RNA–Protein interactions for RNA: ENST00000510224.5

PROM1-210, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PROM1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-210ENST00000510224 RGS17Q9UGC6 210 aaPredicted RBP11.38□□□□□ -0.59
PROM1-210ENST00000510224 ADGRL3Q9HAR2 1447 aa11.38□□□□□ -0.59
PROM1-210ENST00000510224 PLEKHH1Q9ULM0 1364 aa11.38□□□□□ -0.59
PROM1-210ENST00000510224 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.38□□□□□ -0.59
PROM1-210ENST00000510224 SETBP1Q9Y6X0 1596 aa11.38□□□□□ -0.59
PROM1-210ENST00000510224 C14orf93Q9H972 538 aaKnown RBP11.37□□□□□ -0.59
PROM1-210ENST00000510224 SPATA31E1Q6ZUB1 1445 aa11.37□□□□□ -0.59
PROM1-210ENST00000510224 NCOA3Q9Y6Q9 1424 aa11.37□□□□□ -0.59
PROM1-210ENST00000510224 PHLPP1O60346 1717 aa11.36□□□□□ -0.59
PROM1-210ENST00000510224 NRXN3Q9Y4C0 1643 aa11.36□□□□□ -0.59
PROM1-210ENST00000510224 MST1RQ04912 1400 aa11.36□□□□□ -0.59
PROM1-210ENST00000510224 PAK3O75914 559 aaPredicted RBP11.35□□□□□ -0.59
PROM1-210ENST00000510224 PSME1Q06323 249 aa11.35□□□□□ -0.59
PROM1-210ENST00000510224 SPATA31A6Q5VVP1 1343 aa11.34□□□□□ -0.59
PROM1-210ENST00000510224 YTHDC2Q9H6S0 1430 aaKnown RBP11.34□□□□□ -0.59
PROM1-210ENST00000510224 NPHP3Q7Z494 1330 aa11.34□□□□□ -0.59
PROM1-210ENST00000510224 C1orf167Q5SNV9 1468 aa11.34□□□□□ -0.59
PROM1-210ENST00000510224 LRPPRCP42704 1394 aaKnown RBP11.34□□□□□ -0.59
PROM1-210ENST00000510224 AFF2P51816 1311 aa11.34□□□□□ -0.59
PROM1-210ENST00000510224 CCDC9Q9Y3X0 531 aaKnown RBP11.33□□□□□ -0.6
PROM1-210ENST00000510224 ZNF772Q68DY9 489 aaPredicted RBP11.33□□□□□ -0.6
PROM1-210ENST00000510224 NGDNQ8NEJ9 315 aaKnown RBP11.33□□□□□ -0.6
PROM1-210ENST00000510224 CABLES1Q8TDN4 633 aa11.33□□□□□ -0.6
PROM1-210ENST00000510224 A0A0G2JS52 829 aa11.32□□□□□ -0.6
PROM1-210ENST00000510224 MYT1Q01538 1121 aa11.32□□□□□ -0.6
PROM1-210ENST00000510224 KRT28Q7Z3Y7 464 aa11.32□□□□□ -0.6
PROM1-210ENST00000510224 PHF8Q9UPP1 1060 aa11.32□□□□□ -0.6
PROM1-210ENST00000510224 RXRBP28702 533 aa11.32□□□□□ -0.6
PROM1-210ENST00000510224 QTRT2Q9H974 415 aaKnown RBP11.32□□□□□ -0.6
PROM1-210ENST00000510224 DCCP43146 1447 aa11.31□□□□□ -0.6
PROM1-210ENST00000510224 ABCC11Q96J66 1382 aa11.31□□□□□ -0.6
PROM1-210ENST00000510224 ASXL1Q8IXJ9 1541 aa11.31□□□□□ -0.6
PROM1-210ENST00000510224 PPLO60437 1756 aa11.31□□□□□ -0.6
PROM1-210ENST00000510224 PTCH1Q13635 1447 aa11.31□□□□□ -0.6
PROM1-210ENST00000510224 NBPF1Q3BBV0 1214 aa11.31□□□□□ -0.6
PROM1-210ENST00000510224 PIK3C2GO75747 1445 aa11.31□□□□□ -0.6
PROM1-210ENST00000510224 XRN1Q8IZH2 1706 aaKnown RBP11.3□□□□□ -0.6
PROM1-210ENST00000510224 NUTM2GQ5VZR2 741 aa11.29□□□□□ -0.6
PROM1-210ENST00000510224 USP21Q9UK80 565 aa11.29□□□□□ -0.6
PROM1-210ENST00000510224 SRPK2P78362 688 aaKnown RBP11.29□□□□□ -0.6
PROM1-210ENST00000510224 ZBTB7CA1YPR0 619 aa11.28□□□□□ -0.6
PROM1-210ENST00000510224 NALCNQ8IZF0 1738 aa11.28□□□□□ -0.6
PROM1-210ENST00000510224 LRP6O75581 1613 aa11.28□□□□□ -0.6
PROM1-210ENST00000510224 PNPLA6Q8IY17 1366 aa11.27□□□□□ -0.6
PROM1-210ENST00000510224 POLR3GLQ9BT43 218 aa11.27□□□□□ -0.61
PROM1-210ENST00000510224 CARD11Q9BXL7 1154 aa11.27□□□□□ -0.61
PROM1-210ENST00000510224 COL16A1Q07092 1604 aaPredicted RBP11.27□□□□□ -0.61
PROM1-210ENST00000510224 SOS2Q07890 1332 aaPredicted RBP11.27□□□□□ -0.61
PROM1-210ENST00000510224 NBPF8Q3BBV2 869 aa11.25□□□□□ -0.61
PROM1-210ENST00000510224 ROCK2O75116 1388 aaKnown RBP11.25□□□□□ -0.61
PROM1-210ENST00000510224 WASLO00401 505 aaPredicted RBP11.25□□□□□ -0.61
PROM1-210ENST00000510224 CDK19Q9BWU1 502 aa11.25□□□□□ -0.61
PROM1-210ENST00000510224 GPRASP1Q5JY77 1395 aa11.24□□□□□ -0.61
PROM1-210ENST00000510224 NUDT16Q96DE0 195 aaKnown RBP11.24□□□□□ -0.61
PROM1-210ENST00000510224 STAC3Q96MF2 364 aa11.24□□□□□ -0.61
PROM1-210ENST00000510224 CABP2Q9NPB3 220 aa11.23□□□□□ -0.61
PROM1-210ENST00000510224 SOX12O15370 315 aa11.23□□□□□ -0.61
PROM1-210ENST00000510224 RBM6P78332 1123 aaKnown RBP11.23□□□□□ -0.61
PROM1-210ENST00000510224 AHDC1Q5TGY3 1603 aaPredicted RBP11.23□□□□□ -0.61
PROM1-210ENST00000510224 TRPC5Q9UL62 973 aaPredicted RBP11.22□□□□□ -0.61
PROM1-210ENST00000510224 MYOM2P54296 1465 aa11.22□□□□□ -0.61
PROM1-210ENST00000510224 SIRT1Q96EB6 747 aa11.22□□□□□ -0.61
PROM1-210ENST00000510224 SPATA31A3Q5VYP0 1347 aa11.21□□□□□ -0.61
PROM1-210ENST00000510224 ZC3H6P61129 1189 aaKnown RBP11.21□□□□□ -0.61
PROM1-210ENST00000510224 USP35Q9P2H5 1018 aa11.21□□□□□ -0.61
PROM1-210ENST00000510224 TECPR2O15040 1411 aa11.21□□□□□ -0.61
PROM1-210ENST00000510224 PRR36Q9H6K5 1346 aa11.21□□□□□ -0.62
PROM1-210ENST00000510224 SETD1AO15047 1707 aaKnown RBP11.21□□□□□ -0.62
PROM1-210ENST00000510224 CENPJQ9HC77 1338 aaPredicted RBP11.21□□□□□ -0.62
PROM1-210ENST00000510224 PRDM11Q9NQV5 511 aa11.19□□□□□ -0.62
PROM1-210ENST00000510224 STRN4Q9NRL3 753 aa11.19□□□□□ -0.62
PROM1-210ENST00000510224 SRCAPQ6ZRS2 3230 aa11.19□□□□□ -0.62
PROM1-210ENST00000510224 CLSPNQ9HAW4 1339 aa11.19□□□□□ -0.62
PROM1-210ENST00000510224 CHRNA2Q15822 529 aa11.19□□□□□ -0.62
PROM1-210ENST00000510224 ABTB2Q8N961 1025 aa11.19□□□□□ -0.62
PROM1-210ENST00000510224 TMC1Q8TDI8 760 aa11.19□□□□□ -0.62
PROM1-210ENST00000510224 CCDC61Q9Y6R9 512 aa11.19□□□□□ -0.62
PROM1-210ENST00000510224 PRAG1Q86YV5 1406 aa11.18□□□□□ -0.62
PROM1-210ENST00000510224 CDC42BPGQ6DT37 1551 aa11.18□□□□□ -0.62
PROM1-210ENST00000510224 IFT172Q9UG01 1749 aa11.18□□□□□ -0.62
PROM1-210ENST00000510224 BTG4Q9NY30 223 aa11.17□□□□□ -0.62
PROM1-210ENST00000510224 ACEP12821 1306 aa11.17□□□□□ -0.62
PROM1-210ENST00000510224 NRXN1Q9ULB1 1477 aa11.17□□□□□ -0.62
PROM1-210ENST00000510224 CABP1Q9NZU7 370 aa11.17□□□□□ -0.62
PROM1-210ENST00000510224 NHSL1Q5SYE7 1610 aa11.16□□□□□ -0.62
PROM1-210ENST00000510224 EVA1CP58658 441 aa11.16□□□□□ -0.62
PROM1-210ENST00000510224 UNC5CLQ8IV45 518 aa11.16□□□□□ -0.62
PROM1-210ENST00000510224 GJD4Q96KN9 370 aaPredicted RBP11.16□□□□□ -0.62
PROM1-210ENST00000510224 RGPD8O14715 1765 aaPredicted RBP11.16□□□□□ -0.62
PROM1-210ENST00000510224 EIF3AQ14152 1382 aaKnown RBP11.16□□□□□ -0.62
PROM1-210ENST00000510224 UPF1Q92900 1129 aaKnown RBP eCLIP11.15□□□□□ -0.62
PROM1-210ENST00000510224 ST20-MTHFSA0A0A6YYL1 179 aa11.15□□□□□ -0.62
PROM1-210ENST00000510224 FAM83GA6ND36 823 aa11.15□□□□□ -0.62
PROM1-210ENST00000510224 FNBP4Q8N3X1 1017 aaPredicted RBP11.15□□□□□ -0.62
PROM1-210ENST00000510224 SHPRHQ149N8 1683 aa11.15□□□□□ -0.62
PROM1-210ENST00000510224 PXDNQ92626 1479 aa11.14□□□□□ -0.63
PROM1-210ENST00000510224 FAM98CQ17RN3 349 aaKnown RBP11.14□□□□□ -0.63
PROM1-210ENST00000510224 TNS3Q68CZ2 1445 aa11.14□□□□□ -0.63
PROM1-210ENST00000510224 ARHGEF10O15013 1369 aa11.14□□□□□ -0.63
PROM1-210ENST00000510224 ADGRB1O14514 1584 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms