ENST00000510576 KDM2BQ8NHM5 1336 aa21.54■■□□□ 1.04
CLMAT3-201ENST00000510576 CENPQQ7L2Z9 268 aaPredicted RBP21.54■■□□□ 1.04
CLMAT3-201ENST00000510576 TNRQ92752 1358 aa21.53■■□□□ 1.04
CLMAT3-201ENST00000510576 ANP32AP39687 249 aaKnown RBP21.53■■□□□ 1.04
CLMAT3-201ENST00000510576 UBR1Q8IWV7 1749 aa21.52■■□□□ 1.04
CLMAT3-201ENST00000510576 HDGFP51858 240 aaKnown RBP21.52■■□□□ 1.04
CLMAT3-201ENST00000510576 U2SURPO15042 1029 aaKnown RBP21.5■■□□□ 1.03
CLMAT3-201ENST00000510576 METP08581 1390 aa21.5■■□□□ 1.03
CLMAT3-201ENST00000510576 PDE4AP27815 886 aa21.49■■□□□ 1.03
CLMAT3-201ENST00000510576 PDE3AQ14432 1141 aa21.49■■□□□ 1.03
CLMAT3-201ENST00000510576 CANXP27824 592 aaKnown RBP21.48■■□□□ 1.03
CLMAT3-201ENST00000510576 CPS1P31327 1500 aa21.48■■□□□ 1.03
CLMAT3-201ENST00000510576 MYH16Q9H6N6 1097 aa21.48■■□□□ 1.03
CLMAT3-201ENST00000510576 FAM135BQ49AJ0 1406 aa21.47■■□□□ 1.03
CLMAT3-201ENST00000510576 BACH2Q9BYV9 841 aa21.47■■□□□ 1.03
CLMAT3-201ENST00000510576 TECPR2O15040 1411 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms